Megalobrama amblycephala (Wuchang bream): 125257561
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Entry
125257561 CDS
T08212
Symbol
itgb1a
Name
(RefSeq) integrin beta-1a isoform X1
KO
K05719
integrin beta 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03271
Virion - Rotavirus
mamb04145
Phagosome
mamb04510
Focal adhesion
mamb04512
ECM-receptor interaction
mamb04514
Cell adhesion molecules
mamb04530
Tight junction
mamb04810
Regulation of actin cytoskeleton
mamb04820
Cytoskeleton in muscle cells
mamb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
125257561 (itgb1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125257561 (itgb1a)
04514 Cell adhesion molecules
125257561 (itgb1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125257561 (itgb1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125257561 (itgb1a)
04530 Tight junction
125257561 (itgb1a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125257561 (itgb1a)
04810 Regulation of actin cytoskeleton
125257561 (itgb1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
125257561 (itgb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125257561 (itgb1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125257561 (itgb1a)
04515 Cell adhesion molecules [BR:
mamb04515
]
125257561 (itgb1a)
04090 CD molecules [BR:
mamb04090
]
125257561 (itgb1a)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
125257561 (itgb1a)
Exosome [BR:
mamb04147
]
Exosomal proteins
Proteins found in most exosomes
125257561 (itgb1a)
Cell adhesion molecules [BR:
mamb04515
]
Integrins
Integrin beta subunits
125257561 (itgb1a)
CD molecules [BR:
mamb04090
]
Proteins
125257561 (itgb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
RBP_receptor
Motif
Other DBs
NCBI-GeneID:
125257561
NCBI-ProteinID:
XP_048029948
LinkDB
All DBs
Position
LG22:22279455..22330545
Genome browser
AA seq
802 aa
AA seq
DB search
MDLKLLFISTLLGIICCSRAQQEGNECIKANALSCGECIQVGAKCGWCTDTDFLKQGEPT
SARCDELESLKKRGCSATKIENPHGSQRTLKNKPVTNRKKGADKLRPEDITQIQPQKLSL
NLRSGEPQNIKLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKNLGTSLMKEMSKITSDFR
IGFGSFVEKTVMPYISTTPAKLLNPCTGDQNCTSPFSYKNVLKLTSNGQQFNSLVGQQQI
SGNLDSPEGGFDAIMQVAVCGDHIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKC
HLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLS
ANSSNVINLIVDAYNSLSSEVILENSKLPEGVTITYQSHCKNGIVNEGENGRRCSNISIG
DEVSFNINITAQGCPKQGKSETIKIKPLGFTEEVEIVLNFICECECHKHGIKNSDLCHNG
NGTFECGACRCNKGRVGRQCECRKDEVSTEDLDKNCRKDNGTDICSNNGECVCGTCECKK
RENPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRVCICDANYTGSACDCSLDTSTCL
ASNKQICNGRGNCECGTCRCTDPKFQGPTCEICPTCPGVCTEHKECVQCRAFGTGEKKDT
CERDCSYFNLIKVKDRDKLPQPVQAFPLMHCKERDANDCWFYYTYAVNNNTEKEVHVVET
LECPAGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTTEN
PIYKSPINKFSNPNYGRKAVAL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaagctacttttcatatcaacattattagggatcatttgttgcagccgtgca
cagcaagagggcaacgagtgcatcaaagccaatgctttatcctgtggcgagtgcatacaa
gtgggggctaaatgtggatggtgcactgataccgattttctaaaacagggagaaccgaca
tcagcgcgctgcgatgagctcgagtcactcaagaaaagaggctgttcggcaaccaagatc
gaaaaccctcacgggagccaaaggaccctcaagaacaaaccagtgaccaaccgcaagaaa
ggcgcagataaacttcgacccgaggacataacacagatccagcctcagaaactcagcctc
aaccttagatctggggaacctcaaaatatcaagctaaagttcaagagggctgaagactat
cccatagacctgtactacctgatggacctgtcctactccatgaaggatgacttggagaat
gtcaagaatctagggactagtttgatgaaggaaatgtccaagatcacctcagatttcagg
ataggttttggctcttttgtggagaagacagttatgccgtatatcagcacaactccagcc
aagctcctgaacccctgcacaggggaccaaaactgcaccagccccttcagctacaaaaat
gtgctgaaactcaccagcaatgggcagcagttcaacagtctggtggggcaacagcagata
tctggcaacctcgactcgcctgagggaggatttgatgctatcatgcaggttgctgtctgt
ggagaccacattggctggagaaacgtcacccgtttgttggtgttctctactgacgcaggt
tttcattttgccggagatggcaaactcggtggaatcgtgcttcccaatgatgggaaatgc
cacttagaaaacaacatgtacaccatgagccattattatgattacccctccatcgcccac
ttggttcaaaaactgagcgaaaataacatccagaccatctttgcagttacagaggagttt
cagcctgtttacaaagaacttaaaaatctgattccaaagtctgcagtgggaacgctctca
gcaaactccagcaatgttatcaatcttattgttgatgcctacaactctctttcctccgag
gtgatccttgagaacagtaagcttcctgagggagtgactatcacctatcaatcacactgt
aaaaatggaattgtgaatgagggagaaaatgggcgcaggtgctctaacatctcaatcgga
gacgaggtgtcgttcaacattaatatcacagctcaaggctgccccaagcaagggaaatcg
gaaaccattaagatcaagcccttgggctttactgaggaggtcgagatcgtactcaacttt
atttgcgagtgtgaatgtcacaaacacggcatcaagaacagtgacttgtgccataacggc
aatggaacgtttgagtgcggagcctgcaggtgcaataagggacgtgttggcaggcagtgt
gaatgccggaaagatgaggtgtccaccgaggacctggacaagaactgccgcaaggacaac
ggcacagacatctgcagcaataacggcgagtgcgtgtgtggcacttgtgagtgcaagaag
agggaaaatcctgaagaacgctacagcggaaaattctgcgagtgtgacaacttcaactgc
gaccgctccaataataaactctgtggaggacacggccgctgtgaatgtagggtgtgcatc
tgtgacgctaactacaccggaagcgcgtgcgactgctctctggacacctccacctgctta
gcctccaacaagcagatctgtaacggcagagggaattgcgagtgcgggacctgcaggtgc
accgaccccaagttccaggggcccacctgtgagatctgccccacctgccctggagtctgt
actgagcacaaggagtgtgtgcagtgccgggcgtttggcacaggagagaagaaagacacg
tgcgaaagagactgtagctactttaacctcatcaaggtgaaggacagagataaactccct
cagccggtgcaggccttccctctcatgcactgtaaggagagagacgccaacgactgctgg
ttctactacacttacgccgtcaacaacaacacagagaaggaggtccatgtggtggagact
ttagagtgtccggcaggtcctgacatcattcccatcgtggcgggtgtggtcgcaggcatc
gttctgattggtctagccctgctgctgatctggaagctgctcatgatcattcacgaccgc
cgcgagttcgccaagtttgagaaggagaagatgaacgccaagtgggacacgacagagaat
ccaatttacaagagccctattaataaattcagcaacccaaactatggacgtaaagctgtg
gctctataa
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