Megalobrama amblycephala (Wuchang bream): 125256475
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Entry
125256475 CDS
T08212
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04517
IgSF CAM signaling
mamb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125256475 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125256475 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125256475 (sptbn1)
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125256475 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
125256475 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
PMC2NT
SOS1_NGEF_PH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
125256475
NCBI-ProteinID:
XP_048028472
LinkDB
All DBs
Position
LG21:32404915..32520245
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEFDHMDIQQTYQDSVNNRWEDEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIETE
KMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAIETDIAAYEERVLAV
VAVAKELEAENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMNLGLQRVFQEMLYIM
DWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNANAQKFAVDEEGY
KPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSDDCGKDLTGAVRLLSQHRALEDEMTGRAGHLQHTVREGQAMADAGHFGEAKIRERIAD
VQAQWAALEQLAAVRKTRLEEACSLHQFQADADDVDAWTLDALRIVSTADVGHDEFSTQA
LVRKHKDASSEVASYRPVIDALHEQAQSLPPELAQTANVNERLAGIEERYKEVSELTRLR
KQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRVAVVNQIARQLIHSGHPSEKDIKAQQDKLNTRWSQFRDLVDQKKESLNSALGVQNYH
LDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEAKLGDLRGEADR
LAGEHPDQAKAITGRLAEITAVWEEMKETLRNREASLGEASKLQQFLRELDDFQSWLSRT
QTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEDKINSVVEAGRRLASDGNINADRIQERATSIDDRHKKNR
EAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELQSNKEWLDKIEKEGKQLVSEKPETEAVVKEKLAALQKMWTELETTTQTKAQCLFDANK
AELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLENQVEVRQREVEELQS
QAHVLRQEGKDTDEVDGRRVEVEQKFQELLEPLLKRKNFLMASREIHQFNRDVEDEILWV
EERMPLATSTDHGNNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFERSQSILKADSPNVES
IRARLTDLQQLWSLIIQETEKRHTRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESERIGMRQSQVDKLYAG
LKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLLDTGDKFRFFSMVRD
LMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKH
YASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSS
REMGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERKRKPPT
PEPVQAQDAETQQREGEQIAQNGLPSDQDSPRDGVDGEMNGVAERSSKEPSPIPSPTADR
RGKGSQSATLPAKGQETPSAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNHEMGFYK
DNKSAAQGIPYHNEIPISLKDAVCEVAVDYKKKKHVFKLRVTDGNEYLFQAKDDEEMNTW
IQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFSKKKQ
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcagaattcgaccacatggacatccagcagacataccaggacagt
gtcaacaaccgctgggaggacgaatgggacaatgagaacagctcggcgcgattattcgag
cgctctcgcatcaaggctctggctgatgagcgagaggccgtgcagaagaagaccttcacc
aaatgggtgaactcacacctggcgcgcgtgtcgtgtcggatcacggatctgtacatggac
ctgcgagacggacggatgctcatcaagctgctggaggtgttgtccggagagagactgccc
aagccaacgaagggccgcatgcgtatccactgcctggagaacgtggacaaagccctgcag
ttcctcaaggagcagcgggtgcacctggagaacatggggtcacatgacatcgtcgacggc
aaccaccgactcacgctcggactcatttggaccatcatcctccgcttccagatccaagac
atcagcgtggagacagaagacaataaagagaagcgctcagccaaggacgccctgctgctg
tggtgccagatgaagaccgcaggctatccgaacgtcaacatccacaacttcaccaccagc
