Megalobrama amblycephala (Wuchang bream): 125255933
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Entry
125255933 CDS
T08212
Symbol
zeb1b
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125255933 (zeb1b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
125255933 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
DUF6801
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
125255933
NCBI-ProteinID:
XP_048027488
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All DBs
Position
LG20:complement(18857039..18928556)
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AA seq
1097 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGTADPDGRWDDVKEECMSDEDERSRDALVEEMLQQGDTAVIFPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPSLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGIFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLESTQAKGLQAGTGIIGAGGVGIAQA
PQQVIQAISLPILDQDGSAKIIINYSLDPSQAQAVLQSPKKETLGLNTEVCKAQKLPEDL
TVKTNRDKTTITVDEKSMLHNDTTLKHCGKDGHRVNGKNLDGKLDLEEGLCPGKPPLKNL
LSLLKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISIDPSSPLAEDEQTT
PGDLDGTRDGSPRTEPDDQINSEEQGERECCSPEEGVAAGVNGIESVPTSPSPLNLSADG
PVPARTLEEGEGPLDLSLPKSAATAAVASGHVNTVYSAQEEPLNLTCTKKELLSNASTNA
AIYASQPSANPINIVTTQLPTLVAITDQGQAQCLRALTTTKQTILIPQLTYSYTTTSSSP
AGADTPQKNVIHVNGIKEEKQEMGSEVNSTLEEQTDSDSGPTRKKMKRTESGLFACDLCD
KIFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFS
HSGSYSQHMNHRYSYCKKEAQGQGLGQGVEEEDNHGEEQPRTGSAAASPPSQLDSDERGS
STREDESEEEDEIGSGSLVDEDEIQVVKIGEEGDEDDQGADEEQEGEGDRMEGAEREDGD
EEGESEENDGQTLKVVVMQDECEEEENGEDERTEEEAMDTGALEHMKDTTEGDEERENNK
KNSENEENTAAMNGGVK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactacagtcatgtgctggagggccagtcggactcggatgatgaagataagcttcac
attgtggaggaggaagggagtctcctggacggggctgactgtgatagcgtggcccctgat
gatgaccctaacgggaccgccgacccggacggcagatgggatgatgtgaaagaggaatgc
atgtcagacgaggatgagaggagcagagatgctttggttgaggagatgctccagcaagga
gacacggccgtcatcttccccgaggctccagacgacgaaccgcgtcagggcacaccagaa
accagtggacatgatgaaaatggcacgccagactcattttctcagcttctcacctgtccg
tattgctctcgtggctacaagcgttacacctcactgaaggagcacattaaatacagacac
gagaagagcgaggacaacttcagctgctctctctgcagctacacctttgcctaccgaaca
cagctggacagacacatgaccgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaagaagcgtttctctcattctggctcctacagttcccacatcagcagtaagaag
tgcattggcctcatctcagtaaacgggcggccacgaccttctcccgccactggggctgcc
aagaccccgcagtgctcttccccatccctgccaacctcttcccctacagcacgtgtccaa
gtcagagacaaactggacaacagcaaaccccttcaggagcagcttcccttgacgcagatc
aagtccgagccgctggactatgagtacaagcccgtggtggtggccccatctgctagaggc
gtaaatggcatcttccagggtggggcagcagcccctctccagggtgccgtacaggctgtt
gtgctcccaacagtgggtctggtatccccaatcagcatcaacctgggggacttacagaat
atgctgaaggtggcagtggatggcaatgtcatcaggcaagtgctggaaagcacgcaagct
aaggggctgcaagcagggacgggaatcattggagcaggaggggtgggaattgctcaagca
ccccagcaagtcatccaggccattagtcttcccatcttggatcaggatggcagtgctaag
atcatcatcaactacagtctagacccgtcacaggcccaagcggtccttcaaagtccgaag
aaggaaactttggggttgaacacggaggtctgcaaggctcagaagctaccagaggacctt
actgtcaagacaaatagggacaaaaccaccatcactgtggatgaaaagagtatgttacac
aatgacacaacacttaagcactgtggtaaagatggacatagggtaaacgggaaaaatctt
gacgggaagttggacttggaggaaggactgtgtcctggtaagcctcctctgaagaacctt
ctctccttacttaaggcttactttgctttaaacaatgagcccaccaaggaggagctggca
aagatatcagagtctgtcagtcttccagctgaggtggtaaagaagtggtttgagaagatg
cagctgggacagatctccatagacccctcctcacctctggctgaagatgagcagacaacc
cctggggatttggatggtactagagatggatcacccagaacagagccggatgatcaaata
aactcagaggagcaaggggagagggaatgctgtagcccagaagagggcgtagcagctggg
gtgaatgggatcgagagtgtccctacatccccttcaccactaaacctatcggccgatggt
cctgtcccagccaggactcttgaggaaggcgaaggacctctcgatctgtcgctaccaaaa
tccgctgctacagctgctgtggctagcggtcacgttaacactgtttactcggctcaagag
gagccgctgaatttgacttgcacaaagaaggaactgctcagcaatgcaagcaccaatgct
gccatatatgccagccaaccaagtgccaatcccataaacattgtgaccactcaactgccc
accctagtggctatcactgaccagggacaagcacaatgtctacgtgcacttaccaccact
aaacaaaccatcctgatcccgcagctgacgtacagttacaccactacatcctccagccca
gcaggggccgacacaccacagaagaacgttatacacgtcaatggcattaaggaggagaaa
caggagatgggttcagaggtcaactcaacattggaagaacagacagactcagactcaggg
ccgacgaggaagaagatgaaaaggacagagagtgggctgttcgcctgtgacctgtgtgac
aaaatcttccagaagagcagctcactgctccgccataaatacgaacacacaggaaagagg
cctcatgaatgcgggatctgcagcaaggccttcaaacacaaacaccacctaatagagcac
ctgcgcctgcactccggagaaaagccgtaccagtgcgacaagtgcggcaaacgcttctct
cactccggctcctactcgcaacacatgaaccaccgatactcgtactgtaagaaagaggct
caaggtcaagggctaggccaaggagtcgaggaagaggacaaccacggcgaggagcagcct
cggacgggaagcgcggcggcctcgcccccctcccaactggactcagacgaacgggggagt
agtaccagagaggatgagagtgaggaggaggatgagataggctctgggagcttagtggat
gaggatgagattcaggtggtcaagattggagaggagggagatgaagacgaccagggagca
gatgaagaacaggaaggggaaggagacaggatggagggagcggaacgagaagatggcgac
gaggaaggtgagagcgaggaaaatgacggacagacgctgaaagttgtagtgatgcaggat
gaatgtgaggaggaagaaaatggggaagatgagcgaacggaggaggaagccatggacaca
ggggcccttgaacacatgaaggacacaacagaaggagacgaggaaagagagaacaataaa
aaaaacagtgaaaatgaagaaaacacagccgctatgaatggaggtgtgaaatga
DBGET
integrated database retrieval system
