Megalobrama amblycephala (Wuchang bream): 125255273
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Entry
125255273 CDS
T08212
Symbol
thbs2b
Name
(RefSeq) thrombospondin-2
KO
K04659
thrombospondin 2/3/4/5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04145
Phagosome
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125255273 (thbs2b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125255273 (thbs2b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125255273 (thbs2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125255273 (thbs2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125255273 (thbs2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125255273 (thbs2b)
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125255273 (thbs2b)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Phagocytosis
Opsonins
125255273 (thbs2b)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125255273 (thbs2b)
Exosomal proteins of colorectal cancer cells
125255273 (thbs2b)
Exosomal proteins of bladder cancer cells
125255273 (thbs2b)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125255273 (thbs2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_CCN
TSP1_ADAMTS
Laminin_G_3
cEGF
DUF3972
Motif
Other DBs
NCBI-GeneID:
125255273
NCBI-ProteinID:
XP_048026309
LinkDB
All DBs
Position
LG20:complement(21106235..21122740)
Genome browser
AA seq
1181 aa
AA seq
DB search
MILRRCLRILALLLLFTSVKSQDAQLEDETVFDLFETSGISRKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSSALQQLLLQIQNNEGFILTATLRQDRTSRGTILALEGPGERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNVTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLSATGGRMFVAKGSTRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPVEAN
VVSESIEELEVPSSIASNVIGQNTDVPATSSSEMMCERSCEELANLFQELKGLRVVVSNL
IDGLQKVTEENTAMKEALNKMQNLSEQSMCWQDGRMFEDKEDWIVDSCTKCTCQEGKVVC
RQITCPPVACANPSFIDGECCPVCLPMDSEDGWSPWSEWTQCTVTCGSGTQQRGRSCDDT
SNTCSGPSIQTRKCSLGKCDRRVRQDGGWSLWSPWSSCSVTCGEGLITRIRHCNAPVPQR
GGKDCEGDGRETQSCHADPCPIDGGWGPWSPWALCSATCGGGLKSRVRECNSPEPQHGGR
KCLGDSIENEVCNRQECPIDGCLSNPCFSGVECSTASDGSWECGPCPNGYRGNGTSCEDV
NECDMVSDLCHKVGGQQQCVNTDPGFHCLPCPPRYKGTQPYGMGVESAKTNKQVCEPYNP
CKDNSHSCHKYAECIFLTHFSDPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLVCGANA
TYHCKKDNCPTLPNSGQEDYDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDD
VGDRCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNERDNCPLIYNTDQKDTDLDGV
GDQCDNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYIANANQADHDGDG
KGDACDYDDDNDGIPDDRDNCRLVPNKDQLDSDGDGRGDACENDFDNDNVPDIFDACPEN
SDISITDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFS
GTFYVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEDKPSKAFGISGVSLKVVNST
TGTGENLRNALWHTGNTKQQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGK
QIMADSGPIYDKTFAGGRLGLFVFSQEAVFFSDLKYECRDN
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgattctccgaagatgtctcagaatattggcccttttgcttctgttcacctctgtaaaa
tctcaagatgcgcaactggaagacgagacagtttttgacttgtttgaaaccagtgggatc
tcacgcaagactatcggtgtgaagcttttcaagggtctggacagcgatgctcctgcatac
cgcttcatccgatttgaccagctcccttccgtcagctcctcagcgctgcaacaacttctt
ttgcaaatacaaaacaatgaaggctttattctgacagccactctacgtcaggaccgcaca
tcccgtggcaccatccttgcactggaaggccccggagagcgcaggcagtttgaggtcgtt
tcggatggccgaaccaacactctagatttggtgtactggtgggccgatggctcacgcaac
