Megalobrama amblycephala (Wuchang bream): 125256534
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Entry
125256534 CDS
T08212
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a
KO
K14966
host cell factor 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03083
Polycomb repressive complex
mamb04980
Cobalamin transport and metabolism
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
125256534 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
125256534 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125256534 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125256534 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256534 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
mamb03029
]
125256534 (hcfc1a)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125256534 (hcfc1a)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
125256534 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
125256534 (hcfc1a)
MLL-HCF complex
125256534 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
125256534 (hcfc1a)
Mitochondrial biogenesis [BR:
mamb03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
125256534 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
125256534
NCBI-ProteinID:
XP_048028563
LinkDB
All DBs
Position
LG21:complement(21452060..21477717)
Genome browser
AA seq
1848 aa
AA seq
DB search
MTSPGSVVPGTTGAPLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKPKAPKNGAPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSNVVGWDVPVTYGVLPPPRESHTAVIYTEKTTKKSRLVIYGGMSGCRLGDLWTLDIDT
LTWNKPAISGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDTLSWETVLMDTLEDNIPRARAGHCTVAINNRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPNPPSRVQLVRANTNSLEVSWGAVSTADMYLLQLQKYDIPTATAATSPALNAAPSL
PGNSPKSPAPAAAAPSAQSLPHSGITLVPQAASPTASVLPTTPASPLAASTARGPAILKV
AAPQSGTGASIVTVRQASQAGKSPVTVTSLPAGVRMVVPPQTTQGTAIGSSPQMSGMAAL
AAAAAATQKIPPSPGATVLNVPAGATIVKTMAVTPGSTTLPTTVKVASPVMVSNPATRML
KTAAAQVGTPTVSSPTTGARPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPLSM
GGNLISNLGKMVSMVQTKPVQSAAVTGQATSNPLTQIIQTKGPLPPGTILKLVTSADGKP
TTIITTSQAGGTGNKPTILGISGMSPTTTKPGTTTIIKTIPMSALQQGAAGVTSSTGMKS
PITIFTTKVMTSGTGTPGKIITAVPKIGTAGGQQGLTQVVLKGAPGQPGTILRTVPMGGV
RLVSPVSGVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGSLASANATLATPITTLGTI
ATLSNQVINATAVSAAQTNLTTVTSNMQPTQVTLITTPSGVEAQPGQDLPVSILASPTSE
QPTSTESGAGDASGSVTLVCSNPPCETHETGTTNTATTATANMGTGPAGTVQRVCSNPPC
ETHETGTTNTATTASSNMGTVQRVCSNPPCETHETGTTNTATTASSSMGTAPAGMVQRVC
SNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNTATTASSNMGA
NQTGAVQRVCSNPPCETHETGTTNTATTASSNMGGNQTGTVQRVCSNPPCETHETGTTNT
ATTASSNMGGNQTGEVQRVCSNPPCETHETGTTNTATTATCSMETDEGTAQQSGEASESA
TSTESLPSTAAPQSRAITTVTQATPLPGPAVPSISSITESSSEAGAEPIVMETSEAESLQ
TEGQAEAEAVAMQAEFQAEAGAVAMPSDFQAEAAALPSDFQGEAVAVAMQAESQAEAGAV
PMEHDTSSMAEGETAQEQLPTAEMEGVEAASASQAEALALPPELMSDGQPTTLMVTGLTP
EELAVTAAAEAAAQAAASEEAQALAIQAVLQAAQQAVMSSGDGDAGGEDQQTHTIPIVLT
QQELAALVHQQQQLQAAQQQAAAQAAQAALPTEGLAPADSLNDPSSESNGHNEMAAAATS
AVAGLLPRTTAETLAPSSTLAPVVVASPAKMQAAATLTEVANGIEAGKQNPATVTVKPQV
