Megalobrama amblycephala (Wuchang bream): 125256517
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Entry
125256517 CDS
T08212
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125256517 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mamb03021
]
125256517 (taf4a)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256517 (taf4a)
Transcription machinery [BR:
mamb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125256517 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
125256517 (taf4a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125256517 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
AAA_23
Motif
Other DBs
NCBI-GeneID:
125256517
NCBI-ProteinID:
XP_048028530
LinkDB
All DBs
Position
LG21:complement(15628572..15652061)
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AA seq
822 aa
AA seq
DB search
MVTTLIGTSTVQTLNGGNAMDSHTESGTSVSSGPSSSSDEASTSVPVVNNGPGVAKGHGN
VTVTPNPNTVIQSSYGNPPASAASSAGPSVTVVRPSMQTAGTGLTINGSNNNTTVSATVA
NVATPGITTTSTTTTTCTTTTTPLLMNQTPASVSASKSESPKTIIQSAGGMTLGPGVAKG
AVLQGVARTAAPATVAAAAASSPAIRAIAPQVLAPRLPQSNPGQNIQNIQLPPGMVLVRS
DSGQLLMIPQQMLAQMQAQSQAARPAAPTSTTPGQITTAQAPGTPLMARQVTPTTIIKQG
SPTPSSTATTTLQRPPVQQASSVGAVLSVQAGTAQRTVTAATGTTVSSATETMENVKKCR
NFLSTLIKLATSGKQSSETVANVKELVKNLLEGAIEAEEFTSRLYKELNSSPQPYLVPFL
KRSLPALRQLTPDSTAFIQQSQALQAPTVVLTSPNTAGATGTAPRTLVQPALSNSSQTAS
LVLQPPQQGAIVKPPQVTLTTTPMVTLRGQPHSHIVVGQPQVQLKQIQTVAVKQGVVSST
KLAPGSVSVAIAQKNKAKDGAGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGAV
TRSCKDEAFLSATMLQHKILEIGQRFGVTELGPEVVNIVSHATQQRLQNLLEKVSLIAQQ
KNMTYKEDSRYEQVEDVRSQLKFFEQLDQLEKQKKEEQEREILMKAAKSRSRQEDPEQLR
LKQKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPSFGTDAEGSGLCASASGGLN
AGASRQFTRQRITRVNLRDLLFCLENERSTSHSQLLYRALLK
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgatcgggacgtccacagtgcaaactttgaacggaggcaatgcaatg
gattcgcacactgaaagcggcacttcagtgtccagtggcccatcatcatcatcggacgag
gcttcaacttctgtaccagttgttaataacgggcccggggtggcgaaaggacacggaaac
gtcactgtcaccccaaacccaaatacagtgatacagtcttcttacgggaatcctccagca
tccgcagcatccagtgcaggaccctctgtgacagttgtcaggccatctatgcaaactgct
ggaacaggtttaactattaacgggagtaataataataccaccgtttcggcgactgtagcc
aatgtagcgaccccgggaataactactacttctactactactacaacttgtactactaca
acgacacctcttttaatgaaccagactcctgcctctgtctccgcgagcaagtccgagtcc
cctaaaactatcatacagtccgccggcggcatgactctcggtcctggagtggctaagggg
gctgttttgcagggggttgcgagaacagcagctccggcaactgttgcagcagcagcagca
tccagccctgccatcagggcaattgcgccacaggtgttagcgccccgactccctcagagc
aaccctggccagaacatccagaacatccaactacctccaggtatggtgttggtgcgtagt
gacagtggtcagttgctgatgatccctcagcagatgttggcacagatgcaggcccagtct
caggccgcccgccctgctgcccccaccagcaccacccctgggcagatcacgactgcacag
gcacctggaactcctctaatggcccgacaggtgacccctaccaccatcataaagcagggc
tctcctacacccagcagcacggccactaccacactccagagaccacctgtacagcaggcc
tcctctgtgggtgcagtgttgtcagtgcaggcaggaactgcccagaggactgtgactgct
gccacggggaccaccgtctcctcggcaacggagacaatggagaatgtaaagaaatgtagg
aacttcttgtccacgctgataaagctggccactagcggtaagcagtcatcagagactgtc
gctaacgttaaagagctggtcaagaacctgctggagggggcgattgaagcagaggagttc
accagcaggctctacaaagagcttaactcgtctcctcagccttatctagtgcctttcctg
aagaggagtcttccagctctgcgacagctcactcctgactccacagccttcatccagcag
agccaggccctccaggcacccactgtggtgctgaccagccccaacactgctggagccacc
ggcacagcccctcgcacgctcgtccagcctgccctcagcaactccagccagaccgcctct
ttggtgttgcagcctccacagcagggggcaatagtgaagccccctcaggttaccctgaca
accactcctatggtaacgctcaggggtcagccccacagccacatagtggtgggtcagcct
caggtgcagctcaaacagatccagacagtggcagtgaagcagggtgtggtgagtagcact
aaactggctcccggctccgtgtctgtagcgatagctcagaagaataaagctaaggatggt
gctggaggaactttcagggatgatgacgacattaatgacgtggcctcaatggcaggtgtt
aatctttcggaggagagtgcccgtatcctggccaccaactctgagctggttggcgcggtc
acgcggtcttgtaaggatgaagctttcctctccgccactatgttacagcacaagatacta
gagataggccaaaggtttggagtgacagagctgggtcccgaggtcgtgaacatcgtctct
cacgccactcaacagagactgcaaaaccttctagagaaggtctcgctgatcgcccagcaa
aagaacatgacttacaaggaggacagtcggtacgagcaggtggaggatgttcgctctcag
ctgaagttctttgagcaacttgaccagttggagaaacaaaagaaagaggaacaggagaga
gaaattttaatgaaggcagctaagtcacgctcgcgacaagaggaccccgagcagctgcgg
ctgaaacagaaggccaaagagatgcagcagcaggaattggctcagattcgacagagagac
gccaacttgacggcgttggcggctatcggacccagaaagaaaagaaaactggattctcct
tcatttgggactgacgcagagggctcaggtttgtgcgcaagtgcatccgggggcttaaat
gcaggagcgtcgaggcagttcactcgccagcgcatcacgcgtgtaaacctcagggatctg
ctcttctgtctagagaacgagagaagcaccagccactcacaactgctctaccgagccctt
ctcaaatag
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