Megalobrama amblycephala (Wuchang bream): 125256620
Help
Entry
125256620 CDS
T08212
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125256620 (pcdh17)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125256620 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
125256620
NCBI-ProteinID:
XP_048028721
LinkDB
All DBs
Position
LG21:complement(24654469..24738257)
Genome browser
AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNSKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSDQIDIDISENAAPGTRFPLAAAYDPDTRENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFDQPSYVV
EIPENSPPGMVLINLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGIIKIQGKID
FEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPNANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCVNCTEECRVLGHSDRCWMPQFPVGAGGAGTPQAEGSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCSTGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYISPNKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMDCVLEQGGGEMGRGTMDADQVVRDIDKLLQDCRGNENTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacgttgaaaaac
ttgaactactcaatacctgaggagaaaattcagggtgtcattggaaacattgccaaggat
gcggagcttgaactgggagagcaggggaaaaaatccaacttcagggtgttggagaactcc
gccccacaccttattgatgtggatcccgaaagtgggctattatacactaagcagcggatc
gacagggaaacactgtgcagacaaaactccaagtgccagctctccatggaagtgtttgcc
aatgacaaggagatctgcatgattaaagttgagatacaggacataaatgacaacgcaccg
agctttccttctgatcagatcgatattgacatatctgagaatgcagccccaggcacacgt
ttccccttggctgctgcctacgaccctgacactagggaaaatggcctgaaaacatatcag
atcacgcgggatgattacagtatattctctttggatgtcaagtccagaggggatggaact
aagttccctgaattggtcgttcagaggtccttagatagagaggaacgtagccatcacact
ttaattataaccgccacagatggtggggaatatcccaaatcaggcacaatgcaaatcaat
gttaaagtcactgattccaatgacaacagccctgtgtttgatcagccctcatatgtagtc
gagattcctgagaattcacccccaggcatggtactgataaatttaaatgctacagatcct
gatgaaggcattaatggccaggtcacttattcctttagctgttatgtcccagacaggatc
aaagagttgttctcaatagacccccgaacgggcatcataaagattcagggtaaaatcgac
tttgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaaccca
attcctggccattgtaaagtcacagttaaagtgcttgacaggaatgacaactggccgtca
ataggtttcgtagcagttcgtcagggggcggttagtgaagcagcaactcctgggacagtg
attgcgcttgtcagagtcacagacaaagactcaggccgcaatgggcagctccagtgtagg
attttggggaacgttcccttcaaactagaggagaactatgataacttctatacagtagtg
actgacagacctctggacagggaggtaaaagatgagtataacattactattgtggccaaa
gacaatggaaaccctcccctgaactcgacaaagtctttcactgttaagattttagatgaa
aatgacaatgcaccccgcttcacaaaaatggtctaccttctccaggtgcctgaaaacaac
atcccaggggaatacttgggttctgttctggcccatgacccagatttaggccaaaacggt
actgtgtcctattccctccttccctctaatgtaagcgaggaatctattactacatatgtt
aacatcaaaccaactgatggtgcaatttatgccctgaggagttttaactatgaacaaacc
aagtattttgactttaaggtccaggcgaaggattcaggaaaccctcacctggagagcaac
accactgtccgtgtgagtgtgctggatgttaatgataacattcctgtcattgtccttcca
ttacttcagaatgacactgctgagatccatgtacctcggaatgtgggagtcggacacatt
atcaccaccgtgagagcggtggacaacgactttggtgagagtggtcggctcacctacgag
atctcggatgggaatgaggaacacctgttcgagattgattcggtgacaggcgaggtacgg
acagcacagccactgtgggaggaggtggcacctgttgtggaactcatcatcaaggtcact
gaccatggcaagccgtcactttccgccatggcgaagcttatcgtcaaagcctactcgggt
cccttaccggagggtgaaccacgcatcaacgcggaacaccacaactgggacatgtcgctt
ccgctaatagtaactctgagtataatctcgatcatgctccttgcggccatgatcaccatc
gcagtcaagtgcaaacgggagaacaaggagatccgcacatacaactgtcgcatcgctgag
tacactcacccgcaactcggcaagggcaagaagaagaagatcaacaagaacgacatcatg
ctggtgcagagcgaagtggaggaacgggacaccatgaacgtgatgaacgttgttagcagt
ccatctctggccacctcgcccatgtactttgactaccaaactcgtctgcccctcagctct
ccaaggtcagaggtcatgtacctcaaacccaatgccaacaacctcagcgttcctcaagga
catgttggctgtcacaccagcttcaccggacctgttacaaacaccactgagacgccagtg
aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacgttcaaagatccagagcgagccagtctcaga
gacagcgggcacggggacagcgaccaagcggacagcgatcaggacactaataaaggctcc
tgctgtgacatgtccgctaaagaagctctcaagatgaaggctactggcctcaagcctcaa
ccacttgagcaggaggaggattgtgtgaactgcacagaggagtgtcgagtgctgggtcac
tctgaccgttgttggatgccccagtttcccgtgggggccggaggagcaggaactccccaa
gccgagggctccgactaccgcaccaatctcttcgtccctgccggcatggaagcggtcgca
gtggagaccgagacttacgagactgtttgcaaccccaacggcaaaaaaactttctgcaca
tttggaaaggagcgtcgggaccacaccatcctggtggcgaatgttaaaccctacctaaag
accaaacgtgctctcagccctctcttgcaggaggtcccgtctgcctcatgtagtcccacc
aaaggctgcagtacaggttccccgtgctcttcggccaaaggcatgggcgacggagcagag
ggcaagcccagcaccagccactacggacccccagacggacagtacatctccccgaacaag
cagaacaaagagcagggctactccacgctgcctccctctgaccccgtggccaaagtcctg
gctgaagcacgttcacggatcagccaggagacggcagtggaaatggactgcgtcttggag
cagggcggaggagagatgggccgaggcaccatggacgcagaccaggtggtcagagacatc
gacaaactcctgcaggattgtcgaggaaacgaaaacacccctatcagaaagtaa
DBGET
integrated database retrieval system