gtgatctcatttgaggatgtagacctctcggattcgcaatggaagaatgtaacgctctat
gtgcatggagagacggcaactttgtacattggttgtggactcattgatagcttcattctc
gatgaacctttctatgaacacctgagcgccactggtggccgtatgtttgtggccaaaggg
tccacccgagaaagccattttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagtggaggcgaat
gtagtcagtgagagcatagaggagttggaggttccatcttcaattgcttccaatgtgatt
ggccagaatacagatgttccagcaaccagctcctcagaaatgatgtgtgaacgttcctgt
gaagaactggccaacctcttccaggagctcaagggtctcagagttgtcgttagcaacctc
atagatggtctgcagaaagtgacagaagaaaacacagcaatgaaggaggcactgaataag
atgcagaatctttcagagcagagtatgtgttggcaagatggccgtatgtttgaggacaaa
gaggactggattgtggatagttgcactaaatgtacctgccaagaaggaaaagttgtttgt
cgtcagattacatgtcctccagtggcatgtgccaacccatccttcatcgatggtgaatgc
tgtccagtttgccttccaatggacagtgaggacggctggtctccatggtcagagtggact
cagtgcacagtcacgtgtgggagcggcactcaacagagggggcgctcttgtgatgacaca
agcaatacatgttctggaccctcgattcagactcgcaagtgcagtttgggaaaatgtgac
cgaagagttcgtcaggatggtggctggagcttatggtctccctggtcgtcctgctcagtg
acatgtggagaggggctgatcacacgtatccgtcactgcaatgcacctgttccacaaaga
ggtggcaaagactgtgaaggtgatggacgggagactcagagctgccacgcagacccctgt
ccgattgatggtggctggggtccatggtctccctgggcattgtgttcagctacatgtgga
ggcggtctgaagagtcgtgttagagagtgtaacagccccgaaccacagcatggaggaagg
aagtgtcttggagactccattgaaaatgaagtatgcaaccggcaggagtgtccaattgat
ggctgtctttcgaacccttgcttctctggggtcgagtgtagcacagcttctgatggatcc
tgggaatgtgggccctgcccgaatggttatcgtggcaatggaacttcttgtgaagatgtc
aatgagtgtgatatggtttcagatctatgtcataaggtgggtggccaacagcaatgtgtg
aacacagaccctggattccactgtctcccctgccccccacgttacaaaggaactcagccc
tacggcatgggagtggagtcagctaaaaccaacaaacaggtttgtgaaccctacaacccc
tgtaaagacaacagccacagttgccacaagtatgctgaatgcatcttcctgactcacttc
agtgacccgatgtacaagtgtgagtgccgtattggttatgctggagacggcatcatctgt
ggagaggactttgatctggatggatggccaaaccaggatcttgtgtgtggagcaaatgcc
acctaccattgcaaaaaggacaattgcccgactctacctaactctggtcaggaggactat
gacaatgatgggcaaggagatgcttgtgataaagatgatgataacgatgaaattgtggat
gaaagggacaactgccccctgatgtataaccccaggcagtatgactatgacaaggatgat
gtcggagaccgttgtgacaactgcccatatgagcacaaccctgctcagaccgacaccgac
aacaatggagaaggagacgcctgttctattgatatggatggagatgagattctaaacgag
cgagacaactgccctctcatttacaacacagaccagaaagacacagatttagatggtgtc
ggagaccagtgtgataactgccccttagtccacaacccacaacagacggatgcagataat
gatttaattggagaccagtgtgatgacaaccaggacatagatgaagatggccatcagaat
aacatggataactgcccatacatagccaatgctaaccaagccgaccacgacggagacggg
aaaggagatgcttgtgattatgacgatgataatgatggcattcctgatgaccgtgataac
tgtagactagttcccaacaaggaccaactggactctgatggtgatggtcgtggtgacgcc
tgcgagaatgactttgataatgacaatgtcccggatatctttgacgcgtgcccggaaaac
agcgacatcagcatcacagacttccggaagtttcaaatggttcacctcgaccccaaggga
accacgcagatcgatcccaactgggtggtccgaaaccagggcaaagagcttgtgcagact
gccaactccgacccaggcattgcagtgggctttgatgagttcagcgctgtggatttcagc
gggaccttctacgtgaatacagacagagatgatgactatgcaggttttgtgtttggatac
cagtctagccgacgtttttacgtagtaatgtggaaacagatcacgcagacgtactgggaa
gacaagccgtcaaaggcgtttggcatctctggcgtctctctcaaggtggtcaactccacc
acaggcactggggaaaatctccgcaatgcattatggcacacaggcaacaccaagcaacag
gtgcgcactctttggcatgacccgaagaacatcggctggaaagactatactgcctaccgc
tggcatctcatccacagaccaaagactggcttcattagggttgttgtgtatgaaggcaag
cagatcatggcagactcgggtcccatttatgacaagacgtttgcaggtggaagactcggg
ttattcgttttctcccaggaggccgtcttcttctctgacctcaaatatgaatgcagagat
aattga
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integrated database retrieval system
