Megalobrama amblycephala (Wuchang bream): 125256728
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Entry
125256728 CDS
T08212
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
125256728 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125256728 (depdc5)
Membrane trafficking [BR:
mamb04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
125256728 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
FAM104
Motif
Other DBs
NCBI-GeneID:
125256728
NCBI-ProteinID:
XP_048028901
LinkDB
All DBs
Position
LG2:complement(34933894..34972022)
Genome browser
AA seq
1608 aa
AA seq
DB search
MTVTMKANKSYKLVVHKKGFGGSDDELMMNPKVFPQVKLGDIVEIAHPNDEYSPLLLQVK
SLKEDLQKETISVDQTVAQAFKLRAYQDVVINIVDPKDVTLDLVELTFKDQYIGRGDMWR
LKKSLVSTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQ
MSCEMWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYSAKSLDEFPE
MQRASVRQDHEGRYYEDFYRVVAQNERRDEWTSLLITIKKLFIQYPVLVRLKVADGYPCG
HNSTSAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQR
MIDNGIGVDLVCMGEQPLHAVPLFKLHNRTVHGDSRIGDDYNLPHWINHSFYTSKSQNSC
SCFTPRIKLAGKKAQAEKARSSKEHSLGAPKDAENSLPIQVDYDAYDAQVFRLPGPSRAQ
RSTNFRSSRDRESASRKSWGSSDVGGGIVGNSPPTRPTGPDEQRSLASDDSLGHISNILL
IPRPAQGQYEVSSSLGYTSCTRELLEKMVESQRDSSAPGRFTVGSAESTLHVRPGGYTPQ
RALINPFAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSEQRDPART
SAELLELAYHEATGSKRTVSRYAGENGLYISGVPDNVSGSPASSNSTGTPVNRGSFEDYS
SILDPILLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQTLQNDYTEGCYDLL
PHTDLDRRDDESPVMTAHQVFEEFICQRLMQGYQIIVQPNRKSQPAIAPPLSSSPLYSRG
LVSRRKPEDEESLYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESTQIQYSYNLCPPHAD
ASFLPFWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DVEGHWDVYGEVTGAGRDGLSGTGDWSLLDGFIRFLEGLNRIRRRHRSDRIIRKGATIKG
LQVTGALSSYNPEPIAPPVGKKGTSALSALLELDQTQKSLEEQQLAAQHGGKPCGPFSEA
ASVALTTTYVDSPRKDAAFILDFIRSPRSSYICHSQLPAEQVPANPIEGGSSDKGGNQPG
ERTSATSQATGDSTPGTGSETGGQLGSSGLCLSSSSTLMEILEAIKHPTTGVQLLPEQRG
LPPNCFVSAEVVHWLVSTVENIATQGIAVEIMQKMLDEGLITHASGDAMRTFVYGFYFYR
IVDKDSEKAPTTQLPPAGANVWSPAALEDLTLFQRKWFEVAFVMEERRPCDLPAFLLPWL
PSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHG
NFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALSSYLYGDPLR
AQLFIPLNIQCLLKEGCDNLFDGFEPETYWDRMQLFQEAILSRFGFVQDKFSASAFNFPS
ENKPQYIHVTGTVFLQLPYSKRKYSSGQRRRRNSTTSASQSLFGSEERVGYNWAYNTMLT
KVWRTGVLGDEKLADRLLRDFTDFCANKDNRLVTFWESCVEKMNTSAP
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccatgaaggcgaacaagtcatacaagcttgtggtgcacaagaagggcttt
ggaggcagtgatgacgagttgatgatgaatcctaaagtttttcctcaggttaaactgggg
gatatagttgagattgcacatccaaatgatgagtacagtcctctgctgctgcaggtcaag
agtttaaaagaagacctgcagaaagaaactatcagtgtagatcagacagtagctcaggcc
ttcaagcttcgtgcctaccaggacgtcgtcatcaatattgttgatccaaaggatgtgact
ttggatctggtggagctcaccttcaaagatcagtatattggacgaggagacatgtggaga
ctgaagaaaagcttagtgagcacttgtgcgtatgtaacacagaaagtagagtttgcagga
atcagggcccaggccagtgaattgtgggttaaaggagagaaggtcacttgtggctacatt
agtgaagatacaagggtggtatttcgatccacctctgcgatggtttatatattcattcag
atgagctgtgagatgtgggactttgatatctatggtgatctttactttgagaaagctgtc
aatggtttcctctcagatctgtttgccaaatggaaagagaagaactgcagtcatgaggtt
acagtggtgctgttctctcgtaccttctactcggccaaatcactggatgagttcccagag
atgcaaagagcgtcagtccgacaagatcatgaggggcggtattatgaggatttctacagg
gtggtagcccagaatgaaagacgtgatgagtggacgtctctgctcatcaccattaagaag
cttttcatacagtatcctgtgctggtgcgtcttaaagtagcagatggatatccatgtggg
cataattccacttctgctcagggaaattatctggaagctataaacttgtctttcaatgtc
tttgataagcactacatcaaccgtaactttgatcgtacgggtcagatgtcggtggttatt
actccaggagtgggcgtgttcgaggtggaccgcttgctcatgatcctcaccaaacagcgc
atgatcgacaatggcatcggtgtagatctggtatgcatgggagagcagcctctccacgct
gttcctctcttcaagttacataaccgcacagtgcacggagactccagaattggcgatgac
tacaacctgcctcactggatcaaccacagtttttacacatcaaagagccagaactcatgc
agctgttttacaccacggatcaagctggctggaaagaaggctcaagctgaaaaagccaga
