Megalobrama amblycephala (Wuchang bream): 125256260
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Entry
125256260 CDS
T08212
Symbol
prdm2b
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb00310
Lysine degradation
mamb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125256260 (prdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125256260 (prdm2b)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256260 (prdm2b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
125256260 (prdm2b)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125256260 (prdm2b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125256260 (prdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HC_2
zf-C2HE
Zap1_zf1
zf-C2H2_jaz
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
125256260
NCBI-ProteinID:
XP_048028051
LinkDB
All DBs
Position
LG21:complement(21904355..21925275)
Genome browser
AA seq
1761 aa
AA seq
DB search
MALPQGAYETLDDIPAHVWKGLPNSMKLGPSAVNPNRIGVWASRLIPKGKRFGPFVGERK
KRSQVTSNVYMWEVYFPAWGWMCVDATDPMKGNWLRYVNWARSSQEQNLFPLEINRAIYY
KVLRPIGPDEELLVWYNGEDNPEIAAALEEERTSNLSKKSSPRAKRDLFLPKARRKLSEK
ARQADLGGFCEPKKSSAAEPLFTEMRDSEEGLNGEERPSSPPELQQENTVSQLSSTESEN
PVQSRTTEMNQREELDEQHANVDGQLPQLNQSPQHPSEAESVDGNEKSLLQLHSGSPAEE
SSESPLCDTECISSLANPELEAEGDFEDDPQGGTYPCQHCERHFSTKQGLERHTHIHTTS
NIQTHTFKCRYCAKPFGSQVGRRRHERRHENGSKTLNRPGSLSGTAFLHSPTMPNDSATS
GSVSTPSHTVVMNTQNSPPQQTSDSLKKEPGVESDRPFILDENGESKELHPCKYCNKAFG
THTNMRRHQRRIHERHLIPKGVRRKGILLQDGSSQHQQHEQGQPILLQEESPSASPPPIY
VPSVETEDEGEREECMVDISNNISENLSHYIDGKIPSTSTVSNCEVIEVDSSTAALFGLD
ALILSPKQISHALKVETRTCPVKEVSCVAQTASKRRTATPPLLPAVKVEAETISSSSSLS
SPSSQSSLLVGNIFSQSTETLAFQKEKTVYLSPKLKQLLQAPDGQKPSISLITDNRLTTP
LSVTSLPAVQGRFKRRTASPPTTSQSSPPQRNENISSATGVSCTLKVPKIESHCMTRSWS
LSSSDHGDTESLTGKDWSPSRSGGNSCNQQPLDLSNSFSKRDNSVSRGSGEAVLDLSMNR
KSPVDHEVKTCSATLPPHVKRKKPNTSILEKVLMNEYAGLNSPGEEGSNTLGSPDALSSS
ESATCVAPSSPGSETERLPCESTSPPSLTPMTINPSSPSSSSIASTTPPPPVLPTIPSPP
PLSSQHFQVSDSLSPSPFPVLSPKMSPKAVDSLEEVSDSSALTESCHDALNSIVNESDQT
AEQLDPAISPLPQDAKRHCTADSSSKSETLLEGSTHDSKPQFLRNADQAGSSHLEWDITT
SETSQSLSCEGILPQDLNIKTEGCHKSKSSLSPVQSNPKESSPTFLSEFHSPQKRSEVDN
NLVVEDSGKKEESVDITTNGADVSPGTPVKNCDEVETPERETFVKSFVCNVCKEPFRSIK
DLSGHIIQHASEWPFKCEFCVQLFGNGTALLEHRSSLHGVGRIYVCSICSKEFAFLCNLQ
QHQSDLHPSQSCTHTAVENGKLRPQNYTDPAYANVEKDAVVDSIEDSSEECKSDTNKVEE
EENGHEDPTEELYTTIKIMASEAGKPKGPDVRLGINQHYPSFKPPPFPYHNRTPDGSVSS
ATNFTTHNIPQTFSTAIRCTKCGNSFDNMPELHKHILVCANASDKKRYTPKKNPIPLKQV
VKQSPNGLLSTTGASTGQNAFRRMGQPKRLNFNQDTTSKAKLSALNKKKNQLVQKAISQK
NKSAASAKKPITRVKEEETHDIHACPYCSREFTYPASLAKHIACSCPQRPVAKKLKKGAL
MPQDKNRSLRSRATESEVKQEAGSGSSSKPLGKTRARSSEPIENEAPPAIKGKEPQVRTK
RPALNMDNTAPQTKKGKKSNEPLTSITPAVTDDSSSRPPPKMQRGSKEVVVKKEAVDKKE
AVLKKEVVVKKEVVDKKEVVVKTHQSKKEERFSARTRERKGGPVTRSVQMASASAPLEVK
TEDLSNHEPGQSEESLLKLAR
