Megalobrama amblycephala (Wuchang bream): 125256193
Help
Entry
125256193 CDS
T08212
Symbol
pbrm1
Name
(RefSeq) LOW QUALITY PROTEIN: protein polybromo-1
KO
K11757
protein polybromo-1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125256193 (pbrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125256193 (pbrm1)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256193 (pbrm1)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
125256193 (pbrm1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
125256193 (pbrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
125256193
NCBI-ProteinID:
XP_048027910
LinkDB
All DBs
Position
LG21:4814608..4849071
Genome browser
AA seq
1645 aa
AA seq
DB search
MHLITAFAMGSKRRRATSPSSSVSGGDFEDSQTISIPSTSRKRRRTTNIPTVDPIAVCHE
LYNTIRDYKDDQGRMLCELFIRAPKRRNQPDYYDVVSQPIDMMKIQQKLKMEEYDDVEQL
TADFQLLFNNAKTYYKPETPEFRAACKLWDLYIRTKNEFVQRGDYDEDDDDDDTQENPGG
VTEEESVSSLKEVLGQLLDAVLTYTEHGRLISELFQRLPSKVQYPDYYAIIKEPIDLKTI
AHRIQMCYYKSVNHMAKDIDLLVKNAKTYNEPGSQVFKDANTIKKVFAQRKLELEHAEPV
KSSIRIRNRRFAQVDRLSSITTALQYGSESEEDAILTGSVHYDEGESEAESIHSSMDMCN
PIFQMYEAVRGGRNNQGQLLAEPFFQLPSRKDYPDYFQQISHPISLQQIRSKMKNNEYES
VEQIDTDLNLMFENAKRYNAPSSQIYKRVLKLQHILQMKRKELMRRDDEDGDSMLSSTLS
DGGSIKRKSHKKNTKKNRLKALYAAVAEAREMTGRRLCDLFMVKPSKKDYPDYYKIILEP
MDLRTIDHNIRSDRYPSEDSMMEDMKLMFRNARHFNEEGSQVYNDANILEKILREKRREL
GPPPDDEDIVSPKLKIRKSGISPKKSKYLTPLQQKLNELYEAVKNYTDKRGRRLSTIFLR
LPSRAELPDYYVAIKKPIDMEKVKSHMLANKYQDVDALVEDLVLMFNNACTYNEPESLIY
KDALVLHKVLLETRRDLEGGDDAHVPDVARLIQELIRNLFVSVLGHQDDEGRCYSDSLAE
IPAVDPNNSDKTPLNFEIIRANVDKGRYRRLDVFQDHMFEVLEKARHLHRTDSEIFEDSV
ELQQFFIRIRDELCKNGEILLTPALSYTTKHLHSDVEKEKKEKLPKEYEEDKLKREEEKK
EAEKSEDTAGGGWQGVLQRNYSQDCSFKDNMYHVGDYVYVEPTEPNLQPHIVCIERLWQD
DAGENWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKIPVSKIMGKCVVMFVKEYFKL
QPDSFRPEDVFVCESRYSAKTKSFKKIKMWTMPLSSVKFVIREVPLPVVRVASMFAPKQD
SEKPPEVAEDNKAVPSIIDKEREDVTMEISNGEPGCQYYEQLCYNDMWLKVGDCVYIRSH
GLVRNRVGRIEKMWVRDGAAYFFGPIFIHPEETEHEPTKMFYKKEVFLSNLEESCPMTCI
GGKCTVSSFKDFLSCRPTEMPEEDVLLCESRYIESEKQMKKFKGLKRFSLSAKVVEDEIY
YFRKLIVPQKEPSPLLDKKIEELEAKFADMTDEELEDLGDDDGDGSDAHCMPQLQTQLTS
DMDMLHYAPPQSAPKSIKGLSKKEGAKRKINMSGYILFSSEMRAVIKAQHPDFSFGELSR
LVGTEWRNLEATKKAEYEERAAKVAEQQERERATQNSPRAGTPVGALMGVVPAPTPMGML
SHSMTPMAGKGMLGSYGPTMLPFHGPVDGMINVARMPPHPMGVPALPLHFPWGMPGMPYL
GMNGMAPGSTGSTYGTQMGVMNSGQQAPPPYPGQGQVGQPSLQQPSTPIFVAPPPKPQRL
LHSEAYLRYIEGLSAESTTVSKWDQTLSARRKDVRLTKEQESRLPSHWLKSKGAHKTMAD
ALWRLRDLMLRDTLNIQQTYNIQNI
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttatcacagcatttgcaatgggctcaaagcgacggagagccacgtctccatcc
