Megalobrama amblycephala (Wuchang bream): 125255949
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Entry
125255949 CDS
T08212
Symbol
nrxn1a
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 1a
KO
K07377
neurexin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125255949 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125255949 (nrxn1a)
Membrane trafficking [BR:
mamb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
125255949 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
DUF6929
Motif
Other DBs
NCBI-GeneID:
125255949
NCBI-ProteinID:
XP_048027511
LinkDB
All DBs
Position
LG20:16624823..16832538
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AA seq
1496 aa
AA seq
DB search
MSFSMRNGAHLIWMGLLVCCLVDMGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHAVTLRRNFK
NTTLVVDEEIKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSSAIKDQVPYKGWIT
NLRVNGSEPPLIGSEGINSDICEADHVCLNGGVCSIVNDEPICDCSETGFQGKDCSEEEA
YVGGLAHLMMGDQGKRKEREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDPVTFETPESFITLDKWTAKK
AGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLYLLLDMGS
GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIRTPYNAPGESEILDLDDILYLGGL
PEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPSCSKEPPK
QCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIQLPVVMHTE
AEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI
FAGQNLNDNEWHTVRVVRRGKSLKLTVDDLQPSEGQITGDHTQLEFHNVETGIVTEKRYM
PAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADPVTFKSRSSYVTL
PTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGN
SNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLDLKGDLYVGGVAKEMYKD
LPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEGEENGPSTTCQEDSCSN
QGVCLQQWEGFSCDCSMTSFGGPLCNDHESLTSLEQREAGTTYIFGRDGGLIVYTWPPND
RPSTRADRLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIEKGNIRVVFNVGTDDINIEET
SKFVNDGKYHIVRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVD
EWLLDKGRQLTIFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPNVRVEG
SARLVGDMPSSSITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDLLVASA
ECPSDDEDIDPCDPSSAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILILLYA
MYKYRNRDEGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDKEYYV
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcgatgcggaacggcgcacatctaatctggatgggcttactggtttgttgc
cttgtcgacatgggggccagcatggagttcaccggcgcagaaggccagtgggccaggttt
cctatgtggaacgcctgctgcgagagcgaaatgagtttcaacatgaagaccaaaagcgct
catggacttttagtgtactttgacgacgagggattctgtgacttcttggaactgctcatc
cacaacggtagactcagtttgcggttctccatcttctgcgccgagccggcgacggtgctc
tccgacactgccgtcaacgacagccgctggcacgccgtgaccttgcgcaggaatttcaaa
aacactacattagttgtggacgaagagatcaagtgggtggaggttaagtcgaaaaggagg
gacatgacggtcttcagccatttattcttaggaggaatacctcctgaactgcgatctgta
gcattacgcctcacctcttcagccatcaaagatcaggttccctacaaaggatggataacc
aatctgagggtgaacggttcagagccgccgcttatcggtagcgagggaatcaacagcgac
atttgcgaagccgaccacgtttgcctgaacggaggagtctgcagcatcgtcaacgacgag
ccgatttgcgactgctccgaaacgggattccagggaaaagactgcagtgaagaagaggcc
tatgtaggaggtcttgcgcacctgatgatgggcgaccaagggaaaagaaaagagagagaa
gagtatgtggccaccttcaagggttcagagtatttctgttacgacctgtccccgaacccc
atccagagcagtagcgatgaaattacgctctccttcaagaccctgcagcgcaacggactg
atgctccacaccggaaagtcggcagactacgtcaacctggcgctgaagaacggtgccgtc
tcgctggtcatcaacctgggctctggggccttcgaggccctggtggagcccgtcaatggg
aaatttaatgacaatgcctggcatgatgtgaaggttaccaggaaccttcgtcagcactca
ggcattggacacgctatggttacaatatccgtggatggaattctgaccaccactggatat