agcagcaaagaacattctcttggtgctccaaaagatgctgagaacagccttccgatccag
gtggactatgatgcatacgatgctcaggtcttcagacttcctgggccctcaagagcccag
aggtccaccaacttcaggtcgagtcgggacagggagtcagccagcaggaaaagctggggc
tcatcagatgtcggtggaggtatagtgggcaactcacccccaacaaggcctacaggacca
gatgaacagaggagcctggcatcagatgacagtttgggacacatctccaacatcctgctc
atcccacgtccggctcagggccaatatgaggtcagcagctccctcgggtacaccagctgc
acaagagaattgctggaaaagatggtagaatcccagagggactccagtgctccaggccgc
ttcacagtgggcagtgctgagtccacccttcatgtacggccgggcggttacacaccccag
agggccctcatcaacccgttcgccccctcacgcatgccaatgaaactcacctccaaccgt
cgccgctggatgcacacgtttcctgtgggtccttctggagaggcaatccagatccaccat
cagacacgacagaacatggcagagctgcagggcagtgagcagagagacccggctcgtacc
tctgcagagttgctcgaactggcctatcacgaagccacgggaagcaagcggacagtgtca
cgttacgcaggagagaatggactgtacatcagcggagttcctgacaatgtatctggaagc
ccagctagtagcaacagcactggaacaccagtgaaccgtggttcttttgaggattattcc
agcattctagatccgatcctgctgctgtctgcccctccgacagtgcctagtttttgctgc
acggtcggggtggactggaagtccctcaccactcctgcctgcctccccctcacgaccgat
tactttcccgaccgccaaaccctacagaatgactacacagagggctgctacgacctgctg
ccacacactgacctggacagacgtgacgatgagtctccagtgatgacggcccatcaggta
tttgaagagttcatctgtcaacgactgatgcaaggttaccagatcattgtacagccaaac
aggaagtcacagcctgctatagccccacctctcagcagcagcccactttattccagaggg
ctggtgtctcgccgtaaaccagaggatgaagagagtctttactggctcagtatgggcaga
acctttcataaagtctgccttaaagataagatcattaccgtcacccgctacctcccaaag
tatccatatgaatccacacagattcagtacagctacaatctgtgccctccgcatgcagac
gccagcttcctgccattctgggttgagttcagccatgagcggctggaggagtacaaatgg
aactacttggaccagtacatctgttctgcaggctcagaggacttcagtcttattgactct
ctgaaattctggcgcacacgcttcttgctgctgccagcgggtggagccaggcgagtggcg
gatgttgagggtcactgggacgtgtatggggaggtaacgggggcagggcgggatggcctc
tctggcacaggggactggtctcttttggacggatttatccgctttttggaaggcctgaac
aggattcgtcggcgtcatcgatctgatcgaattatccgtaaaggagctactattaaaggc
ctgcaagtgacaggggccctgtcatcctacaacccagagcctatagcaccccctgtgggc
aaaaagggcacctctgcactctctgcacttctggagctggatcagacacagaagagttta
gaagagcagcagcttgctgctcagcatggtgggaaaccatgtggacctttcagtgaagct
gccagcgttgccttgacaaccacctatgtcgatagcccccgtaaggatgccgccttcatt
ttggactttattcgtagtccacgttcctcctacatctgtcactctcagctgccagctgaa
caggttccagcaaatcccattgagggtgggtcatcagacaaaggaggtaaccaaccaggt
gagagaacatctgctacatcccaagccacaggagactcaaccccaggcacaggttcagag
actggggggcagttagggtccagtggtttgtgtctttcctcatcttccacactaatggag
atactggaagccattaagcatcccaccactggagtgcagcttttgccagagcagagaggc
ctgcctcccaactgctttgtcagtgctgaggttgtacattggctggtgagcactgtagag
aatatcgccacacagggcattgcagtagaaatcatgcagaaaatgttggatgaaggcctg
attactcatgcctccggcgatgccatgcgaacctttgtctatggcttctacttctaccgg
attgttgacaaagacagcgagaaggcccctacaactcagctgcccccagctggagccaat
gtatggtctcctgcagctttggaggacttaaccctgttccagaggaagtggtttgaggtg
gcctttgttatggaggaacgtcggccctgtgacttacctgctttcctgctaccctggttg
cccagccggccagcctcgtacgcaagtaggcatagctccttcagccgcagcttcggagga
cgcagccaagccgctgcactgctagccgccacagttccagagcagaaaacagtcaccttg
gatgttgatgtgaacaatcgcagtgatcgaacggaatggtgcagttgctattaccatggc
aacttctccctcaatgctgcttttgaaatcaagctgcactggatggctgtcactgcagcc
gtactctttgaaatggtgcaaggctggcacagaaaggcagcatcttgtggattcttgctt
gtacctgtgttggaggtgcccttcgctttgtcatcgtacctatatggtgaccctctccgt
gctcagttgtttatccccttaaacatccagtgcctactaaaggagggctgtgataacctg
tttgatggttttgagccagagacatactgggacagaatgcagttgtttcaggaggccata
ctctccagatttggctttgtacaagacaagttctcagcatcagcttttaactttccatca
gaaaacaaaccccaatacatccatgtaacaggtacagtttttcttcagctgccttactca
aaaaggaaatactccagtggacagcggcggcgacgtaactccactacctctgccagtcag
agcctgtttggttctgaagagcgtgtgggctacaactgggcctacaataccatgctgacc
aaagtctggaggactggtgtgctgggggacgagaaactggccgaccgcctgctacgagat
ttcacagacttttgtgccaacaaggacaatcgactggtgaccttctgggaaagttgtgtg
gagaaaatgaacaccagtgccccttga
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integrated database retrieval system
