Megalobrama amblycephala (Wuchang bream): 125256878
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Entry
125256878 CDS
T08212
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256878
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mamb04812
]
125256878
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125256878
Cytoskeleton proteins [BR:
mamb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
125256878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
Sec7-like_HUS
TOR1L1_N
Cnd1
PDS5
Paxt-1_C
ParcG
Dopey_N
MMS19_C
DUF5740
TAN
Motif
Other DBs
NCBI-GeneID:
125256878
NCBI-ProteinID:
XP_048029112
LinkDB
All DBs
Position
LG21:31790009..31873177
Genome browser
AA seq
1629 aa
AA seq
DB search
MEPNMEYIVAQVTQKEVGRRFQVGPEIIDYILDRQKSHDLEHDQTMLDRMVDSLATSWVN
ASNFKVALLGMDIVSALVTRLQERFKTQIGTVLPSLIDRLGDSKDQVRDQAQSLLLKIMD
QAANPQYVWDRMLGGFRHKNSRTREAVCFCLISTLNVYGAHGLTLSKIVPHICHLLGDPT
SQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSRFDDVQRSGNMILSADKNI
DDDESVDGGRSSSSSKGVSSVRRTGSLRRPSSAKSSGKESSGAGAVDEEDFIRAFEDVPT
VQIYSARELEDSMNKIREVLSNDKHDWEQRVAALKKVRSLLLAGASDYDGFSQQLRQLEG
ALKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAENIMPTLLNLVPNSAKVMATSGMA
AIRLIIRHTHYPRLIPIMTSNCTSKSVAVRRRCYEFLDLLLQEWQTNSLERNIAVLMETI
KKGVHDADSEARSVARKCYWGFHAHFSKEAEHLFQALELTYQKALQSHLKSSDSIMSLPQ
SDRSSSSSQESLNRPLSAKTPVGSNLSRTKVVSSRGSSSSGSLQRSRSDVDVNAAASAKS
RMPAVPTAAPFSSATALPPGSYASLDAAGNVEGRVRTRRQSSETAAGGGASVTDSRGRSR
AKVVSQSQRSRSANPVGGKTHAGSRSSSPGKLLGHSYGRIPRATGTPSDKRSKIPRSQGC
SRETSPSRGREVRGSRIPRPSMSQGCSRDTSRESSRDTSPARGFSPLASHRHSRSTSALT
AGDVLLTDRFGLIHQARISASVNAMRILNTGTEVEAAVADALLLGDSRNKQRPMRRRYES
PGMYSDDDANSDASSACSERSFSSRNGGMPHYLRQTEDVAEILNHCASSNWSERKEGLLG
LQNLLKSQRVLSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHREELQDWLFI
LLTQLLKKMGADLLGSVQAKVQRALDVTRDSFPYDQQFNILMRFIVDQTQTPNLKVKVAI
LKYIESLARQMDPSDFVNSSETRLAVSRIITWTTEPKSSDVRKVSVFLKPRGWGSDETLK
FGLSVSCDVSQTLHSWANEEASGRSSTVASLPGESNLEERCKQAAQMVLIALFELNTPEF
TMLLGALPKTFQDGATKLLHHHLKNNSNAAAVSQASPSSPAGRAPPRHPVTRTSPLSPTN
CSHGGLSPSRLWGWSSKASSPLIPPHPGPATPPLRAHRRAYSPSMLEYDTENMNSEEIFS
SLRGVTEAIQSFSFRSQEEILEPIKRDGKREDTTGVASSGVDPRLSTGVMEGGRTALDNK
TSLLNTPSSRSFSGPWTREYNPYNYSDISAYEKGALAVFDDAEQIRDGRQQDGGENKIMH
PKGFSAGPGQHLEMVGNLLKELSNHSERVEERRAALLELLKVTRDDSLAVWEEHFKTMLL
LLLETLGDKDHTIRALALRVLKEIMRSQPARFKNYAELTIMKTLEAHKDCHKEVVRAAEE
TASTLAGSIHSEQCIKVLCPIIQTADYPINLAAIKMQTKVIERIPQDSLVQLLPDIIPGL
LQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLQQLTGSKMKLLNLYIKRAQTTNSNSS
SSSDVSSHS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacatggagtacatagtggcccaggtcacgcagaaagaggttggacgtcgc
