Megalobrama amblycephala (Wuchang bream): 125255990
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Entry
125255990 CDS
T08212
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125255990 (rnf40)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125255990 (rnf40)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
125255990 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
zf-C3HC4
CC_Bre1
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
125255990
NCBI-ProteinID:
XP_048027563
LinkDB
All DBs
Position
LG20:20376744..20391196
Genome browser
AA seq
1015 aa
AA seq
DB search
MSKKGSMSGTGGGKRPSGGDSPPGAPEKKLKKEEKTTTTLIEPIRIGGVSSTEEMDMKVI
QFKNKKLCERLEQRQALEDELREKIEKLEKRQATDDTTLLIVNRCWTQLEENIHELLQHV
EPKDAPAPVQTPVTPPVPADVPVPAAAPTPAPEPSAPLPAPMEGEDGLPQPPPSAEGVEE
EPQQPVQEKEQTQEQEQQQQLPDSVEKPTDKPVEDGIPAPPPPPPLSESAKAFLATLDNS
SEEELTLQLQDRMQFSKGAVACMVCIFDRLHSSIDELCTRVESAVCEDDSQREIIATNRT
LLEENNRLQDLASSLQGKHHKMSLEYNELVDKVTSSETKVSEMETAVEDLQWDIEKLRKR
EQKLNKHLAEALEQLNSGYHATGSSGGLPGGQITLSIQKFESLNAELEQNQELANSRMAE
LEKLQQELQEAVRESEKLKMDLRNIPEEVLKETPEYKCLQSQFSLLYNESLSVKTQLDEA
RALLLTAKNAHLRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAA
NEQAGPINREMRHLISSLQNHNHQLKGDVQRYKRKLRETQMEINKLKCQSGDTGALMLEE
SVGDGGLEVKKEEDDDQEEEEERRRELERQRAREREREAERERERERERERQRSDELKRK
DSDALKMLRGELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEKKSKAEVEELRQRV
RELEERERKESKKLADEDALRKIRVAEETIEHLQKKLAATKQVEEEALLSEMDVTGQAFE
DMQEQNSRLMQQLREKDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLL
VVQKLEEKEGVLQSTLAALEKELALRTQALELNKRKAVEAAQLAEDLKVQLEHTQTKLRE
IQASVLDNRTARERESANLKKAQEDLSRLRRKLEKQKKVEVYTDADEILQEEINQYKAKL
RCPCCNTRDKETVLTKCFHVFCYECLKTRYDTRQRKCPKCNAAFGANDFHRIYIT
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaagggaagcatgtctggcactgggggcgggaagcgcccctcaggaggggat
agtccccctggcgctcctgaaaaaaagctgaagaaagaggagaagactaccaccactctc
attgagcccatacgtattggaggagtttcttctacggaggagatggacatgaaggtcatt
caattcaagaacaagaagctctgcgaacgccttgagcagaggcaggctttggaggatgag
ttgagagagaagattgagaagctggagaagaggcaggccactgatgacaccacgctgctt
atcgtcaaccgctgttggactcagctcgaggaaaatatccatgaattgctgcagcatgtg
gagcccaaggatgctccagcacctgtccagacccctgtcacccctcctgttccggcagac
gtccctgttcccgctgcagctccaacacctgctcctgaaccttctgctcctttgccggct
ccaatggaaggggaggatggcctcccccagcctccaccttcagctgagggggtggaagaa
gaaccacaacaaccagtgcaagaaaaggaacagacacaagagcaagagcagcaacagcag
ctacctgactccgtggagaagccgactgataaaccagtggaggatggcattcccgcccct
ccgcctccaccacctctcagtgagagcgcaaaggctttcctggccactctggataacagc
agtgaggaggagctcacgctgcagctacaggacaggatgcagttcagcaagggtgctgtg
gcctgcatggtctgcatctttgaccgcctgcatagcagcattgacgagctgtgtactaga
gtggagtcagctgtgtgtgaagatgacagtcagcgagagataattgccacaaaccgcaca
cttctagaggaaaataatcgactgcaagaccttgcttcctcccttcaagggaaacaccac
aaaatgtcattagagtataatgaactggttgacaaagttacgagttctgagacaaaagtg
tctgaaatggaaactgctgtggaggatctgcagtgggacatcgaaaaactccgtaagaga
gagcagaagctgaataaacacctagcagaagctctggagcagcttaattccggttaccat
gccactggcagttctggtgggttaccaggtggtcaaatcactctcagtatacaaaagttt
gaatctctgaatgccgaattagagcagaaccaggaacttgctaatagccgcatggcagag
cttgagaaactgcagcaagagttacaggaagctgttcgggagagcgagaaactaaagatg
gatctgaggaatataccagaggaagtgttgaaggagaccccagagtacaagtgcctccaa
tcacagttctctctgctgtacaatgagtctctgagtgtgaaaacccagctggatgaagcc
agagctcttctgcttacagccaaaaacgctcatctgcggcagatagagcacatggagagt
gatgagttgtctcttcagaagaagttacgcactgaggtcatccagctagaggacactctg
gcccaggtgcgcaaggagtatgaaatgctacggatagagttcgaacagaatcttgcagcc
aatgagcaagcaggcccaataaaccgagaaatgagacatttaatcagcagtctgcagaac
cataatcatcagttgaaaggggatgtgcagagatataagaggaaactgcgtgagacacag
atggaaataaacaagttgaagtgccagagtggagatacaggtgcgctgatgttggaagaa
agcgtgggtgatggaggacttgaggttaagaaagaagaagatgatgaccaggaggaggag
gaagagaggaggagagagctggaaaggcaacgggcacgggagagagagagggaggcggag
agagagagggagcgagaaagagagcgggagagacagcgcagtgacgagctgaagaggaag
gactctgatgcgctgaagatgctgagaggagagctcaaaaaagctcaggagtctcagaag
gaaatgaaactactgctagacatgtacaaatcagccccaaaggagcagcgagataaagtg
caacttatggccgcagaaaagaagtccaaagcagaggtggaagagttgaggcagcgggta
cgggaattggaggagagggaaagaaaagaaagcaaaaagctggcagatgaagatgccctc
cgcaagatccgcgtggccgaggagaccatcgaacacttgcagaaaaaactggctgctact
aaacaggtggaggaagaggctctgctgagcgagatggatgtgacgggacaggcgtttgaa
gacatgcaggagcagaacagcaggctcatgcagcagctccgagagaaagacgatgccaac
ttcaaactaatgagtgagagaatcaaatccaaccagatttacaagcttctacgggaggaa
aaagaggagctggcagaccaagtgctcacattcaaaacccaggtggacgctcagctcctg
gtagtgcagaaactagaagagaaggagggtgtcctgcagagcacactggctgctctggag
aaagagctggcactgcgcactcaagcactggagctcaacaagcgcaaggcggtggaggcg
gcccagttggccgaggaccttaaagtgcagctggagcacactcagaccaagttgagggaa
atccaagcctcagtactagacaaccgcactgcccgtgaaagggagagcgccaacctcaag
aaagcacaggaggacttgtccaggctgcgacgtaagctggagaaacagaagaaagttgag
gtgtacacagatgctgatgagattctgcaagaagaaattaatcagtataaggctaaattg
cgatgtccctgttgtaatacgcgagataaggagactgtcctcaccaagtgtttccacgtc
ttctgctatgaatgcttgaagactcgctatgacactcgccagaggaagtgccccaaatgc
aatgctgcattcggagcaaatgacttccaccgcatctacatcacctaa
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