Megalobrama amblycephala (Wuchang bream): 125256879
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Entry
125256879 CDS
T08212
Symbol
smarcad1b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1b isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125256879 (smarcad1b)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125256879 (smarcad1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
HHH_3
Pyr_excise
Motif
Other DBs
NCBI-GeneID:
125256879
NCBI-ProteinID:
XP_048029132
LinkDB
All DBs
Position
LG2:complement(35282556..35302141)
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AA seq
959 aa
AA seq
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MRRKKGPASSNHVDPSEPDTIIPETPETKRPSGSSFSTALSDSDIEISGSSMMPIRQVEP
KNKAASSEDEISPSDEEEVTVVKIERRQKHKRTRSTSQALQTQQKGSQMVTNSTHPSLLK
TSGTAASDSVHERRQQQMCGNSQESDSSYRSRKRRASEMDDSEEEGPEPRSKDQERMLRK
LQRKFPHLNKNELRDVLQEHSWLIEDALETLRMFSDLVVESEDDASQISTAAKRTRRVAN
TRQQAQVVQLPSPPQPKPRKPLDRTKTPQRSAKQSAVTKNVYVSSSEECSDSEASMVNVL
LDSDSDQSDETLSKLKSEILSFFQTASADELTLIAGCSLKKAQKITELRPFKKWEDLDDA
MHRGNGLSTELLAGCREVLKEREVVKGLMSKCEEISVKLIQDVTQMMNNGPGSMSQPQIL
TSTFQLKPYQLIGLNWLALLHQNKLSGILADEMGLGKTIQAISFLAYLYQEGNQGPHLIT
VPASTLDNWVRELKLWCPSFKVLVYYGSAEDRKYMRYEILNKIVDYNIIVSTYNLAIGNN
SDRSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLL
NFIMPSMFSSSTSQISKMFSMVEFAYTKSSEEQSSFERDRITHAKLIMKPFILRRVKSEV
LKQLPAKEEQVEFCAMSERQQELYNALFHKLKRSSNGEKRELTNVMMQLRKMSNHPLLHR
HYYTTEKLKAMSKLMLKEPSHRDADPALIKEDMEVLSDFELHHLCQQYSALQEYQLDTDI
LLDSGKLSLLAQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYKRLDGSTPMSDR
IGLIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQT
KTVKVIKLISKDSIEDAMLRIGERKLKLEQDMTATATEEDEDDTLPDDMTSLLKASLGL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaaagaaaggacctgcatcctcaaatcatgtggatccctcggagccagacact
atcattccagagactcccgaaaccaaacgtccatcaggatcatctttctccactgccctt
tctgactctgacattgagatatcaggcagttccatgatgccaattaggcaagtagagcct
aagaacaaagcggcatcatctgaggatgagatatcaccatctgacgaggaggaagtaact
gtggtgaagattgagagaaggcagaagcacaaaagaacaagatctacctcacaagctcta
caaacacaacagaaagggtcacaaatggtgaccaatagcacgcacccctcgctcctgaag
acgtctgggacagcagcgtctgattcggtccatgagaggagacagcagcagatgtgtggc
aattcccaggagagcgacagctcctatcgtagcagaaagaggcgggcttctgagatggat
gattcagaggaagaggggcctgagccaagatctaaagatcaggaacgtatgctgagaaaa
cttcagaggaagttccctcatctgaacaagaatgaactcagggatgtgcttcaggaacac
agctggcttattgaagatgccttggaaacactacgaatgttctctgatcttgtggtcgag
tctgaggatgatgcctctcaaatttccactgctgccaaacgcaccagacgggtcgcaaat
acccgccaacaagctcaggttgtccaacttcccagcccaccccaaccgaaaccacgcaaa
cctcttgacaggaccaaaacacctcagaggagtgcaaagcagtcggcagtgacaaaaaac
gtatacgtgagctcatcggaggagtgtagtgactctgaagcctctatggtgaacgtatta
ctggactctgactctgaccaatcagatgagactctatccaaactcaaatctgagatcctc
agcttctttcagaccgcttctgcagatgagctcacactcattgcaggatgctctttgaag
aaggctcagaaaatcaccgagctgagaccctttaaaaagtgggaggacctggatgatgcc
atgcacagaggaaatggtctttccactgagctgctggcaggatgtcgggaggttctgaag
gaaagggaagttgttaaaggtctcatgagcaaatgtgaagagatatcggtaaaactgatc
caagacgtgacccaaatgatgaacaatggcccgggctctatgagccaaccccagatcctc
actagcacattccagttgaaaccgtaccagctgattggactgaactggctggctttatta
catcagaacaaacttagtggaatcctggcagatgagatgggtctggggaagaccatccag
gccatctcgttcctggcctacctctatcaggaagggaaccaagggcctcatctgatcact
gttcctgcttctacacttgataattgggttcgggaactgaaactttggtgccccagtttc
aaagtgctggtatattatgggtctgctgaggatcgcaagtatatgcgctatgagattctg
aataaaatagtggattacaacatcattgtctccacttacaacctggctattggaaataac
agtgaccgcagcctgttctgcaagctcaagctggagtatgccgtgttcgacgaaggccat
ttactgaagaacatgaactcgctgcgctaccgacacctcatggccatcaacgccaaatat
cgtctgctgctcactggaaccccactgcaaaacaacctacttgagctcatgtccctgctc
aacttcatcatgcccagcatgttctccagcagcacctcacagatctccaaaatgttctcc
atggtagaatttgcatacaccaaatcttcagaggagcagagcagttttgagagggacagg
atcacccacgccaaactcatcatgaaacccttcatcctcagacgtgtgaagagcgaggtc
ctgaagcagctgcctgccaaagaggagcaggttgaattttgtgccatgtctgagaggcag
caggaactctacaatgctcttttccacaaactgaagcgatccagtaatggggaaaaacgt
gagctgaccaatgtgatgatgcagctgagaaagatgtccaaccatccgcttcttcaccgg
cactattataccacagaaaaactcaaagccatgagcaaactcatgctcaaggagccgagc
caccgtgatgcagatcccgctctcatcaaagaggacatggaggtgctctcagactttgag
ttacaccacctctgtcagcagtattctgctctgcaggaataccaactcgacacagacata
ctgctggactcgggaaagctcagcctcctcgcacagctgctgaactccctgaaggagaag
ggtgatcgagtggtgctgtttagccagttcacaatgatgcttgacattttggaggtgttc
ctgagacaccataagcacagatacaaacgactggacggttcaacccccatgagtgacaga
attgggctgattgaccagttcaacacagaccaggatatatttgtgttcctgctgtccacc
agagccggagggctgggcattaacctgacttcagccaatgtggtcattcttcacgatatc
gactgcaacccttacaatgacaaacaggcagagggccgctgccaccgggtgggacagacc
aagacggtgaaggtgatcaagctgataagcaaggactccatagaggacgccatgcttcga
attggagaaagaaaactcaaactagagcaggacatgaccgcaactgcaactgaggaggat
gaagatgacacattacctgatgatatgacctcgctgctcaaagcttctcttggactctaa
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