ttccaagttggacccgaaatcatagactacatcctggacagacagaagtcacatgacttg
gaacacgatcagaccatgctggacaggatggtggacagtctggcaacctcatgggtcaac
gcaagtaatttcaaggtggcgctgctgggaatggacatagtgtccgctctagtgaccaga
ctacaggaacgcttcaaaacacagataggaacagttctgcccagtttaatcgatcgtttg
ggcgattctaaggaccaggttcgggatcaagcacagtcgctcctgttaaaaatcatggac
caagcggccaatccgcagtatgtttgggaccgaatgctgggcggcttccgtcataaaaac
agcaggaccagagaagctgtttgcttttgccttatctctactcttaatgtatatggagcc
cacggattaaccctcagcaagattgttcctcatatttgtcatttgttgggagaccccacc
agtcaggttcgagacggtgcgatgaactgcctggtggagatttacagacacgtgggggag
agagtgaggatggatctggggaaaaagggactgccgcaatcacggttgaatgtgattttc
agcaggtttgatgatgtccagaggtctgggaacatgatcctgtccgcagataagaacatc
gacgatgacgagtccgtggacggaggacgttcctcgtcgtcctctaaaggagtgtcgtcg
gtgcggcggacgggatccctgcgcaggccgtccagcgccaagagctcaggtaaagagagc
tctggtgccggagctgtcgatgaagaagacttcatccgtgccttcgaagatgtgccgacc
gtacagatctactcggctcgagagctcgaggactccatgaacaagatccgagaagttctc
tccaatgacaaacatgattgggaacagcgagtggctgcattaaagaaggtgcgttccctg
ctattggccggcgcgagcgactacgacggcttttcccagcagcttcggcagctggagggg
gcgctcaaactgtcggctaaagatctgcgctcgcaggtggtgcgggaggcctgtatcacg
ctcgggcacctgtcgtctgtgttggggaataaatttgatcacggagccgagaacatcatg
ccgacgttactcaacctcgtccccaacagcgctaaagttatggccacgtctggaatggcg
gcgatccgtctcattatacgacacacacactatccacgtctgattcccatcatgaccagc
aactgcacgtctaaatctgtggccgtcagacgacgctgttatgagtttttagatcttctg
cttcaagaatggcagacgaattctctagagaggaacatcgctgtcctgatggaaaccatt
aagaaaggagttcatgatgccgactctgaggccagatcggtagctagaaaatgttactgg
ggatttcacgcccacttcagtaaggaggcggagcatctgtttcaggcgctggaactgacc
tatcagaaagcgctacagtctcacctgaagagctcggacagcatcatgtcactgccgcag
tccgaccgctcgtcctccagctcgcaagagagtctgaatcggccgctttctgctaaaaca
cctgtcgggagcaacctgagcagaactaaagtcgtgagttctcgtgggtcttcttcgtcc
ggttcactccagcgatcgcgcagtgatgtcgatgtgaacgctgcagccagtgccaaatca
cgaatgcccgctgtacccactgctgcccccttcagctctgccacggcgctgccgcccggt
tcctacgcctcactggatgccgctggtaatgtagagggtcgtgtgcgaacaaggcggcag
agttcagagacggctgctgggggcggagcttctgtgactgacagcagggggaggagccga
gccaaagttgtgtcccaatcacaacgatccagatctgctaatccagtggggggtaaaact
cacgcgggcagccgctccagttcacctgggaagctcttgggtcattcttatgggagaatc
cctcgagccactggaacaccgtcggacaagcgcagtaagatcccgcggagtcaaggctgc
agtcgggagacgagccccagccgcggccgagaggtgcggggcagtcgtatcccgaggccc
agcatgagtcagggctgtagtcgggacaccagtcgggagagcagtcgagacaccagcccg
gctcgagggttcagtccgctggcatcccacagacactctcgttccaccagcgcgctgacg
gcgggtgacgtcctgctgacagatcgtttcggtctcatccatcaggcccgtatctcagcg
tcggtgaacgccatgcggatcttgaacacgggcacagaggtggaggcggccgtggcagat
gctctgcttttaggagactccaggaataagcagaggcccatgcggcggcgatacgaatct
