Megalobrama amblycephala (Wuchang bream): 125255444
Help
Entry
125255444 CDS
T08212
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 5-like isoform X1
KO
K24850
interferon-induced protein with tetratricopeptide repeats 5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mamb03016
]
125255444
Transfer RNA biogenesis [BR:
mamb03016
]
Eukaryotic type
tRNA degradation factors
Other tRNA degradation factors
125255444
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_12
CFAP70_TPR_C
TPR_CcmH_CycH
TPR_11
TPR_16
TPR_17
TPR_10
RMD1-3
TPR_Psidin_N
TPR_Slam
CFAP70_mid_TPR
TPR_15
TPR_YpiA_C
TPR_20
HAT_Syf1_CNRKL1_N
ANAPC3
DUF7017
ZSWIM1-3_helical
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
125255444
NCBI-ProteinID:
XP_048026675
LinkDB
All DBs
Position
LG20:13651115..13657570
Genome browser
AA seq
484 aa
AA seq
DB search
MTSNMSTEPDRTLRTKLHQLECHFTWALLKDDIDLNDVINRLEEQIKEQILGKKEVLART
YSALAYIQFLLGFHEEAHNNLMISVELHIECHRDEFHKTLIVTYGNIAWLNYHMKNYTEC
EIYLKKLQKINETFSKEFSSVPEVLGEKGWTFLKFSRKYYDRAKECFRKALELEPDEGEW
NAGYAIALYRTEYETLESNSEDSPTIMQLRRAIDKNPDDDVLKVLLSLRLVVYKRYREAE
SLVEMALERSPDHPHVIRYIGKFFRNQGSVDRSITLLKRALEHSPNSSFIHHQLALCYKQ
KKIQIQQEQSHHSKGSRVQQIRDQCIYHLEKATSLMISFISAMSDLALMYGENHNMSRAE
ELFLVTFKTAEEKNDNLHVVNFYYAEFQLYCHKCEPLAIKHYTECLKMSPKSVEGKRSAK
SLRKIAEKRIRRNSQEGEAYGILGFLHKENGEKRQAIECYEKALSYEDNDEFLSNLSALR
LSLQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaacatgagtacggaacctgacagaactttgagaacaaaacttcaccagctg
gaatgccacttcacctgggctctattaaaagatgatatagatctaaatgatgttatcaac
aggctggaagaacagattaaagaacagattcttggaaagaaagaagtacttgcccgaact
tacagtgctttggcatatatccagttccttctggggtttcacgaggaggcacataacaac
ctcatgatatccgtggagctccacattgaatgccatagggatgaatttcataagactctt
attgtcacatatggaaacattgcctggttaaactatcacatgaaaaactacacagagtgt
gaaatttacctgaagaagctccagaagataaacgaaacattttcaaaagagttttcatct
gttccggaggtgcttggtgagaagggatggacttttcttaaattctcacgcaaatattac
gacagagccaaagaatgtttcaggaaggctttagaactggaaccagatgaaggtgaatgg
aacgctggttatgccattgctctgtatcgtactgaatacgagactttggagtccaattcg
gaggattcgcctacaatcatgcaactgagaagggccattgacaagaatccagatgatgat
gttctcaaggtcctcttaagtttgcgattggttgtttacaagaggtacagagaagctgaa
agcttggtagagatggctttagaaagatctccagatcacccacatgtcattcgatatatt
gggaaattcttcaggaatcaagggtctgtggacaggtcaatcactctgttgaagcgagct
cttgaacactcacccaattcaagtttcatacaccatcagttggctctctgctataagcag
aagaaaatccaaattcagcaagaacaaagtcaccattccaaggggtcaagagttcaacag
attcgtgatcagtgcatctaccatttagaaaaggctaccagcctgatgatctcctttatt
tctgcaatgagcgatctagcactgatgtacggagagaaccacaacatgtctcgggctgag
gagctgtttctggtcacattcaaaacagctgaagagaaaaatgacaatttgcatgtggtc
aatttttattacgctgaattccagctttactgccacaaatgtgagccgttagctatcaaa
cactacacagaatgtctgaagatgagcccgaaatcagtcgaagggaagagaagtgccaaa
agtttgaggaagatcgctgagaaacggattcggagaaactcgcaggaaggggaggcttat
gggatactagggttccttcataaggaaaatggagagaaacgtcaagccattgagtgttat
gagaaagctctgagttatgaagacaacgatgagttcctcagtaaccttagtgcactcagg
ctgtccttacagtaa
DBGET
integrated database retrieval system