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggctttgcctcaaggagcatatgaaaccttggatgacatcccagcccatgtgtggaag
gggctgccaaacagcatgaagctgggaccgtcagctgtcaacccaaatcgcattggtgta
tgggcatctagattaatacctaaaggcaaaaggtttgggccatttgtaggagaacgaaag
aaaagatctcaagtgacaagcaatgtttacatgtgggaggtatattttccagcctggggt
tggatgtgtgtagatgccacagatccaatgaaagggaactggttgcggtatgtgaactgg
gcacgctcttctcaagagcaaaacctctttccactggaaatcaaccgagccatttactac
aaagtgttaaggccaatcggacccgacgaagaacttctcgtgtggtacaatggggaagac
aatcctgagatagcagctgcattagaggaagaaaggactagcaacctgagcaagaagagt
tcacctagagcaaagcgagatttgtttctccctaaagcaaggaggaagctgtcggaaaaa
gccagacaggctgatttgggtggattctgtgaaccgaagaaatcgagtgctgctgaaccc
ttattcacagagatgcgggactcagaggaagggcttaatggtgaggaaagaccatcttca
cctccagagttgcaacaggagaatacagtttcccagttatcttctacagaaagtgaaaac
cctgtccagtctcgtacaacagagatgaatcagagggaagaattggatgagcaacatgca
aacgttgatggacaactgccacagttaaatcagagcccacagcacccctctgaggcagaa
tcagttgatgggaatgaaaaatctctcctgcaattacattcaggcagccctgcagaagaa
agctctgagagtccactgtgtgatacagagtgtatatcttctttagcgaatcctgagttg
gaggcagagggggattttgaggatgacccccagggaggaacgtatccctgtcagcactgc
gagcgtcatttctccaccaaacagggcctggagcgccacactcacattcacactacttca
aacattcaaactcatacgtttaagtgccggtactgtgccaagccctttggctctcaggta
ggcaggcgcagacatgaacgtagacatgagaatgggagtaaaactttaaataggcccggg
tcactcagtggaacagcgttcctccacagtcctacaatgcccaatgattctgcaacctct
ggcagtgtctccactccaagccatacagtcgttatgaacacacagaacagtcctcctcag
caaacctctgacagtttgaaaaaggagcctggtgttgaatctgaccgaccttttatatta
gatgagaatggggagtcaaaggagcttcatccttgcaagtactgtaacaaggctttcggc
acacacaccaacatgcgcaggcaccagcgcagaatccatgagcggcatctaataccgaaa
ggtgttcgccggaaaggtatactcctgcaggatggctcctcccaacaccagcagcatgaa
caagggcagcccattttgctccaggaagagtcaccaagtgccagtcccccacctatttat
gtgcccagtgtggagaccgaggatgagggagagagggaggagtgcatggttgatatctct
aacaatatttctgaaaatctcagccattacatcgatggaaagatcccatctacaagcaca
gtaagcaactgtgaggtcatcgaggttgattcaagcactgcagcgttgtttggccttgat
gctctcattttgagtcccaaacaaattagtcatgctcttaaagttgaaacacggacttgt
ccagtgaaggaagtttcatgcgtggctcagacagcttctaaaaggcgaactgctacacca
ccgctactgcctgctgtgaaagtggaggcagaaacgatatcctcctcttcctcattgtcc
tccccttcctctcagtcctctttgttggtaggaaacattttctcccagtcaactgaaaca
ttagcttttcaaaaagagaaaacagtttatctttctccgaaactcaaacaattactacag
gctccagacggtcagaaaccatccataagtctaattacagataacagattgaccacccca
ctttctgtaacttcactgcctgctgtccaaggtaggtttaaaagaagaactgcctcccct
cccacaacttcacagagtagcccaccacaaagaaatgagaacataagctctgcaactggg
gtttcatgtactctgaaggtgccaaagattgagagccactgcatgacacgttcttggagt
ttgtccagcagtgatcatggggacactgaaagcctgacaggaaaagactggtctccttca
agaagcggcgggaattcttgcaatcagcagccgcttgacctttcaaattccttcagtaaa
agagacaatagtgtaagcagaggatctggagaggctgtgcttgacttaagtatgaaccgt
aaaagtcctgttgaccatgaagtaaagacatgctcagccacactaccgccacatgtgaag
aggaagaaacctaatactagcattttagaaaaagtgttaatgaatgagtatgctggccta
aactcacccggagaagaaggatccaacactcttggaagccctgatgccctttcatcttct
