Megalobrama amblycephala (Wuchang bream): 125255111
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Entry
125255111 CDS
T08212
Symbol
vclb
Name
(RefSeq) vinculin b isoform X1
KO
K05700
vinculin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04510
Focal adhesion
mamb04520
Adherens junction
mamb04810
Regulation of actin cytoskeleton
mamb04820
Cytoskeleton in muscle cells
mamb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125255111 (vclb)
04520 Adherens junction
125255111 (vclb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125255111 (vclb)
04810 Regulation of actin cytoskeleton
125255111 (vclb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125255111 (vclb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125255111 (vclb)
04147 Exosome [BR:
mamb04147
]
125255111 (vclb)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125255111 (vclb)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125255111 (vclb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
125255111
NCBI-ProteinID:
XP_048026045
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All DBs
Position
LG20:complement(31911807..31953317)
Genome browser
AA seq
1091 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMRRDMPPAFIKVENACTKLVQAAQMLKADPYSVQARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTRTSQGKGVEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWANKDTEAMKRALALIDSKMAQAKNWLRDPHAQPGDAGEQAIR
QILDEAGKVGELCAGKERRDIVGTAKTLGQITEQVSEMRARGQGASPVAMQKAQQVSQGL
DVLTGKVENAARKLEAMTGSKQAIAKRIDAAQSWLADPHGGPEGEENIKALLGEARKIAD
LCEDPKEREDILRNMGEIVGLTAKLSELKKAGKGDTPEARALAKQIATALQNLQSKTSKA
VANTRPAKAAVHLEGKIEQAQRWIDNPTLDDSGVGQAAIRGLVAEGRRLANALPASQRHE
LLGKCEEVEHLMAQLAELAARGEGDGPQARAIAQQLQDTLKELKGKMQEAMTQEVSDIFS
DTTTPVKLLAVAATAPPDAPNREEVFEERAANFENHAGRLGATAEKAAAVGTANKSTVEG
IQAAVKSARDLTPQVISAARILLKNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTR
SLLDASEEAIKKDLDKCQVAMANHQPQMLVAGATSIARRANRIMLVAKREVENSEDPKFR
ETVKAASDELSRTISPMVMDAKAVAANIQDQGLQRGFLDSGFKILGAVAKVREVFQPQEP
DFPPPPPPDLEHLQISDNAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQQAGEMVSEPMM
VAARQLHDEARKWSSKVSLVESCRMGSYPCGLLNNVCFLQGNDIIGAAKRMALLMAEMSR
LVRGSGGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQL
KILSTVKATMLGRTNISEEESEQATEMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFT
LRWVRKTPWYQ
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacacgaagacgatagagagtatcctggagccggtggctcagcagatc
tctcatctggtcatcatgcatgaggagggagaggtggacgggaaagccatcccggatctc
accgctcctgtagccgctgtgcaggcagctgtcagcaacctggtccgggtgggcaaagag
acggttcagaccaccgaggatgccatcatgaggagagacatgcctcctgcctttatcaag
gttgagaatgcatgcactaaactggtgcaggccgctcagatgttgaaggccgacccgtat
tctgtccaagccagagattatctgatcgacggttcccgcgggatcctctccggcacctct
gacctgctgctgacgtttgatgaggccgaggtccgtaaaatcatccgtgtgtgtaaaggg
attctggagtatctgacagtcgctgaggtggtggagtcgatggaagatctgattacttac
accaagaacctgggaccaggcatgacaaagatggccaagatgattgacgagcgacagcag