KKENQWFDVGIVKVTNMVVTHFYMPADDSAYVEDDSGTIPDYSQMKRVELQPGTAYKFRV
AGINICGRGAFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSMTSGKITEYSVY
LAIQSSQTTEAKPSAPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARN
EKGYGPATQVRWLQESNKDGLSAKPAPKRAVSSPDTKGIGQKKARMDQ
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcccccggttccgttgtgcctgggaccaccggagctccactgcagccgcgatgg
aagcgggttctggggtggtccgggccggtaccccgaccgaggcacggacacagggccgta
gccatcaaggagctgatggtcgtttttggtggaggaaacgaaggaatcgttgacgagttg
cacgtttataatactgcaacaaaccagtggtttataccagctgttcgcggagacattcct
ccaggctgtgcggcttatggttttgtatgtgatggtacacgtctattagtgtttggtgga
atggtggaatatggaaagtacagcaatgacctttatgagctgcaggcaagcaggtgggaa
tggaaaaaattgaaaccaaaagcccctaaaaatggagcgccaccatgtcctcgtctgggc
cacagtttttctcttgtgggcaacaagtgctatctttttggggggcttgccaatgacagc
gaagaccccaagaacaacattcccagatatttgaatgacctttataccctcgaactgcgt
ccgggctccaatgttgtgggctgggatgtaccagtcacatatggagtactgcctcctcca
agagagagccacactgctgtaatttatactgaaaaaactactaagaagtcccgccttgtt
atatatggaggaatgagtggttgtcgtttgggagatctctggacattagatattgatacg
ctgacctggaacaagcctgcaataagcggcactgctcccctcccccgtagcctccactca
gccaccactattacaaacaaaatgtatgtttttggtggctgggttcccttggtgatggat
gatgtgaaggtggccacacatgagaaggaatggaagtgtacaaacacacttgcctgcctg
aacttggacaccttgtcatgggagactgttttgatggacactttggaggacaacatacca
cgtgcacgagcaggacattgcactgttgctattaacaacagactttatgtctggagtgga
cgtgatgggtaccgcaaagcttggaacaatcaggtgtgctgcaaagacctgtggtacctg
gagaccgagcgccctaatcctccttcacgggtacagctcgtccgggccaacacaaattct
ttagaggttagctggggagcggtgtctacagcagacatgtacctgcttcagcttcagaaa
tatgatatcccaacagccactgctgccacatcaccagccctcaatgcagctccctccctc
cctggaaactcgcctaagagtccagcgcccgctgcagctgctccatctgctcagagtctg
ccgcatagtggcatcaccctcgttccacaggctgcttcccccacagcctcagtcttaccc
accacacccgcaagtcctctggcagcctcaacggcgcgtggcccagctattctgaaagtt
gcagcccctcagtcaggcaccggggcatcgattgtcactgtgcgccaagccagccaggct
ggaaaatccccagtcactgtgacatcacttcctgcaggggttcgcatggtagtgccacca
cagaccactcaaggaacggccattggcagcagccctcagatgagtggaatggcagcttta
gctgcagctgctgcagccacacagaaaatccctccttcccccggagccactgttctcaat
gtgccggctggggccacaattgtaaaaacgatggctgtgactcctgggtccaccactctc
cccaccacagttaaagtggcatcacctgtcatggtaagcaaccctgccactcgcatgctg
aagaccgccgctgcacaggtgggaactccgacagtgtccagtcccactacaggtgctcgg
cccatcatcacagtgcacaagtccggcacagttaccgtagcccagcaggctcaggttgtg
accactatggtgggtggagtcaccaagaccatcactcttgtcaagagcccactttccatg
ggaggaaacctgatctctaacttgggcaagatggtgtcaatggtacagaccaaaccagtc
caatcggctgctgtgactggacaggccacctctaacccactgactcagattatacagaca
aagggtccccttccacccggcaccattctgaagctggtaacatctgcggatggaaaacca
accaccataattaccaccagtcaagcaggtggcacaggaaacaagcccactattttgggc
atcagtggcatgtcccctactaccaccaaaccgggcaccaccactatcattaaaacaatc
cccatgtctgctctacagcagggagctgcaggtgtgactagtagtacagggatgaagagc
cctattaccatcttcaccacgaaggtgatgacatctggaacaggaactcctggcaaaatc
attacagcagtgcctaagattggtacagcaggaggccagcaaggcctaacacaggttgtt
ttgaagggagcccctggtcagcctggaaccattcttcgcaccgtgccgatgggaggagtg
cgtctcgtgtctccagtatctggagtcaagccgactgtaaccacgttggttgtcaaagga
acaactggtgtaacaactcttggcacagtcacaggaaccgtttctaccagtttagccgga
