Megalobrama amblycephala (Wuchang bream): 125255558
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Entry
125255558 CDS
T08212
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125255558 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125255558 (smarcd2)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125255558 (smarcd2)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125255558 (smarcd2)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
125255558 (smarcd2)
PBAF complex
125255558 (smarcd2)
GBAF(ncBAF) complex
125255558 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
125255558
NCBI-ProteinID:
XP_048026824
LinkDB
All DBs
Position
LG20:complement(8051156..8066383)
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AA seq
504 aa
AA seq
DB search
MASRSGFPVNSSTPINPSMNPMNPGHSSALRMPAMPQNSPYRGMGSTPNQYHQRPSMPPS
RGMPMGGMGSMGSPLPGPSYSGGMAMRPGMPQAAMDPTRKRLLQQQQQQSGGLMGPRRGV
KRRKMADKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPITQKRKLR
IYISNTYTPGKPEGEEAEKVASWELRVEGKLLEDPGKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKNNKLQDCHEKEYINCNRYFRQIFGCPRMRFSDIPMKLASLLQHPDPI
VINHNISVDPNDQKKTACFDIDVEVDDPLKAQMTSFLSSTTNQQEIAALEMKIHETIESI
NQLKTQRDFMLSFSNNPQEFIQDWLKSQSRDLKLMTDTVGNPEEERRTEFYHSPWVTEAV
GRYIFTKVQQRRQELEQVLGIRLT
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcttctagatcgggtttccccgtcaactccagtaccccaataaaccccagcatgaac
cccatgaacccgggtcacagcagcgcactgagaatgccagcaatgccgcagaattcaccc
tacagagggatgggcagtactccgaaccagtatcaccaacgcccaagtatgccacccagc
cgaggaatgccaatggggggcatggggtctatgggttcccctctacctggtccgtcttat
agtggaggcatggccatgcgacccgggatgcctcaagctgcgatggaccccacccggaag
agactccttcagcagcaacagcagcagtccgggggtctaatgggcccgagaaggggggtg
aagaggcgtaagatggctgacaaagtgctcccacagaggatcagggatctggtcccagag
tctcaggcttacatggaccttctggcctttgagagaaagctggaccagaccattgctcgc
aaacgcatggagatacaggaggccatcaaaaagccgatcacgcaaaaacgcaaactgagg
atctacatttctaacacctatacacctggcaagccagagggagaggaggctgaaaaggtg
gcatcctgggaacttcgagtggaaggcaaactcctggaggaccctgggaaacagaaacga
aagttttcatccttctttaaaagcctggtcattgaattggacaaagaactttacggccca
gacaaccacttggtggagtggcacagaatgcccacaacccaggagacggatggatttcag
gtgaagagaccaggagatgtgaatgtgaaatgtactctccttctcatgctggaccaccag
cctccgcagtataagctggatccacgtctagctcgtctgttgggagtccacactcagacc
agagccagtatcatgcaggccctgtggctctacatcaaaaacaacaagctgcaagactgc
catgagaaagagtacattaattgcaaccgatacttcagacagatttttggctgccccagg
atgagattttcggatattcccatgaagctcgccagcctccttcagcaccccgaccccatc
gtcatcaatcataacatcagtgtggatcccaatgatcagaaaaagactgcgtgctttgat
atcgatgttgaggtggacgaccctctgaaggctcagatgaccagcttcctgtcatccaca
accaatcagcaggagattgctgccctggagatgaagatccatgagactattgaatccatc
aaccagttgaagacccagagagacttcatgctcagcttcagtaacaacccgcaggagttc
atccaggactggctcaagtctcagagccgagacctcaagttaatgacggacactgtggga
aatccagaggaggagaggagaactgagttttatcactcaccctgggtcacagaagctgtt
ggacgctatatatttacaaaggtccagcagaggagacaagaattggaacaggtactagga
atccgactcacttaa
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integrated database retrieval system
