Megalobrama amblycephala (Wuchang bream): 125256472
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Entry
125256472 CDS
T08212
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor isoform X1
KO
K20286
TATA element modulatory factor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125256472 (tmf1)
Membrane trafficking [BR:
mamb04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
125256472 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
125256472
NCBI-ProteinID:
XP_048028466
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All DBs
Position
LG21:complement(12814291..12827692)
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AA seq
1136 aa
AA seq
DB search
MSWFNASQLSSFAKQALTTAQKSIDRVLDIKEEEQWGDTTEPTFTDPPGKLVSTGWAMNQ
WNSPSEEHIKTLPPSSEAITKPVTRTVVDESEDFFSAFLPHGDVQTVSNTKVVSVPPAKS
NRRLREKADKEKELEVGDSQGQTDLSKCGSQETIEIKPTETELLEQNSSSADEQLQPELV
VPASIVALEEAAEQETSEDRTESDGLVITSDVTLTNVPLSSSEAESAGVFEPALTIETKN
PVKTSPVPSKEILLESKDAKSEDRQSNTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSA
SSRQETAEAKAGLHLMQGSFQLLSASTCSDFPRLDEYPKLTESCGSSSDAFERIDSFSVQ
SLDSRSVSEVNSDDEIPGNRTLASITAGPLPAPAQSAPETKQDEEEGITESMNDQSLDDN
EMEESGRSATPVNCEQTDELQEGEQEAEFDLRLTNQKTYVNEMAVSQSTKEKLGDSPCQI
FELQKIIEELSSRLEKRESQLLVVSKDKARLEEECDNLKDEMISLKEESSAVQSLKDEFT
QRIAEAERKAQLACKERDIAKKEIKGLREELASRLNSSETLELIKEKEEQIRELLEEGEK
LSKQQLQHSNIIKKLRVKEKESDAQITKQTKKLKELEEELKHLQQVLDGKEEVEKQHREN
IKKLNAVVERQEKELSKLQTSDEELQEKNRSLQAALDSSYKELAELHKANATKDSEAQEL
ALSREVQAKEELSLALEKVQEESRLQQEALANQVADLRLALQRAEQQQAKKEDYLREEIS
ELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQATLGAQTASWEKLEKNISDRLADAQ
AQLAVSIEKERSATEELLAIRAQIASLESQASLLRQEKGRLQGQLDAERMRREKLEDDFS
RERVELENLKGEHVRVSEEAKKEKLLLTNQLEMEKMKVEQEKKKCYLAQEALKEKERKSL
SLSVTDAPASSTPSLSRSSSVSGAEHAGLPSSIFSQQEDSLDHSFSTMTMSISGTNLYEA
ARLGGGSSIIESLQSQLKLREGEIAQLQMEIASLERSRTVMAEELVRLTNQNDEMEDKVK
EIPRLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtcacagctgtctagttttgccaaacaagctctgacaactgct
cagaaatccatcgacagagttctggacattaaagaagaggagcagtggggtgacacgacc
gaaccgacctttactgatccaccaggcaagctggtatcaacaggatgggctatgaaccag
tggaactcgccctctgaggaacatatcaagactctccctccatcatctgaggccattact
aagcctgtcacaaggactgtggttgatgaatcggaggacttcttcagtgcctttctgcct
catggggatgtgcaaactgtaagcaacactaaagtggtgtctgtgccacctgccaagtcg
aaccgcaggctacgggaaaaagcagacaaggagaaggagctggaagtcggtgattcacaa
ggtcagacagacctcagtaaatgcggcagccaggaaactattgagataaagccgactgag
acagagcttttggagcaaaattcatcctcggctgatgagcagttacaaccagaactggtt
gttcctgcttcaatcgttgcactggaagaagctgccgaacaggaaaccagcgaggacagg
acagagtcagatggcttggttataacttcagatgtcacactcacaaatgtacctttatcc
tcctcagaggccgaatctgctggtgtgtttgaaccagctttgaccatcgagaccaaaaat
ccagtaaaaacctcgcctgttccttctaaagaaatccttttagaatccaaagacgctaaa
tcagaggacagacaaagcaacaccccgtctccccctgttagtgccttctcttctggtact