agcagtgtgagcggaggagattttgaggacagccagaccatatccataccttcaaccagt
cggaagaggagaagaaccacaaacatccccactgttgaccctattgctgtgtgtcatgag
ttgtacaacactatcagagactataaggatgatcagggcaggatgctgtgtgaactcttc
atcagagcaccaaagagaagaaaccagccagattactatgatgtggtgtcccagcccatt
gacatgatgaagattcagcagaagctgaagatggaggagtatgatgatgttgagcagctc
acagcagactttcagctcttattcaacaatgccaagacatactacaaaccagaaactccg
gagttcagagcggcttgtaaactgtgggatctgtatattcgcaccaaaaatgagtttgtg
cagcgaggggactatgatgaagatgatgatgatgacgacacacaggaaaaccctggaggg
gtcacagaggaggagtccgtctcaagccttaaggaagttcttgggcagcttctggatgct
gtgctgacttacacagaacacgggcgtctcattagtgaacttttccagagacttccctct
aaagtgcaatatccagattattatgctattattaaagaaccaatagatctgaagaccatt
gcacaccgaatacagatgtgctactataaaagtgtaaaccatatggctaaagacattgac
ttgttagtcaaaaatgccaaaacctacaatgaacctggatcacaagtgtttaaagatgca
aacaccatcaaaaaggtatttgcacagagaaaactggagcttgaacatgctgaacctgtt
aaaagtagcatcaggatcaggaacagaaggtttgcacaagtagacagactctcctccatc
actactgctctacagtacggctcagagagtgaagaggatgccatactaactggctctgtt
cattacgacgaaggcgagtcagaggccgagagcatccactccagcatggacatgtgcaac
cccatcttccagatgtacgaggcagtgcggggtggcagaaacaaccagggacagctccta
gcagagcccttctttcagctcccctccaggaaagactaccctgactacttccagcaaatc
agccatccaatctccctccagcagataaggagtaaaatgaagaacaatgagtatgaaagt
gtggaacagatagatacagacctcaacctgatgtttgagaacgcaaagcgctacaacgct
cccagctctcaaatctacaagcgtgtgctaaagttgcagcatatactgcagatgaagagg
aaggaactgatgaggagagatgatgaagatggtgacagtatgctctcatccactctttct
gatggtggcagcatcaagcgcaaaagccataagaagaacacaaagaaaaaccgcttgaag
gctctgtacgctgctgtggcagaggctcgggagatgacaggccggaggctctgcgacctc
ttcatggtcaagccctcaaagaaagactacccagactactacaagattatactggaacca
atggacctgaggaccatagaccacaacatccgctccgacagataccccagtgaggactcc
atgatggaggacatgaagctgatgttccgcaatgcacgtcacttcaatgaagaaggctca
caagtttacaacgacgccaacattctggagaagatattaagagaaaaacgaagggaactc
ggacctccgccagatgacgaagatatcgtttcacccaagctgaaaattaggaagagtggc
atctctcctaaaaagtccaagtacctgacccctctgcagcagaaactcaatgagctctat
gaagccgtgaagaactacaccgacaagcgcgggcggcgcctcagcacaatcttcctccgt
cttccatcccgagctgagcttccagactactatgttgccatcaagaaacccatagacatg
gagaaggtcaagagccacatgctggccaacaagtaccaggatgttgatgctctggtggaa
gacttagtcttgatgttcaacaacgcttgcacctacaacgaacctgaatcgctgatctac
aaagatgcactggtgcttcacaaagtgcttttggagactaggagagacttggagggaggc
gacgacgcacatgtcccagatgttgcacggctcatccaggagctcattcgcaatcttttc
gtctcagtgcttggccaccaggacgacgagggccgttgctatagtgactcactggcggag
attccagctgttgatcctaacaattccgataagactccactgaactttgagatcatcaga
gctaacgtggataagggccgttataggagactagatgtgttccaggaccatatgtttgaa
gttttggagaaagccagacatctgcacaggacggactctgagatctttgaggactctgtg
