Megalobrama amblycephala (Wuchang bream): 125255603
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Entry
125255603 CDS
T08212
Symbol
ercc4
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420
Nucleotide excision repair
mamb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
125255603 (ercc4)
03460 Fanconi anemia pathway
125255603 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mamb03032
]
125255603 (ercc4)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125255603 (ercc4)
DNA replication proteins [BR:
mamb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125255603 (ercc4)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125255603 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
AmiA-like
Motif
Other DBs
NCBI-GeneID:
125255603
NCBI-ProteinID:
XP_048026934
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All DBs
Position
LG20:12482814..12494793
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AA seq
895 aa
AA seq
DB search
MASALLEYETEMFLSVFSTDGLLITAEGLGMDRILLHFMRVYSRKGSLVLLLNTTTPEQE
YFTEQLRAEGVSHLPQTVTSDVQSSDRYNVYTKGGVLFVTSRILVVDFLTDRIPAHLITG
ILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATSFSSGFCKVERVMRNLFVKKL
FLWPRFQASVNTTLDKHKPDVVELHVSLTPAMRAIQSSILDIMNACLKELKRYNPTLEAE
DLSLENSLGTSFEKTIRHYLDPLWHQLGSRTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRTSQKSFGSNSGWLFLDSSTSMFINARSRVYRIQESKKKLKVGETDQKQSSLAPPKR
ELVLEKNPKWEALTEVLQEIEKENSSSECEPGRVLICASDDRTCAQLKEYIQKGAEHLLN
RLYSRTIGKEDPQPDLLKFDKGWPKKDSAKSKGKNGQPKRPKAKSKRPTKIERPSRDSQM
EGQEDGAEKDLIGNSEDEGGLAEEVEEEEEEEEILLDLSSDDYYGILKEPLTVIHPLKGC
SDPYSLTRVLHEVDPMFVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYGGSTEEQRYL
TVLSKEKQAFEHLIREKASMVVPEEREGREDTNLDLVRSQEPASATTNTRKAGGREEVKE
PHRIIVDMREFRSELPSLLHQRGLDIEPVTLEVGDYILTSEICVERKSVSDLIGSLQSGR
LYTQCLSMSRFYRRPVLLIEFDPAKPFSLVARSDFRQEISASDVTSKLTLLTLHFPRLRL
LWCPSPYVTAELFQELKNGRPEPDAAAAQAVTAESETVTESADLYNPGPYDFLLRMPGVS
VKNFKSLIKHASCLADLITFSQERLSEILGSSSNARQLYEFLHNSMNVVPVQKNK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgcgctgctggagtatgagacggagatgtttctgagtgtgttcagcacagat
ggactgctgatcacagctgaggggctcgggatggaccgcattctcttacacttcatgagg
gtgtattcaaggaagggcagtctggtgctcttattaaacacaaccactcctgaacaggag
tattttacagagcagctccgtgctgaaggggtgagccatcttccccagactgtgaccagt
gatgtgcagagctctgacagatataatgtatacactaaaggaggagttctctttgtgacc
agccgcatcttagttgtggacttccttacggacagaattcctgctcacctcataacagga
atcttggtgtatcgtgcccataagatcattgagtcttgtcaggaggctttcattctaaga
ctttataggcagaaaaacaagactgggttcatcaaggcctttacggacaaggccacatcc
ttctcttctggcttctgtaaagtcgaacgtgtcatgagaaacctgtttgtgaagaagctt
tttctttggccaagattccaagcatcagtaaacacaacactggacaaacacaagccggat
gtggtggagctgcatgtgtctttgactccagcgatgagagccattcagagctctattttg
gacattatgaatgcctgcttgaaagagctgaagcgctacaatcccactctggaagcagaa
gacctctctctggagaacagcctgggcacttcctttgagaaaacaattcgtcattacctt
gacccactgtggcatcagctggggtccaggaccaagtctctcgttcaggacctgaagatt
ttaagaactcttcttctctacctcactcagtatgactgtgtcaccttcctcaatctgctg
gagtctttgagaaccagccagaaaagctttggtagtaattcaggttggttattcctggac
tcaagcacatcaatgtttataaatgctcgcagccgtgtgtatcgcattcaggagtcaaag
aagaaactgaaagttggagagactgaccagaaacagagttctctagcccctccaaaaaga
gagcttgtgcttgagaaaaatccaaagtgggaagcactaacagaggtgctacaggagatt
gagaaagaaaacagcagctctgaatgtgaaccaggccgtgtgttgatatgtgccagtgat
gacagaacatgtgctcagctgaaggaatatatccaaaaaggagcagaacacctactgaat
cgcctttattcacgcaccattgggaaagaagatcctcagcctgatctactgaagtttgac
aaaggctggcccaagaaggacagcgctaagagcaaagggaagaatgggcagccgaaaaga
cccaaagctaaatcaaagagaccaacaaagatcgagagaccgtcgagagactctcagatg
gaggggcaggaagatggagctgaaaaagacctgattgggaacagtgaagatgaaggagga
ctggctgaagaggtggaggaggaagaggaagaagaagagatacttttagatctctcttcg
gatgactactatggaattcttaaagagccactgactgtcattcacccactgaagggttgc
agcgacccctacagtttgacacgggtgttgcatgaggttgaccccatgtttgttgttttg
tatgatgctgaactcagttttgtgcggcaactggagatttataaagctagcaggccagga
aaacctctccgtgtgtattttcttatatatggaggttcaacagaagaacaaaggtatctt
acagttttgagcaaagagaaacaagcatttgagcacctcataagggaaaaagccagtatg
gttgtgccagaagagagagaaggtagagaggacaccaatctagatcttgtccgcagtcag
gaacccgccagtgccaccaccaacacccgcaaagcaggaggtcgtgaagaagttaaagag
cctcatcgaatcatagttgacatgagagagttccgcagtgagctcccttcccttctgcat
caacgtggtctcgacattgaaccggtcaccttagaggttggcgactacatattgacttct
gagatctgcgtagagcgcaaaagtgtcagtgacctcattggttccctgcagagtgggcgt
ctctacactcaatgcctctctatgagtcgattctatcgtcgccctgtgctgcttatcgag
tttgaccccgcgaagcctttctcccttgtggcccgcagtgactttcgtcaggagatctct
gccagcgacgtcacctccaaactgaccctcctcaccctccatttccctcgcttgaggctg
ctctggtgcccgtctccctatgtgacagcagagctgtttcaggagctcaaaaacggccgc
ccagagcctgacgccgccgcagctcaggccgttacggcggaatcagagaccgtgacagag
tcagcagacctgtacaatcccggaccttacgacttcttgcttcgtatgcctggagtcagt
gtaaaaaatttcaagagccttataaagcacgcttcctgtctggctgatcttataacattt
agccaggaaaggctcagtgagatattgggtagtagcagcaatgccagacagctttatgaa
tttctgcacaattccatgaatgtggtgcctgttcagaagaacaagtag
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