tccactaccagcgacatagaggttttggaccacgagagtgtgctaagcgagagctcggcc
agctccagacaggagaccgcagaggctaaagctggtctgcacctaatgcaaggctctttc
caactgctctctgcctcaacgtgcagcgacttccctcgtttggatgaatacccaaaactc
acggaaagctgcggctcctcttctgacgcctttgagcgtattgactcgtttagcgtgcag
tcgctggacagccgcagtgtcagcgaagtgaattctgatgacgagatcccaggcaaccgc
acattagcctctatcacggccggacctttgcctgctcctgctcagtcagcgccagagact
aaacaggatgaagaggagggtataacagagtcaatgaatgaccaatcactggatgataat
gagatggaggagagcggccgcagtgcaacgccagtgaactgtgagcagacggatgagctg
caggaaggcgaacaggaagctgaatttgacctcaggctgaccaaccaaaaaacttatgtg
aacgaaatggcagtatcgcagagtactaaagagaaactgggagattcaccctgtcagatt
tttgagctccagaagattattgaggagctttctagccgactagagaagagagaatcacag
ttgcttgtggtcagtaaagacaaagccagacttgaagaggagtgtgacaatctcaaagat
gagatgatcagcttaaaggaagaaagctctgctgttcagtctttaaaagacgagttcact
cagcgcatagctgaagctgagaggaaagctcaactcgcctgcaaggagagagacatcgcc
aaaaaggaaatcaagggcctcagagaagaactggcaagcaggttaaactcaagtgagact
ttggaactgataaaagagaaagaggaacagatccgagagcttctagaagaaggtgagaaa
ctgtccaagcagcagttgcagcactccaacatcataaagaaactgcgtgtgaaagagaaa
gagagtgatgcacagatcaccaaacagaccaaaaaactgaaggaactggaagaagaacta
aaacacttgcagcaggttttggacggtaaggaggaagtagaaaagcagcacagagagaac
attaagaagctgaatgctgtggtggagcggcaggagaaggaattgagtaaactgcagacc
agcgacgaggagcttcaggaaaagaaccgcagtttacaagcagcccttgacagctcctac
aaagagttggcagagttacacaaggccaatgccaccaaggatagtgaggcccaggaactg
gcgctgagcagagaggtgcaggcgaaagaagagctgagtctggctttggagaaagtccaa
gaagaatcgcgcctacaacaagaggcactggccaatcaggtggcggatttgaggctggct
ctacagagggctgaacagcagcaggccaagaaggaagattacctgagagaggagatcagt
gagttacagcagaggttgcaagaagcagagactagaaaccaggaacttagccaaagtgtt
acatcagcaacacggcccctcctgcggcagatagagaacctccaggccacacttggtgcc
cagacagcatcatgggaaaaactagagaagaacatctctgaccgcttagctgatgcccaa
gcccagcttgccgtttctatagagaaagagcgttcggctacagaggagctactagccatc
cgagcacagatagcatctttagaatcccaggcttccttgttgaggcaggagaagggacgt
ctgcaggggcagctggatgcagagaggatgcggcgggaaaaactggaggatgactttagc
agggagcgtgtagagctggagaatcttaaaggggaacatgtacgagtctcagaagaggca
aaaaaggagaagttgcttctcaccaaccaactggaaatggagaaaatgaaggtggaacag
gagaagaagaaatgctaccttgcgcaagaggccctcaaagaaaaggagaggaagtcttta
agtctgtctgtgactgatgctccagcgtcctccactccctcactgtcccgctccagttct
gttagtggggctgagcatgctggcttaccgtcctccattttctcacagcaggaggattct
ctggaccattctttcagcactatgaccatgtccatcagtgggactaacctatacgaggcg
gctcgactgggtggtggatccagcatcattgagagcctgcaatctcagctcaaactcaga
gagggcgagatagctcagctgcagatggagattgctagtctagagagaagtcgcactgtg
atggcggaagagcttgtgcgactgaccaatcagaatgatgagatggaggataaagtgaag
gaaatccctagactgaaagtgcaactgaaggatcttgaacaaaggcacaacacaatcctg
cagatgtatggagagaaggcagaggaggcggaagagctgcgtctggacctggaggatgtg
aagaacatgtacaaaacgcaaatagatgaactgttaaaaaatcaaaaataa
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