gagctccagcagttcttcatccggatcagagatgagctgtgcaagaatggagagattttg
ttgacgcccgccctcagttacaccactaaacacctgcacagcgacgtggagaaagagaag
aaagagaagctgcctaaagaatatgaagaggataaactcaagagagaggaagagaaaaaa
gaggctgagaagagcgaggacacggcaggtggtggatggcagggagtcctgcaacgcaac
tacagccaggactgcagcttcaaggacaacatgtaccatgtgggagactatgtttatgtg
gagcccacagaaccaaacctgcagccgcacatcgtctgcatagagcgcctctggcaggat
gatgcaggagagaactggctttatggctgctggttctacagacccaacgaaacatttcat
cttgctacacgcaaatttcttgagaaagaagttttcaaaagcgactattacaacaaaatt
cctgtcagtaaaataatgggcaaatgtgtcgtcatgtttgtgaaggagtatttcaaactt
cagcctgacagcttccgacctgaagacgtttttgtctgcgagtctcggtattctgctaaa
accaagtccttcaaaaagatcaagatgtggacgatgcccctgagctcagtgaagttcgtc
attcgtgaagtgccgttgcctgtggttcgtgtggcctccatgtttgcacccaaacaggac
agtgaaaagcctcctgaggtggcagaggataacaaagctgtaccatctattattgataag
gagagggaggatgttaccatggagatcagtaatggcgagccaggctgccagtactatgag
cagctctgctacaatgacatgtggctgaaagtgggagactgcgtctacatccgctctcat
gggctcgtacgcaaccgtgtgggcaggatagaaaagatgtgggtgcgagatggagctgcc
tattttttcgggcccattttcatccatcccgaggagaccgagcatgagcctaccaagatg
ttctacaagaaggaagtgttcctcagtaacctggaagaatcctgccctatgacctgtatt
ggagggaagtgtacagtgtcttctttcaaagatttcctgtcatgccggccaactgaaatg
ccggaggaggatgtgttgctgtgtgagagccgctacattgagagtgagaagcaaatgaag
aagtttaagggactgaagcgtttctctttgtctgccaaagtagtcgaggatgagatctat
tactttcgaaagctcatagtgcctcagaaggagccgtctccactgctggataagaagatc
gaggagttggaggccaagtttgcggacatgacggatgaagagctggaggatttgggagat
gatgatggagacggttctgatgctcactgcatgccgcagcttcagactcagctgaccagc
gacatggacatgctgcattatgcacccccgcagtccgcaccaaagtcgataaagggtctg
tcgaagaaggagggagcaaagaggaagatcaacatgagtgggtacattctcttcagcagt
gaaatgagagctgtcatcaaggcccagcaccctgacttctcctttggagaactcagtcga
ctggtgggcacagagtggaggaaccttgaggccactaagaaagctgagtatgaagagcgg
gcagctaaggtagcagagcagcaggagcgagaaagagcaacgcagaactccccaagagca
ggtaccccagtaggggcgctcatgggggtagtacctgccccgacccccatggggatgctt
agccacagcatgacgcctatggcaggaaaaggcatgttgggtagttatgggccaaccatg
ctacccttccatgggcctgtcgatggcatgattaacgtggcccgcatgcctccacatccc
atgggggtgcctgccttacccctccacttcccgtggggtatgcctggcatgccgtatctg
ggtatgaatggaatggccccaggttcaacaggaagcacttatgggactcagatgggtgtg
atgaactcaggccaacaggccccgccaccctacccggggcaggggcaggttgggcagccc
tctctacagcagccctccacccccatatttgtggctcctccacccaaaccccagcgactg
ctacattcagaggcctacctgcggtatatagaaggactcagtgctgagtccactactgtc
agcaaatgggaccaaacactctcggctcgcaggaaagatgtgcggctcacaaaagagcag
gagagccgtctgccctctcattggctgaagagcaagggagctcacaagaccatggctgac
gctctgtggcgactacgggacctgatgctgcgagacacactaaacattcaacagacgtat
aacatccaaaacatctga
DBGET
integrated database retrieval system
