KEGG   Megalobrama amblycephala (Wuchang bream): 125257300
Entry
125257300         CDS       T08212                                 
Symbol
itga1
Name
(RefSeq) integrin alpha-1
  KO
K06480  integrin alpha 1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04510  Focal adhesion
mamb04512  ECM-receptor interaction
mamb04810  Regulation of actin cytoskeleton
mamb04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    125257300 (itga1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    125257300 (itga1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    125257300 (itga1)
   04810 Regulation of actin cytoskeleton
    125257300 (itga1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mamb04147]
    125257300 (itga1)
   04515 Cell adhesion molecules [BR:mamb04515]
    125257300 (itga1)
   04090 CD molecules [BR:mamb04090]
    125257300 (itga1)
Exosome [BR:mamb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   125257300 (itga1)
Cell adhesion molecules [BR:mamb04515]
 Integrins
  Integrin alpha subunits
   125257300 (itga1)
CD molecules [BR:mamb04090]
 Proteins
  125257300 (itga1)
SSDB
Motif
Pfam: VWA Integrin_A_Ig_2 FG-GAP Integrin_A_Ig_3 Integrin_A_Ig_1 VWA_2 FG-GAP_3 vWA_SIBA-E MFS_Mycoplasma LYRIC
Other DBs
NCBI-GeneID: 125257300
NCBI-ProteinID: XP_048029688
LinkDB
Position
LG2:36695670..36752702
AA seq 1182 aa
MLSGGYHFTLAALLVLLPWLSCFNVDEKNGMSFSGPVEDMFGYTVQQFENSEGKWVLIGS
PLTGQPAHRTGDVYRCPVGQKKNTGCEKFNLSENTTIPNINEVKENMTMGTTLVVNPDGS
GFLACGPQYGYMCGKQQYITGICSNVSSSFKVLKPIAPSVRECKQDMDIVIVLDGSNSIY
PWDPITDFLKKFLQNIEIGPARVGIVSYGDDVGHVFNLSQFSNTEELVREAGKIPQKTGH
KTMTALGIDIARKEAFTVERGARPGVKKVMVIVTDGESHDRYDLKRVIDQCEKDGIERFA
IAVLGDYNRQNKTSEEVKKFVDEIESIASDRKSDHFFNVSDELALVTIVDALGSKIFALE
ATSGNHTSSFEMEMSQSGFSAHMSKAGIMLGAVGAYDWNGTVLMQAGNEFVIPKKNSFHN
LEVQRYEGMAGYIGYDVQSAYTPNGVLYITGAPRFNHSGRVMVYRFDGENVTISQTLKGE
QIGSYFGSVLQTHDIDRDSYTDILLVGAPMYMGPERDEQGQVYVYKLNKDGLFEHEMTLK
PVNQTCCTANSRSNCKSISKNEPCGARFGTAIAAVPDLNLDGFNDIVIGSPLENDHRGAV
YIYHGSQKSIKEKYVQRIAAGGDGVSMKFFGQSIHGIMDLNDDGIIDVTIGGIGGAALYW
SRDVAELLAEMTFDPSKINLQQTCQVHGRTTVCVKTKVCFKYRIKSDKDTNTGTVIKYSL
TLDSLRAIARGRFNETEDRTLQKNVSIVDKLCREHIFYTSDKLDFRDPIMVTLEFGLADE
DTGPVLDGELPTSLNKTIALVDCGSDDKCVANLDLKAKANIASLLIKNNQEKFFVEIDIH
NSGDNAYNTRVTLSHTENINYVKVEPKEKDCETNNTRIVCAVGYPFLKNNKMESFKIQFE
PNPSHIRKDIVINVTATTDSEEVDSALNFVSIIIPVKHEANLRFFLNKYMKEDHIILKEK
ATIPSVFNHTSVIGDEVKISYTIERDLEMPSPPLQLTIKFPYQTSAKNFLLYLTDITHTQ
NISCDARQWINPLRIKPDNPHSVNPKKETLSIYLLSCKEDQNPCVSFSCSIPPGDFNQIN
TTFRVWRPTFIKGEFSSIHMIVEAKLENKDTDLFVLNENVKTREVKIQVTKDIRSGIPYW
IIILSILIGLLILALVIFALWKAGFFKRKSVEDMKEDMKESD
NT seq 3549 nt   +upstreamnt  +downstreamnt
atgctttctggaggctatcatttcacactagcggcgcttctggttctgctgccatggttg
tcatgtttcaatgtggatgagaagaacgggatgtcattcagtggaccagtggaggacatg
ttcggatacactgtccaacagtttgagaacagtgaaggaaagtgggttctgatcggttct
cctcttactggacagccggctcaccggaccggagatgtctacaggtgccctgtgggacaa
aaaaaaaacactggatgtgaaaaattcaatttgtcagaaaacacaacaattccaaacata
aatgaagtcaaggaaaacatgactatggggacgacgctggtggttaacccagacggcagt
gggtttctggcctgtggtcctcagtatggctacatgtgtggaaaacagcagtacatcact
gggatctgctctaacgtcagttcctccttcaaagtcctcaagcccattgctccatctgta
cgagagtgcaagcaagatatggacattgtcatagtgttggacggttccaacagcatctac
