Megalobrama amblycephala (Wuchang bream): 125255438
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Entry
125255438 CDS
T08212
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03020
RNA polymerase
mamb04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125255438 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125255438 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125255438 (polr3a)
Enzymes [BR:
mamb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125255438 (polr3a)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
125255438 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
125255438
NCBI-ProteinID:
XP_048026620
LinkDB
All DBs
Position
LG20:34717250..34753595
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AA seq
1402 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYLDLELPCFHIGYFKAIVGILQMICKTCSHILLAKE
EKLQFLDYLRRPGLAYLQKRGLKKKISDKCRKKTVCANCNAFNGPVKKCGLLKIIHEKYK
TTKKVIDPMVSDFLQSFDVAIEHNKEVESLLTRAQENLNPLVVLNLFRRIPNEDVPLLLM
NPESGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMSG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANIELMRKLVRNGPDLHPGANF
IQQRHMQMKRFLKYGNREKMAQELKYGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALILMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRTKACQIVASILVGKDEKIKISLPHPAILKPIRLWTGKQI
FSLILKPSKSCPVKANLRTKGKQYCGKGEDLCSNDSFVVIQNSELMCGSMDKGTLGSGSK
NNIFYILLRDWGQQEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQELLDDG
YKKCDEYIEALKTGRLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVFGCPGEPALSRNELVLTTDSIMKRKDFLC
CKDTFLEALTDTGSEKYLQEIRKFIKTISERIKKTRDKYGINDNGTTEPKVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIISANLDTDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDIAVHGEAVVCVSPRENSKSSMYYV
LQSLKQLLPKVVVQGIPEVARAVIHIDEQSGKQKFKLLVEGDNLRAVMATHGVNGNRTTS
NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHSATK
DPNPPRRPLLFDNPDFHIPLAP
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacggatgtggccaaaaagataagtcacatctgtttt
ggcatgaaatcagcagagcagatgagacaacaggctcacattcaggtggtcagcaagaac
ctctacagccaagacaccagccacacaccgctgcagtatggagtcctggaccaccgcatg
ggtaccagcgagaaggacagaccgtgtgaaacctgtgggaagaaccttgctgactgtctc
ggacactacggatatctggatctggagctgccctgctttcatatcggatactttaaagct
attgttgggatcctgcagatgatctgtaagacgtgttctcacatccttctcgccaaagag
gaaaagcttcagtttctggattacttgcgtagacctggactggcgtatctgcagaagcgc
ggcctcaagaagaagatctctgacaaatgcaggaagaagaccgtatgcgcgaactgcaac
gcgtttaacggccccgtaaagaaatgtggcttgctgaagatcattcatgaaaagtataag
accacaaagaaagtcatcgatcccatggtgtcagatttcctccagtcatttgatgtggcc
attgaacacaacaaagaagtggagtcactactgaccagagcacaggaaaacctcaatcct
ctggtcgtgttgaatctcttccggaggattccaaacgaggatgttcctcttcttctgatg
aatccagaatccggaaaacccgctgacctcatcctgacacgcctgttagtgccgcccctc
tgcatccggccttccgtcgtcagcgacctcaaatcaggcaccaatgaagatgatcttacc
atgaagctaacggaaatcatcttcctcaacgacgtcatcaagaagcaccgcatgtcagga
gccaaaacccagatgatcatggaggactgggacttcctgcagctccagtgcgctctgtac
atcaacagcgagctgtcaggcatcccgctcaatatggcacccaagaaatggacccgcggc
tttgtgcaaagactcaagggaaaacaggggcggtttcgtggtaacctgtctggaaagaga
gtggatttctccggcagaacggtcatctctcccgacccaaacctgaggatcgatgaggtc
gctgtacctgtgcacgtcgccaaaatcctcacctacccagagaaggtaaataaagccaac