tggcgtgatggaatggcgttcaatgccctcattcacaaacacaggccagacctgattgat
ttcgacaaactgaagaagtccaacgctcactacaacctgcagaacgccttcaacctggcc
gagcagcacctgggtctcaccaaacttctggacccagaagatatcagcgtagaccatccc
gatgagaagtccgtcatcacttacgtcgtcacgtactaccattatttctccaagatgaag
gccttgaaggtggagggcaaacgtatcggaaaggtgcttgacaacgccatcgagactgag
aagatgatcgagaaatatgaatctctggcgtccgatctgctggagtggattgaacaaacc
atcatcatcctcaacaaccgcaagtttgcaaactcactagttggagtccagcagcagctt
caggccttcaacacctaccggacagtggagaaaccgcccaaattcactgagaagggcaac
ctggaggtgcttctgtttactatccagagcaagatgagggccaataaccagaaggtgtac
atgccccgagagggcaaactcatctcagacatcaacaaggcgtgggagcgtctggagaag
gctgagcacgagcgcgagctggcgttgaggaccgagctgatccgacaggagaaactggag
cagctcgccagacgcttcgaccgcaaggctgccatgagggagacctggctgagcgagaac
cagcgcctcgtttcccaggacaatttcggattcgacctccaggcggttgaggcagctacc
aaaaaacacgaagccatcgagacggatatcgcggcgtacgaggagcgcgtgctggcggtg
gtcgccgtggccaaagaactggaggccgagaactaccacgacatcaagcgaatcgcggct
cgtaaagacaacgtgctgcggctgtgggagtatctgctggagctgctcaaagctcgccgg
cagcggctggagatgaacctcggcctgcagcgcgtcttccaggagatgctctacatcatg
gactggatggatgaaatgaagatgctgctgctgtctcaggattatgggaagcacttgctt
ggggtggaagatctgcttcagaaacacgctctggtggaggccgacatcggcatacaggcc
gaccgcgtcaaagccgtcaacgccaacgcacagaagtttgccgtggatgaggagggctac
aaaccttgtgaccctcaggtcatccgtgaccgcgtggcccacatggagttctgctaccag
gaactgacccagctcgcagccgagcgccgcgcccgcctcgaagagtcccgtcgcctttgg
aagttcttctgggagatggccgaggaagagggctggattcgcgagaaagagcagatcctg
tcctcggacgactgcggtaaggatctgacgggcgccgtccgcctgttgagtcaacatcgc
gccctcgaagacgaaatgaccggccgcgccggtcacctccagcacacggtgcgcgaaggt
caagcgatggccgacgccgggcatttcggcgaagccaagatccgtgagcgtattgcagac
gtccaagcgcagtgggctgctctggaacagctggcagcggtgaggaaaacccgcttggaa
gaagcctgcagccttcaccagttccaggccgacgctgacgatgttgacgcctggactttg
gacgcactccgaatcgtctccaccgctgacgttggccatgatgaattttccactcaagct
ttggtcaggaaacacaaagacgcgtcgtccgaggttgctagttatcggccagtgatcgac
gcccttcacgagcaggcgcaatcccttcctcccgaactggcgcagactgcgaatgtcaac
gagcggctggcgggcatcgaggagcgctataaggaggtttcagagttgaccaggctgagg
aaacaggctctgcaggacgccctggcgctctataagatgtttagcgaggcagatgcatgt
gaactgtggatcgatgagaaagagcagtggctcaacagcatggagatcccagagaaactg
gaggaccttgaggtcattcagcacaggtttgagagtctggagcctgaaatgaataaccag
gcctcacgtgtggccgtcgtcaatcagatcgccaggcagctgatacacagcggacacccg
agcgagaaagacatcaaagctcaacaagacaaactcaacaccaggtggagtcagttccgc
gacctggtggaccagaagaaagagtccctgaactccgccttgggcgtgcagaactaccac
cttgactgtaatgagacaaaatcctggatccgtgagaagacaaaagtcatcgagtccacc
caggagctgggcaacgacctcacgggcgtaatggcccttcagcgcaaactcaccggcatg
gaacgcgatctggctgccatcgaagccaaactgggcgacctccgcggtgaggcggatcgc
ttggccggcgaacatcccgaccaggccaaagccatcacgggacggctggcggaaatcacc
gccgtttgggaggagatgaaagaaacactacgaaaccgcgaagcgtctcttggcgaagcc
agcaagctgcagcagttcctccgcgagctggatgatttccagtcctggctttcccgtacg
cagacggccattgcgtccgaggacatgcccaacacgctagccgaggcggagaagcttcta
gcccaacacgaaggcatcaagaacgagattaacaactacgaagaggactaccagaagatg
agagacatgggtgagatggtgacacagggacagacggatgctcagtacatgttcctgaga
caaaggctccaggctttggatactggatggaacgagcttcacaagatgtgggagaaccgg
cagaaccttctgtcacagtctcacgcctatcagatcttcctcagagacaccaaacaagct
gaggccttccttaacaaccaggagtatgttctggcccataccgagatgcccaccaccctg
gaaggggcggaagctgccattaagaaacaggaggacttcatgaccaccatggacgccaat
gaagacaagatcaacagtgtggtggaggccggtaggagacttgccagcgatggaaacatc
aacgccgaccgcatccaggagagagcaacctccatcgatgaccggcacaagaagaaccgt
gaggccgctgtggagctgctcatgaggttgaaggacaacagagacctgcagaagttcttg