acacaagaggactacaccatgctaggctcggacgactttttctatgtggggggtagtccc
agcactgcggatctgcccggatcccctgttagcaacaactttatgggctgcctgaaagag
gttgtgtacaagaacaacgatgtaaggctcgagctatctcgactggccaagctaggcgac
cccaaaatgaaggtgagcggtgtggtggccttcaaatgtgaaaacgtagctaccctagat
cctgtcacctttgagacaccagagtcattcattacccttgacaagtggactgccaaaaaa
gccggttccatctccttcgacttccgcaccactgagcccaacggcctgctcctcttcagc
cacggaaaacccaaaccgcagcagcagaaagaccccaagagtcccaaaaccttgaaggtg
gatttcttcgccatagagatgctggacggccacctataccttctactggacatgggctcg
ggcaccaccaaaacccgtgccgtcaacaaaaaagtcaacgacggagaatggtaccacgtg
gacttccagagagacggaagatcaggcaccatttccgtcaactcgatccgtactccctac
aacgctcccggtgagagtgagatcctggacttggacgacatactctacctgggcggcctg
ccagaggatcgcgctggtctgatcttccccacggaggtgtggaccgctctccttaactac
ggctatgtgggctgtgtgcgagatctgttcatggacggccagagcaaggacatccggcgg
atagcggaggcccagagggcggttggggtaaagccatcctgctctaaggaacctcctaaa
cagtgtctaagcaacccctgccttaacagtggcacctgcagagagggctggaaccgatat
gtgtgcgactgctcagggacgggctatctaggtcgctcctgtgagagagatgccaccatc
ctcagttatgatggcagtaagttcatgaagatccagttgccagtagtgatgcacacagag
gcagaagacgtgtcgctgcgcttccgttcccagcgtgcctatggtgttctcatggcaacc
acctcccggaactcagctgacactctgaggctggagctggacggaggacgtgtccgactc
actgtcaatctagactgtatcaggataaactgtactaccagtaaaggtccagagaccata
tttgcgggccagaacttgaatgacaacgaatggcacacagttcgtgttgtcagaagaggc
aaaagtctgaagctaacggtggatgacctccagccatctgaaggtcaaatcacgggggac
cacacgcagctggagttccacaatgtggaaacaggcatcgttacagagaagcggtacatg
cccgccgtgccctccaacttcattggacacctgcagggtctgtccttcaatggcatgtcc
tacattgacctgtgcaagaacggcgacattgactactgtgaactgaatgccatgatcggc
tacagaagcatcgttgcagatccggtgaccttcaagtctcgctctagctatgtgaccttg
cccaccctgcaggcctattactccatgcacttgttcttccagtttaagaccacttcacca
gatgggctcatcctgtacaaccgaggagatggcaatgactttatagtagtagagctggta
aaaggatatctccattatgtgtcagatcttggaaatggagctcatctcatcaaaggaaat
tccaacacacctctgaatgacaatcactggcacaatgtgatgatctcaagagatacaaac
aaccttcacactgtcaaaatagacaccaaaatcaccacacagactaccatgggagccaag
aacctggatctgaaaggtgatttgtatgtgggaggtgtggccaaagagatgtataaggac
ttgccaaagctggtgcattctaaagagggcttccagggctgcttggcatctgtagacctg
aacggccgtttgccagacctgctgtcagacgcactgtccaacgccggccaggtggagaga
ggatgcgaaggtgaggaaaacggccccagcactacctgtcaagaggattcttgctccaat
cagggcgtgtgtctgcagcagtgggaggggttcagttgcgactgcagcatgacatcattt
ggagggccgctctgcaatgaccatgaaagtcttacaagtttggaacagcgtgaggcggga
accacatacatattcggacgtgacggagggctcattgtgtacacatggccgcccaacgac
agaccgagcacacgagctgaccgactggctgtcggctttagcacccagcagaaggatgca
gtgctggttagggtggacagctcttccggcctgggagactacctgcagcttcagattgaa
aaaggcaatatcagagtggtgttcaatgtgggcactgatgacataaacattgaagaaacc
tcaaagtttgtaaatgatggaaagtaccacatagttcgctttacgagaagtggtggtaac
gccaccttgcaggtggatgatctgccagtcattgagcgctacccaacaggcaacattgat
aacgaacgcctggcgattgctagacagcgaatcccatatcggcttggtcgagtagttgac
gaatggctactcgacaaaggtcggcagctcaccatcttcaacagtcagaccaccataaag
attggaggctgggagaagggcagtcggcccttccagggccagctctcagggctttactac
aatggcctaaaagtgctcaacatggccgccgagggcgaccccaacgtgcgtgtggagggt
agtgcccggctggtgggagatatgccctcctcttctataacgccccagtccagcgcatcc
gcaacgggcaaccgctcagaaacgtcgccctccatcaccgacattaccactacaactgca
tccaatcgccagggcaagcagacaacaactccacaggatgatcttctggtagcatcggca
gaatgtcccagtgacgatgaggacatcgacccttgcgacccaagttcagctcaccctcca
ctgcctgaggcaaagggttaccccagcccagaggtgattcgggagtccagcagcaccaca
ggcatggtcgtaggcattgttgcggccgccgccctctgcatcctaatcctgctctatgcc
atgtacaaataccgaaaccgcgacgagggctcataccacgtggacgagagccgtaactat
attagtaattctgccacgcagcccaacggagccgctgtcaaagaaaagcccattggcgtg
cccaaaaataaaaaagataaaaagaacaaggacaaggagtactacgtctga
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