attgagctgatgaggaagctggtgcgtaacggtcctgatcttcacccaggagcaaacttc
attcaacagagacacatgcagatgaagaggttcttgaagtacggtaaccgagagaagatg
gctcaagagctgaagtacggtgacgtggttgagagacacatgattgatggtgacattgtg
ctgtttaaccggcagccgtctctgcacaaactcagtatcatggctcatattgcgcgtgtg
aaacctcatcggacgtttcgtttcaacgagtgtgtgtgcacgccgtacaacgctgatttt
gacggagacgagatgaaccttcacctgccgcagacggaagaagctaaagctgaagctctc
atcctcatggggacgaaggcaaatctggtcactcccagaaacggtgagccgctgatcgca
gccattcaggacttcctgacaggtgcctacctgctcacgctcaaagacactttcttcgac
cgaaccaaagcctgtcagatcgttgcctccatcctggtggggaaagatgagaaaatcaag
atctccctccctcatcctgctattctcaagccaatcaggctgtggacggggaagcagatc
tttagtctgatactcaagcccagtaaaagctgtccagtgaaggccaacctgcgcaccaaa
ggcaaacagtactgcggtaaaggggaggatctgtgttccaacgattcatttgtggtgatc
cagaacagtgagctgatgtgcggcagtatggataaaggaactctgggatccggatccaag
aacaacatcttctacatcctattgcgagactggggtcagcaggaggccgcggatgccatg
tcacgtctggcccgtctggctcccgtttacctctcaaatcgaggcttctctatcggtatc
ggagacgtgacgcccggacagggactcttgaaggccaaacaggaactactggacgatgga
tataagaaatgtgatgaatatatcgaagccctgaagacaggcagattacagcagcagccg
ggctgcaccgctgaggaaactctggaggcgttaatcctgaaggagctgtctgtcatcaga
gatcacgctggcagtgcatgtttgagagaactggacaaaagcaacagtccgttgatcatg
gctctgtgtggatccaaaggttcattcattaacatctcacagatgatcgcttgcgtcggg
cagcaggccatcagcggctctcgtgttcctgatggatttgagaaccgttcgctgcctcac
tttgaaaagcactccaaactccctgctgcgaagggctttgtggcagacagcttttattct
ggtctgacccccacggagttcttctttcacactatggccggtagagaaggtctggtcgac
accgccgtaaaaacagcagagacgggatacatgcagaggcgtctggtgaagtctctggag
gacttgtgctctcagtacgatctgacggtgcgcagctccaccggtgacatcatacagttc
atctacggcggagacggactcgatcccgcggccatggagggaaaagacgagccgctggag
ttcaaaagagtcctggacaacatcagagcggtgttcggctgcccaggtgagcctgcgctg
agcagaaacgagctggttttgaccactgactccatcatgaagagaaaagacttcctgtgc
tgtaaagacacatttctggaggcattgacagacactggcagtgagaagtacttacaggaa
atcagaaagttcataaaaacaatttcggagcgaatcaaaaagacacgtgacaagtacggc
atcaatgacaacggaacaacagagcctaaagttctgtaccagttggacaggatcactccg
acccagctggagaagtttctggaaacctgcagagacaaatatatgagggcacagatggag
ccgggatctgccgtcggagcgctgtgtgcccagagcatcggggagccgggcactcagatg
accctcaagacgtttcacttcgctggagtggcttccatgaacataactctgggagtcccg
agaatcaaagagatcatcaatgcatccaagaacatcagtacgcccatcataagtgccaac
ctggatacagatgatgatccagacttcgctcggctggtgaaagggcgcattgagaaaact
ctactgggagagatttctgagtacattgaggaggttttcctgcctgatgattgtttcatc
ctggtgaagctgtccctagagaggattcgtcttctgaggttggaggtgaacgctgagacc
gtacgatactccatctgcacgtcaaagctgcgggtgaagccgggtgatatcgcggttcac
ggagaggccgtggtctgtgtgtctccgagagaaaacagcaagagctccatgtactacgtc
ctgcagtcgctcaaacagctgcttcctaaggtggtggtccagggcatccctgaagtggcg
cgtgccgtcattcacattgatgagcagagcgggaaacagaagttcaaactgctggtggag
ggagacaatctcagggctgtcatggcaacacacggcgtcaacggcaacagaacaacatcc
aacaacacttacgaggtcgagaagacgttaggcatcgaagcagcgagatcgaccatcatt
aatgagatccagtacaccatggtaaaccacggtatgagcatcgaccgcaggcacgtcatg
ctgctggcggatctcatgtcctataagggtgagattctgggcattacccgcttcggtctg
gctaagatgaaggagagcgttctcatgctggcgtcctttgagaagacggcggaccatctg
tttgatgcagcgtactttgggcagaaagactcggtctgcggtgtgtccgagtgtattatt
atgggaatccccatgaatatcggcactggactctttaaacttttacacagcgccacaaag
gaccccaatcccccacgcagaccattgctctttgataatcctgatttccacatccctttg
gctccataa
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