caggactgccaggagctgtccctgtggatcaatgagaagatgttgacagcacaggacatg
tcctacgatgaagctcgaaacctgcacagcaaatggctcaaacatcaagccttcatggcc
gaactgcagtccaacaaagagtggctggacaaaatcgagaaggaagggaagcagctggtc
tcggagaagccggagacagaagctgtagtgaaggagaagttggcggcgctgcagaagatg
tggaccgaactggaaaccacaactcagactaaagcccagtgtctgtttgatgccaacaag
gccgaactcttcacacagagctgcgccgacctggacaaatggctggtgggcctggagggt
cagatccaatcagacgactatggcaaagacctgaccagcgtcaacatcctgctcaagaaa
caacagatgttggagaaccaggtggaggttcgtcagagggaggtggaggagcttcagtct
caagctcatgtgctgcgtcaggaaggaaaggacacggacgaggtcgatggacgtcgggtc
gaggtggagcagaagttccaggagctgctggagccgctgttgaagaggaaaaacttcctc
atggcctctcgtgagatccaccagtttaaccgcgacgtggaggatgagattctttgggtt
gaggagaggatgcctcttgctacgtcgacagaccatggcaacaatttacaaactgttcag
ctacttatcaagaagaaccagacattacagaaggagatccagggccatcagcctcgctgt
gacgacatatttgagcgcagccagagcatcctgaaggccgacagccccaacgtggagtcg
atccgagcccgtctgaccgacctgcagcagctgtggagcctgatcatccaggagacggag
aaacgccacaccagactcgaggaggcccataaggcccagcagtactacttcgatgcagct
gaagctgaagcctggatgagcgagcaggagctctacatgatgtctgaagagaaggccaaa
gatgagcagagttcagtggccatgctgaagaaacaccagatcttggagcaggcggtggag
gactatgctgagactgttcaccaactgtccaagacgagccgaggcctggtggccgccaac
caccctgagagtgagaggattggcatgcgccaatcacaggtggataaactgtatgctgga
ctgaaggacctatcagaggagaggagaggcaaactggaggagaggttccgcctcttccag
ctgaaccgggaggtggacgatctggagcagtggatagccgagagagaggtggtggctgga
tctcacgagctcggccaagactacgaacacgtcactatgctgcaggaacgcttccgtgaa
ttcgcccgggacaccggaaacatcggtcaggagcgcgtggatggcgtcaaccgcatggcg
gacgagctcatcaacgctggccacgccgacgccgcgactgtcgccgagtggaaggacggt
ctgaacgaggcctgggccgatctgctggagctcatcgacacgcgtacgcagattctcgcc
gcatcctacgagctgcacaagttctaccacgacgccaaggaaatcctgggacgcatcctg
gacaagcataagaagcttccagaagagctgggccgagaccagaacacggtggaaaccttg
cagaggatgcacaccacatttgagcacgacatccaggcacttgggacgcaggtcaggcag
ttgcaggaagatgccgtgcgcctgcagtcagcatatgctggagacaaagccgacgacatc
cagcggcgtgagggcgaggtgctcgaggcctggaggagtcttctggaagcctgcgagggc
cgacgggcacgactgctggataccggagacaagttccgcttcttcagtatggtgcgtgac
ctcatgctctggatggaggacgtcatccgccttatcgagactcaggagaagcccagggat
gtgtcatctgtggagcttctcatgaacaaccaccagggtatcaaggctgaaatcgacgcc
cgtaatgacagtttcacggcctgcatcgagctgggcaagtctctcctggcacggaaacac
tatgcatcagaggagattaaagagaagttgctgcagttgacggacaagaggaaagatatg
attgacaagtgggaggacagatgggagtggctgagactgattttggaagtgcaccagttt
tcgcgggacgccggcgtggcagaggcatggctgctgggacaggagccgtatctgtccagc
agggagatgggacagagtgtggacgaggtggagaagctgatcaaacgacatgaagcgttc
gagaaatcagccgcgacctgggaggaacgcttctcagcgctggagcgactgactacgttg
gagttattggaagtgagaagacagcaagaggaggaagagaggaagaggaaaccgcccacg
ccggagccggtccaggcgcaggacgcagagacacagcagagagaaggagagcagattgcc
cagaacggactaccatcagaccaggactcgccacgggatggagtggacggcgagatgaac
ggagtggccgagaggagctcgaaggagccgagtccgatcccgtcaccgaccgcagacaga
cgggggaaaggcagccaatccgcaacgctgccggctaaaggtcaggagacgccgtccgcc
cagctggagggattcctgcaccgcaaacacgagtgggagggacacaacaagaaagcgtcc
agcagatcctggcataacgtgtactgtgtcatcaataaccacgagatgggcttctacaaa
gacaataagagcgcggctcagggcatcccgtaccacaacgagatccccatcagcctgaag
gacgccgtctgcgaggtcgccgttgactacaaaaagaagaagcatgttttcaagctcaga
gttactgacggaaatgagtatctcttccaagccaaagatgatgaggagatgaacacatgg
attcaggccattcagaacgccggcagcggctcctcgtcctccgagaaatccgagatcacg
cctagcaaccagagcacgcccgcctccagccgcgcccacacgctcccggcaaccgtcacc
ctgacgaccgaatccagccccggcaagcgcgagaaagacaaggagaaggacaaagagaag
cgcttcagtctcttcagcaagaagaagcagtag
DBGET
integrated database retrieval system
