Megalobrama amblycephala (Wuchang bream): 125256972
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Entry
125256972 CDS
T08212
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mamb03041
]
125256972 (rbm39a)
Spliceosome [BR:
mamb03041
]
Common components
Common spliceosomal components
General mRNP proteins
125256972 (rbm39a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_5
PRP38_assoc
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
125256972
NCBI-ProteinID:
XP_048029297
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All DBs
Position
LG21:17754918..17760624
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AA seq
552 aa
AA seq
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MADDLDIEAMLEAPYKKDDNKSISTNGHEERSKKKKKSKSRSRSRERKRSRSRDRKKSHD
HRRSRSRERKRSRSRERRRSRSRSRERGGRYRAPFAPDECENVFQRTITKYAEEFSCHPD
LYLFSGLKFNGGPRGKTGPPPVIKLSRRRSRSRSPFKKDKSPIRQPIDNLTPEERDARTV
FCMQLAARIRPRDLEEFFSAVGKVRDVRIISDRNSRRSKGIAYIEFVDATSVPLAIGLSG
QRLLGVPIIVQASQAEKNRAAALANNLQKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGR
IDSIQLMMDSETGRSKGYGFITFADAECAKKALEQLNGFELAGRPMKVGHVTERTDASTA
SSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSMVAMAAATAAM
NPGLSFNINVPTNQALNLPSQPIATHCFQLSNMFNPNSENDPGWEIEIQDDVIEECNKHG
GVIHIYVDKKSAEGNVYVKCPTIPAAMAAVSALHGRWFGGKMITAAYVPLPTYHNLFPES
VQATQLLMPSRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacatcgaagcaatgctagaggctccatataaaaaggatgacaac
aagtccataagtaccaatgggcacgaggagcggagcaagaagaaaaagaagagcaagagt
cgcagcaggagtcgggagaggaaaagaagcaggagtcgcgatcgcaagaagagtcatgac
cacaggaggagccgcagcagagagcggaagcgcagccgcagcagggagagacgccgcagc
cgttccaggagcagggagcgtggcggtcgctacagagctccatttgctcctgatgagtgt
gaaaatgtcttccagagaacaattactaagtatgcagaggagtttagctgccatcccgat
ttatatctgttttctggcctgaaatttaacggtggtcccagggggaagactggcccacca
cctgtcatcaaactaagccgtagaaggtctagaagccgcagtcctttcaagaaagacaaa
agccctataagacagcctattgataatctcaccccagaggaaagggatgcgcgcacagtg
ttctgcatgcagctggcagctagaatccgaccacgagacctggaggaattcttttctgca
gtgggaaaagtgcgagatgtgcgaatcatctctgacagaaactccagaagatccaaagga
attgcttacattgagtttgtagatgccacctctgtacctttggcaataggcctatccggt
caaagacttctcggagtaccgatcattgtccaggcttcacaggctgagaaaaacagagca
gctgcattggccaacaacttacagaagggcagttcaggacctatgagactgtatgttggc
tcattacacttcaacatcacagaagacatgctcagaggcatctttgaaccatttggaagg
attgatagtattcaactgatgatggacagtgaaaccggacgatctaaaggatatggcttt
atcacgtttgctgatgccgaatgtgctaagaaggctctggaacagcttaatggctttgag
ttggctggcagaccgatgaaagtgggacatgtgacggaacgcactgatgcctccaccgcc
agctccttcctggacaatgatgagctggagaggaccggtattgatctgggaactacggga
aggcttcaacttatggccagactggctgaaggtactggtctgcagatcccacccgctgca
caacaagcccttcagatgagtggctccatggtagccatggctgcagctactgctgctatg
aaccctggattgagttttaacatcaacgtgcccacaaaccaagctttgaatctaccatcg
caaccaattgcaacacactgtttccagctgtctaacatgttcaatccaaactcagaaaat
gatcctggttgggaaatcgaaattcaggatgatgtcattgaagagtgcaacaaacacggc
ggagtcatacatatatacgtggacaagaaatccgctgaaggtaatgtctatgtaaagtgt
cccaccattcctgctgccatggctgcggtcagtgcgttacatggacgctggtttggaggt
aaaatgatcacagcagcttatgtccctcttcctacataccacaaccttttcccagagtca
gtgcaggctacacagcttcttatgcccagtcgccggtga
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