ccctgggatcccatcactgactttctgaaaaaatttctccagaatattgaaatcggacca
gcccgggtgggcattgtgtcgtatggtgatgatgtcggtcatgtcttcaatctcagccag
ttcagtaacacagaagaacttgttcgggaagccggcaagatacctcaaaagactggccac
aaaaccatgacagctctcggcattgatatagcaaggaaagaggcctttacagtggagcga
ggagcaagaccaggagtcaaaaaagtcatggtgattgtcacagatggggagtcacatgac
cgctacgatttgaaacgtgtcattgatcagtgtgaaaaagatggtattgagaggtttgcc
attgctgtccttggcgactataatcggcagaataaaaccagtgaagaggtgaagaagttt
gttgatgaaattgaatccattgccagcgaccgcaaaagcgatcatttcttcaatgtgtcg
gatgaacttgctttagtgaccatcgttgatgccttaggaagcaagatctttgccttagag
gccacatctgggaaccacacctcctcctttgagatggaaatgtctcagtcgggattcagc
gctcacatgtctaaagcaggtatcatgctgggagccgtgggtgcttacgactggaatggg
actgtattgatgcaggctgggaatgagtttgtcattccaaaaaaaaacagcttccacaac
cttgaggtgcagagatacgaaggcatggcaggatacataggttatgatgtacagtcagca
tacacacccaatggagtgctgtacatcacaggagcaccacggtttaaccacagcggacgt
gtcatggtgtaccgcttcgatggagaaaatgtcaccatatcacagacgttgaaaggagag
cagattggctcctatttcggcagcgtcctccagacgcatgacatcgaccgtgacagttac
actgacatccttctggttggcgctcccatgtatatgggtccagagagagacgaacaaggt
caagtctacgtctacaaactcaataaggatgggctgtttgaacatgagatgacgctgaag
ccggtcaatcagacctgttgtacggctaactctcggagcaactgtaaaagcatcagtaag
aacgagccctgcggcgcacgcttcggcactgcaatcgctgctgttcctgacctcaacctg
gatggcttcaatgacatagtgatcggatcacctttggagaacgaccacagaggggcggtg
tatatttaccacggttctcagaaatcaataaaggagaagtatgtacagcgtattgctgct
ggaggagatggagtgagcatgaagttctttggccaatcaattcacggcatcatggatttg
aatgatgatggcatcattgacgtcactatcggaggaataggaggggccgcactgtattgg
tctcgggatgttgcagagcttcttgccgagatgaccttcgacccaagcaagatcaatctg
cagcagacctgtcaggtccatgggaggaccacagtatgtgtgaagaccaaagtgtgtttc
aaatatcgaatcaagtctgacaaagacacaaacacaggaactgtcatcaagtacagttta
actctggactcactgagagcgattgccagaggacggtttaacgaaacagaggacaggaca
ttgcaaaagaacgtgtcaatcgttgacaagctttgcagagagcacatcttctacacgtcg
gataaactggatttcagagaccccattatggtcacgctggaattcggtttagcagatgaa
gacacgggtccagtcctagacggggaattaccgacgtcactcaataagaccattgcatta
gtggactgcgggagtgacgacaagtgtgttgctaatctagaccttaaggccaaagcaaac
atcgcaagtcttctcataaaaaacaaccaggagaagttctttgtcgagatagacatccac
aacagtggagacaatgcctacaataccagggttacactgagccacactgaaaatatcaac
tatgtgaaagttgagcctaaagagaaggactgtgaaactaataataccagaatagtatgt
gcagttggatatcctttcctcaaaaataataaaatggaaagcttcaaaatccaatttgag
cccaatccctcccatattcgtaaggacattgtgattaatgttactgcaacaactgatagt
gaggaggttgattcagcactgaactttgtgagcatcatcatccctgtgaagcatgaagcc
aacctgcgattctttttaaacaagtatatgaaggaggaccacatcatattgaaagagaag
gcgacaattcccagtgttttcaaccacactagtgtgatcggcgacgaggtgaaaatcagc
tacacgattgagagagatcttgaaatgccgagtcctccactgcagctcacgataaagttc
ccatatcaaacgtctgcaaaaaacttcctgctgtaccttacagatatcacccatacacaa
aacatcagctgtgatgccagacaatggattaaccctttacgcatcaagcctgacaaccct
cattcagtgaatcctaaaaaagagaccttgagcatctatcttttgagttgtaaagaagat
caaaatccctgtgtgtcatttagctgctccatccctcccggagacttcaaccagatcaac
accactttcagagtgtggcgacccaccttcataaaaggagaattttccagcattcacatg
attgtcgaagccaaactggagaacaaggacacggacctgttcgtgttgaatgaaaacgtc
aagaccagagaggtgaagattcaagtcaccaaagacatacgaagtggaatcccatattgg
attattatcctcagtatcctcatcggacttttaatactggcacttgttatctttgcttta
tggaaggctggattcttcaagagaaaatccgttgaagatatgaaggaagatatgaaggaa
tctgattga

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