ccaggcatgtactccgacgacgatgcgaacagcgacgcgtccagcgcgtgctccgaacgc
tccttcagctcgcggaacggcggcatgccgcattacctgcgtcagacggaggacgtggcg
gagatcctgaaccactgcgccagctccaactggtccgagaggaaagaggggctgctggga
ctccagaacctcctgaagagccagagagtcctcagtcgtgtggagctgaagagactgtgt
gagatcttcaccaggatgtttgcagatcctcacagcaagagagtgttcagcatgttcctc
gagacgttggtggacttcatcacgttacaccgagaggagcttcaggattggctgtttatt
ttgctcacgcagctgctgaagaaaatgggggccgatcttctggggtccgtccaggccaaa
gttcagcgggctctagacgtcaccagggattcgtttccgtacgatcagcagttcaacatc
ctgatgcggtttattgttgatcagacgcagactccaaacctcaaggtgaaggtggccatc
ctgaagtacatcgagtctttggccagacaaatggacccgtcagacttcgtgaactccagc
gagacccggctggccgtctctcggatcatcacgtggaccacagaaccgaagagctcggac
gtcaggaaggtcagtgtgtttctgaagcctcgcggatggggttcggatgagacgttgaag
tttggtttgtcagtgagttgtgatgtgtctcagacgcttcatagctgggcgaacgaggag
gcgtcaggcaggagctcgaccgtggcctccctgccgggggaaagtaacctggaggagaga
tgtaagcaggcggctcagatggttttgatcgctctgtttgagctcaacaccccagagttc
accatgctgttaggcgctctgcccaaaaccttccaggacggagccactaaactcctgcac
caccatctgaagaacaacagtaacgccgccgcagtgtctcaggcgtctcccagcagcccc
gcgggacgcgcccctcccagacaccctgtgacccgcaccagcccgctgtcacccaccaac
tgctcacacggaggactttctcccagccgtttgtggggctggagctcaaaggcttcttct
cctctcattcccccccaccccggccccgccacaccccctctccgggctcatcggcgggcg
tattcgcccagtatgctggagtacgacactgagaacatgaactctgaggagatcttcagc
tctttgagaggcgtaaccgaagccatccagagcttcagtttccgcagtcaggaagaaatc
ctcgagcccatcaaacgtgacggcaagagggaagatacgaccggcgtggcgtcgtcgggt
gtggatcctcgtctgtccacaggtgtgatggagggaggccggacggcgctggacaacaag
acgtccttattaaacacaccgtcctctcgatcgttcagcgggccgtggacacgcgagtac
aacccctacaactacagcgacatcagcgcctacgagaagggagcgttagccgtgtttgac
gatgcggagcagatccgagacggtcgtcaacaggacggcggagaaaacaaaatcatgcat
cccaaaggcttttctgcaggacccggacagcacctggagatggttggcaacctgctgaag
gagctgtccaatcacagcgagcgtgtggaggagaggcgggccgctctgctggagctgctg
aaggtcacgcgtgacgacagtctggccgtgtgggaggagcattttaaaaccatgctgctg
ctgctgctggagacgctgggagataaagatcacaccatccgagcgctggcgctgcgcgtc
ctgaaggagatcatgcgcagtcagccggcgcgcttcaagaactacgcagagctgaccatc
atgaagacgctggaggcccataaagactgtcacaaagaggtcgtgcgggccgcagaagag
acggcctccacgctggccggatcaatccactccgagcagtgcatcaaagttctgtgtccc
atcatccagacggccgactatcccatcaacctcgccgccattaaaatgcagaccaaagtt
atcgagcggattccccaggattccctggttcagcttctgcccgacattatcccaggactg
ctacagggttatgataacacagagagcagcgtacgcaaggccagtgttttttgtttggtg
gccatttattctgtcatcggtgaagatctgaagcctcatctacagcagctgaccggcagc
aagatgaagttactgaatctgtacatcaaacgagctcaaaccaccaacagcaacagcagc
agttcttcagacgtctcgtctcacagctga
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integrated database retrieval system