gagttaactcatcaggagcacagagtcatgctggtcaactccatgaacaccgtgaaggag
ctgctgcccgttctcatctcaggcattaagatcttcgtaacgaccaggacgtctcagggg
aaaggtgtggaggaggcgctgaagaacaggaacttcaccgtagagaagatgagcacagag
atcaatgagatcatccgcgtgctgcagctcacgtcctgggacgaggacgcctgggccaat
aaggacaccgaggccatgaagagagcgctggctctgatcgactccaaaatggcccaggcg
aagaactggctccgagacccgcacgcccagccaggtgacgcaggcgaacaggccattcgt
cagatcctggacgaggcgggtaaagttggtgaactctgtgctgggaaagagagacgagac
attgtgggaacagccaaaacacttggacagatcacggagcaggtgtccgagatgcgggcc
aggggtcagggcgcgagtccagtggccatgcagaaagcacagcaggtgtctcagggtttg
gacgtcctgacggggaaagtggaaaatgcggcacgtaaattggaggccatgaccggctcg
aaacaagccatcgccaagagaatcgacgccgctcagagctggctggcggaccctcacgga
ggtccggagggagaggagaacatcaaggctcttctgggagaagcgaggaagatcgcagat
ctctgcgaagatcccaaagagagagaggacatcctgcgcaacatgggcgagatcgtgggt
ctcaccgccaaactctccgagctcaagaaagcaggtaagggcgatacccctgaggctcga
gcgctggccaagcagatcgccacagctctgcagaaccttcagtccaaaaccagcaaagcc
gtggccaacactcgcccggccaaagcagccgttcacctggagggaaagatcgagcaggct
cagagatggatcgacaaccccacgctggacgacagcggagtcggtcaggctgctattcgt
gggctggttgccgaggggcgtcgcctggccaatgcgttgccggcgtctcagaggcacgag
ctgctgggtaaatgtgaggaggtggagcatctgatggctcagttagccgagctggcggcc
cgcggagagggagacggtccacaggcccgcgccatcgctcaacagctgcaggacactctc
aaagagctgaagggtaaaatgcaggaagccatgacacaggaagtgtctgacatcttcagt
gacacgaccacaccggtcaaactattggccgtagcagcgacggcccctccagacgcgccc
aacagagaggaggtgtttgaggagcgggccgcgaactttgagaatcacgcgggccgtctg
ggcgccacagcggagaaggcagccgccgtcggcacggccaacaagagcacggtggaggga
atccaggccgccgtcaaatcggccagagatctgacgccacaggtcatctccgctgctcga
atcctcctgaagaatcctggaaaccaggcggcttacgagcactttgagaccatgaagaat
cagtggatcgacaatgttgagaaaatgacaggtctggtggatgaagcgattgacaccagg
tctctgttggatgcatcagaagaagccattaagaaagatctggacaagtgtcaggtagct
atggccaatcaccagcctcagatgctggtcgccggggcaaccagcatcgcccgacgagcc
aatcggatcatgctggtggcaaaacgagaggtggagaactcagaggacccgaagttcaga
gaaactgtgaaagcggcttccgacgagctcagcagaaccatctcaccgatggtcatggac
gccaaggccgtggccgccaacatacaggaccaaggccttcagaggggcttcctggactct
ggatttaagatcctgggtgccgtggctaaagtcagagaggtgttccagccacaggagcca
gacttccctcctcctcctcctccagacctggagcacctgcagataagcgacaatgccgcc
ccgccaaaaccgcccctgccggagggtgaagtgcctcctcccagacctccaccgcctgag
gagaaggacgaggagttccccgagcagcaggctggagaaatggtcagcgaacccatgatg
gtggccgcccgacagctgcacgacgaggcccgcaagtggtccagcaaggtcagtctcgtt
gagtcttgcagaatgggttcgtatccatgtgggttattaaacaatgtttgttttttgcag
ggtaatgacatcatcggtgccgctaagcgcatggctctgctgatggccgagatgtctcga
ctggtccgaggaagcggcgggaataagagggcgctcatccagtgtgccaaagacatcgcc
aaagcctccgacgaggtcacgcgcctcgccaaggaggtcgccaagcagtgcacggacaaa
cgcatacgaaccaacctgctgcaggtgtgtgagaggattcctaccatcagcacacagctg
aagattctctccactgtgaaggccaccatgttgggacgcaccaacatcagtgaggaggaa
tcggagcaggccacagagatgctggtccataatgctcagaacctgatgcagtccgtgaag
gagacggtgagggaagccgaggccgcgtccatcaagatccgcacagatgccggattcacc
ctgcgctgggtccgcaagacaccctggtaccagtga
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