ggaagcctagccagtgccaatgccaccctggcaacccccatcaccactctgggcacgatt
gccaccctctccaaccaggtcattaatgctaccgctgtgtcagctgcacagaccaacctg
accacagtcacgtccaacatgcagcccacccaggtgactctcataactacacccagtggt
gtggaagctcagcctggccaagatctgcccgtttccattctggcctctcccacatctgag
cagcccacctctactgagtctggtgcaggcgatgcttctggcagtgttactctagtgtgc
tccaacccaccctgtgagactcatgagacgggcaccaccaacacggccaccacagcaacg
gcgaatatgggcactggaccagctggcacagtacagagagtgtgctccaacccgccctgc
gaaacacatgaaacgggtacaacaaacactgccaccacagcatcttccaacatgggcact
gttcagagggtctgctcaaacccaccatgcgagactcacgaaacgggcaccaccaacaca
gcaaccacagcatcttcaagtatgggcactgctcctgctggcatggtgcagagggtctgc
tcaaacccaccctgtgaaacccacgagacgggcaccacaaatacagcaaccacagcttcg
tctaacatgggcggaaatcaaacaggaacggtgcaaagggtctgttcaaacccaccttgt
gagacccacgagacgggtaccacaaacacggccacgacggcttcatctaacatgggcgca
aaccaaacgggagcggtgcagagagtttgctcaaatccaccttgtgagacccacgagacg
ggaaccacaaacacggccaccacggcttcatctaacatgggcggaaatcaaactggaacg
gtgcaaagggtctgttcaaacccaccttgtgagacccacgagacaggcaccaccaacaca
gcaaccacggcttcatctaacatgggcggaaaccaaacgggagaggtgcagagagtttgc
tcaaatccaccttgtgagacacatgagacgggcaccaccaacacagccaccactgccacc
tgcagtatggagacagatgagggaacagcccagcagagtggtgaagcgtcagaatctgcc
accagcacggagagcctgccgtccactgcagcgccccagagcagagccattaccacagtc
acacaggccacgcctctaccaggaccagctgttccatctatatcttccatcacggagtca
tcctcagaggcaggagctgagccgatcgttatggagacctcggaggcagagtccttgcag
actgaaggccaggctgaagcggaggcagttgccatgcaggcagagttccaggcagaggcg
ggggcagtagctatgcccagtgacttccaggcggaggcagcagccttgccaagtgatttc
cagggagaagccgtggcggtagccatgcaggcagagagccaggcagaggcaggggcagtg
cccatggaacatgacacttctagcatggcagagggagaaaccgctcaagagcagctacca
acagcagagatggagggtgtagaggcggcatcagcatcgcaggccgaggcgctggccttg
ccaccagaactgatgtcagacggacaacccacaacgcttatggtaacgggtctgacccca
gaggagctggccgttacggcagccgcagaagcagcagcccaggctgcagcatcagaggag
gcccaggccctcgccatccaggctgtactgcaagcagcacagcaggctgttatgagttca
ggtgacggagatgccggaggagaagaccagcagacccacaccatacccatcgttctgacc
cagcaagaactagcggctttggttcatcagcaacagcagctccaggcagcccagcaacaa
gccgctgcccaggccgcccaggccgcactgcccaccgagggcttggctccggctgacagt
ctaaatgatccctcgtcagaaagcaatggacacaacgagatggccgctgctgccacaagt
gcagtagccggactgctgccacgcaccacagcagagaccttggctccatccagcacatta
gcacctgtagtagttgccagtccagctaagatgcaggcagctgcaactctcactgaagtg
gccaatggcattgaggctgggaaacagaatcctgccactgttacagtcaaacctcaagtg
aagaaagaaaaccagtggtttgatgttggcattgtcaaagtgaccaatatggttgtaaca
catttctacatgcctgcagatgactctgcttatgttgaggatgattcaggcacaatccct
gactacagccaaatgaagagggtggagcttcagcccgggaccgcctacaagttccgtgtg
gcgggtataaacatttgtggccgtggagccttttctgaaatatctgctttcaagacctgt
ttaccgggcttcccaggagcaccatgtgccataaagatcagcaagagtccagacggtgcc
caccttacttgggagcctccatcgatgacatcaggaaagatcaccgagtactcagtgtat
ttggccatccagagcagccagaccaccgaggcaaaaccctcggccccggcccagcttgcc
ttcatgcgtgtatactgtgggccaaacccctcctgtctggttcagtcctccagcctgtcc
aatgcgcacatagactataccaccaaacccgccatcatcttccgcatcgccgctcgcaac
gagaaaggttatgggccggctacacaagtgcgatggctgcaagagtctaacaaagatggt
ctttctgcaaagcctgccccaaaaagagcagtttcttcaccagatacaaaagggattggt
cagaagaaggcaagaatggaccagtaa
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integrated database retrieval system
