Megalobrama amblycephala (Wuchang bream): 125256784
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Entry
125256784 CDS
T08212
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03040
Spliceosome
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125256784 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125256784 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125256784 (srsf6b)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
SR proteins
125256784 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125256784
NCBI-ProteinID:
XP_048028953
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All DBs
Position
LG21:complement(625985..632577)
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AA seq
370 aa
AA seq
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MPRVYVGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGGGRSSSGYSSRSRSGRDKYGPPVRTEYRLIVENL
SSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRAIDKLDGTDINGRKIR
LVEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSRSHSRSRSRSRSRSKRRSRSRSGRKSR
SRSGRKSHSKSPTKSRSRKSKSRSRSRTQKSRSRSDARKSRSKSRSKSRSKAKSERDSRS
RSKEKSVSKKSRSRSASPRENGDGERAKSASRSPSPKENRRQSESPGKRSASRSPSRSKS
RSRSRSASQD
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggtgtacgtcggcagactgagctatcatgtgcgggagaaggacatccagagg
tttttcagcgggtacgggaagcttctggagatcgatctgaagaacgggtacgggttcgtg
gagttcgaagacacccgcgacgcagatgacgcggtgtacgagctgaacggtaaagacctg
tgcggggagcgtgtgatcgtggagcacgcccgagggccgcggcgggaccgagatggatac
ggtgggggttatgggggcggcgggcgcagcagtagtggttatagcagcaggagccgaagc
ggaagagacaaatatgggcctccggttcgcaccgagtaccgtctgatcgtggagaacctg
tccagtcgctgcagctggcaggacctcaaggacttcatgcgtcaggccggagaggtgacc
tacgccgacgcccacaaagaacggaccaatgagggcgtgattgagtttcgctcctactcc
gatatgaagagagctattgacaagttggatggcaccgatattaatggaagaaaaatccgt
ctggtggaggacaagcccagacgccgccgttcctactctgggagcaggtccaggtctcgt
agcagacgccgttctcgcagcaggagccgcaggagttcccggagccattcccgctccaga
tctcggtcaaggtcccgcagcaagcgccgctcccgctccaggtccggtcgcaagtcccgc
tccaggtccgggaggaagtctcactccaagtccccgacaaagtcccgctccagaaagtcc
aagtctcggtcccgctcgcgcacgcagaagtcccgctctcgctccgatgcgcgcaaatct
cgttccaagagtcgctccaagagccgctccaaagcgaagtcggagagagattccagaagc
cgctccaaggagaagtctgtgagtaagaaatcccgaagccgctccgcctcgccgagggag
aacggagacggagagagggccaagtccgcctctcgttcgccgtccccgaaagagaatcgc
cgtcagtcggagtcgcccggcaaacgctctgcgtctcgctctccgtctcgatcaaagtct
cgttcccgctccaggtctgcgtctcaagactag
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