gagagtgccacatgtgtagccccttctagtcctggatcagaaacggagcgccttccttgt
gaatcaacctctcctccctccttgacccctatgactattaatccatcctctccatcttcc
tctagtatagcttcaactactccccctcctccagtcttgcccactatcccatctcctcca
cctttatcatcgcagcattttcaagtgtcagactccttatcaccttcccctttccctgtc
ttgtcccctaaaatgtctcccaaagcagtcgatagtttagaggaagtgtccgattcatct
gcattaacagaatcatgccatgatgcattaaattccattgttaatgaatcagaccaaact
gctgagcagttagaccctgcgatttctccactgcctcaggatgcaaaaagacattgtaca
gcagattcatcttcaaagtcagaaacactactagagggctcaacccatgattctaagcct
cagtttttaagaaatgcagaccaagcaggttcttctcacctagagtgggatattactact
tctgaaaccagccaaagcctttcctgtgaaggaattctccctcaagacctcaatattaaa
acagaaggctgccacaaatcaaagtcttctctttctccagtacaatcaaatcctaaggaa
tcttcaccgaccttcctcagcgaatttcattctccacagaagagatccgaggtcgataac
aacttggttgtagaggattcagggaaaaaagaggagtcggtggatataaccacaaatgga
gctgacgtttcacctgggactccagtcaaaaattgtgatgaggttgaaacaccagagaga
gagacttttgtcaagagttttgtgtgtaacgtctgcaaagagccatttcgctcaatcaaa
gaccttagtggccatataatacagcatgcgtcagagtggccttttaagtgtgagttttgc
gtgcagttatttggcaacggcacagcgcttctcgagcaccgctcctctctccacggggtg
ggaagaatttatgtttgctccatttgctcaaaggagtttgccttcctctgcaatctccag
caacatcaaagtgacctacatccaagtcagagttgcactcacactgccgttgaaaatggg
aagctcagacctcagaactacacggatcctgcttacgcaaatgtggagaaagatgctgtt
gttgactcaattgaggattcttctgaggagtgtaaaagtgacactaataaggtggaagaa
gaggaaaatggccatgaggaccctacagaagaactatacactacaataaagattatggca
tctgaggctggtaaaccgaaaggtccagatgtacgacttggcattaatcaacactacccc
agctttaagcctccacctttcccataccacaaccgaacacctgatggctcggtttcctct
gccactaattttaccacacacaacatcccccaaacatttagcactgccatccggtgtacc
aaatgcggaaacagctttgacaacatgcctgagctacacaaacacatattggtttgtgct
aatgctagtgataagaaacgctacacccctaagaagaatcccattcctctcaaacaagtt
gtgaaacagtctccaaatggtcttctttccaccacaggagcttctactgggcagaatgcc
ttccgcagaatgggccaaccaaaaaggctcaactttaaccaagatacaacctctaaagca
aagttatcagctctgaataagaagaaaaaccagcttgtccagaaagccatatctcagaag
aacaagtctgctgcctctgcaaagaaaccgataacccgggtaaaggaagaggagactcac
gatatccatgcatgcccatactgtagtcgagagttcacatacccagccagcctcgctaaa
cacatcgcttgtagctgcccacaaagacctgttgccaagaagttgaaaaaaggtgcactg
atgcctcaagataaaaacaggagtctccgaagtcgagccactgagtctgaagtcaaacaa
gaggcaggttctggatcaagttcaaagcccttggggaaaaccagagcccggagctctgag
ccaattgagaatgaagctccaccagcaattaaaggaaaagaacctcaggtacgtacaaag
aggccagccttgaacatggacaacacggccccacaaactaagaaaggcaaaaagagcaat
gagccactgacttctataactcctgcagttactgatgactcttcatcacgaccaccacct
aaaatgcaacgtggatctaaagaggttgttgtaaagaaggaggctgttgacaagaaggag
gctgttctcaagaaggaggttgttgttaagaaggaggttgttgacaagaaggaggttgtt
gtgaaaacgcaccagtctaaaaaggaggagcgtttttcggcaaggacacgggagagaaaa
ggtgggccggtgacacgcagtgtgcagatggctagtgcttcagctcctttggaagtgaag
actgaagacctctcaaaccatgaaccagggcaatctgaggagtctctattgaagttagcc
aggtag
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integrated database retrieval system
