Megalobrama amblycephala (Wuchang bream): 125257571
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Entry
125257571 CDS
T08212
Symbol
rttn
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mamb03037
]
125257571 (rttn)
Cilium and associated proteins [BR:
mamb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125257571 (rttn)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
TPR_IPO5
TPR_Trm732_C
DUF383
Motif
Other DBs
NCBI-GeneID:
125257571
NCBI-ProteinID:
XP_048029971
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All DBs
Position
LG22:complement(21728964..21804518)
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AA seq
2247 aa
AA seq
DB search
MELSSLIKKIGHSLVEIRVRALKNIRSKLDHDLIAVPDLVQEKMLFVFLLEWFNFPEVPM
QEEVLELISMLSKHPTGAQMLREVGAVEFLTQLSPNVDLRLRTIVDGIFDQLFHLPEALP
SCPPTTSYEPHSVPSLQTAAFVFSEEDSSARGYFQCSKPKQTDAPTPRVSFSTSVRCLKF
SVFPWLSLNTTDRHILSSNESSLRSDDHNLVRTTCELLRDVIMQDFPAEIFLQRPSTVQS
LLSLLGLNVDGDVSYLMLQALACLEQLCRNLRSRLRFYRDPSFCSAKQDPVSQNSSISYP
HDVRGTQRSGVSSPEEGSPRPSVVGRPVQRVRGDGQDGDAASSSGSSSQRGAPPRPAQQS
PHPQPHPELPPEMEAEDSLELQLQQWSLARFAVAAVEHALPLIRTESLKVFQRVLELLAE
AQGLLGDSVAPEVWDEHSLTATELREKLQACIETLGDVMCYHHGMTSSEQPESSLIHHRM
VFTGTAIFTIRLLQTLLPVEKAGDNLPESTVAAIFLLCLDASFSVAYPLIHESAVAYLEQ
ACFERYSLYRRVSRVSHCMEATCTFLKDAQAEGDKNWHELLELADQGIDAFPCHQHLPMV
KECVQICSYLWKFAQASPLLQSESQKIFLKLLSHPLSPVKVETYSSTLSILKECLGVQNV
AKPASSICSGVHFLLHSRVLYEISVFGLQDQAREVSAAAKDILLYLLKGRLMMTAASWSR
FNEALYPVIPILQSYASTEDALGNCILLLSEASAEKEDEVCSPPTRLRMALRLLFTKHHA
VRNKAVQHLLPHLTSAEGASKSRPTLDSSTLSCLPNLYVLNKSVDIKLSNSDKSYVKVES
VNKLYSILKSETVDLVLRRSAADQLTIVLQDSSMHVVLKALGLSDKLISFITECVNNNVA
SMDCMLEPSICMLRKLVFADPSLRHSLAQQTSLLIKLLRASLLIKENQGDVSEAAALMCI
LLFDEIAQMDVWTDKVGSDTGLSSFSLPAAIIRRYNLPFQAPSHHAVSPYCSVLPPYSDL
LSLKPACEALQVTWNTAWHSGIDGLLEHLRGFRSDVPEFHGDLVLSESQVVVLRISNISS
GLQDCIHGVRDASSHSTVTFAMTRMHLYLFADRLALKSTAQSSKNILQTLSWHNAVERFL
MVRPACCQDERLLVDIVSFLNTFFKQNQSELDHQDLKWLLELLLNQESHTLLNLLLSAEP
QTHTQIQSQGEADKLQAHLSHRLQRELTGLFNTLLLRMTHTSDRVCEALSGPFASELSLR
LLQCLRLSDAPCFYGLPSLERTLRTMAHVTTLPGWSTHTPSMEPNTLCLKYLSGLLEVIS
SFYVDLGGNSMSFMGKGVTKNAVICLLHLSHEMMKETKNEDWISLWSLGREQSSDEQSAA
QLGLAWLIPLWVDRDPEVRCASLAVGAALSSLERGCVALSASCQNISGGLWATVLNILLE
RQECSMVRREAAFILQNLLVMPMPANAEEAKECAWQSPCVHDEDSGLCLVGLPALQALLY
HCQFFESVGQMVKSCYMGRHAFTLSPPPPPVNVTQETDLNDSLKHWREMLAPLNQTQGSG
SMSTSSTLLPSVSSSGTHSPVPTSGVTGIQDTPVNRLTAQGQSDTDSSDSALTQESHSGG
RAEPVAIVTPHLLLAVCGLLDNLLVVLPEFSLSALKHNQILQGLASVVDAATISQCVSEL
RTPLLPAAMEDARNQVLSSLYYVQSLCKLLQSAAMHSDDVLFHRELFKPLLNNLISILTL
SVADLDAQAQGAVLNTWADVLMLLATLLRRNQAAVGPSVGVALGKHWQCFSDTIRVCLNQ
SGTESSLYTSTLHFLCVLFTEEAKRRSGGHTEDLTSKGPSSSLTAVISSEPGEVMCELLL
EQYEKIPFQDPLKKVTAKAFMSLLACSSSAQSYACKAGVIDSCVERMKHIYAELHLESVK
TGKSTHRRKQVENSMRELKMILEILRNCLYQHNECKAVATELRLAAVLLALWPWFLLDDL
TMTAALELLCVYTANYTAACSALCSSSSSSCSSGSVQAVLPKTAVTNSLMHGVMKLASQV
APDNSSIHSLAFSLLANLAISKDCKGVLLKSNFLQQFLSLPMPKAGGRSGVPTADPLSLW
LRLLLNVSFGDDGQQMILRLRGALELLVELAQSKHSSTKPTVLLILHNICFCSANKPKVL
ANDKAVETLVSCLSSSSSDIRTIGASALWALLHNNQKAKATLKCPSIRLKVEEAYVSARK
DEEHRSDKPMNVYLLKCLRNLTHIFNS
NT seq
6744 nt
NT seq
+upstream
nt +downstream
nt
atggagttatcatcactcataaagaagataggacactccttagtggaaatcagagttcgg
gctcttaaaaatatcagaagcaaactggatcatgatctcatcgctgttcctgatctggtc
caggaaaagatgttgtttgttttccttctggaatggtttaattttccggaggttccaatg
caggaggaagttctggagttgatcagcatgctgtccaagcacccaaccggagctcaaatg
ctacgggaggtaggggctgtcgaattcctaacacagctctcgcctaatgtggatcttcgc
ctccgaacaatcgtagacggcatcttcgatcagctcttccacctcccagaggccctgcct
agttgtccacccaccacctcctacgagccacactctgttccctcgctgcagacagctgct
tttgtgttctcagaagaggactcgtcggctaggggatatttccagtgcagtaaacccaag
cagacagatgctcccacccccagagtatcattcagtacttctgttagatgcttgaagttc
tcagtttttccatggctgtctttgaacacaacagatcgacatatattgtcatcaaatgaa
agttcccttagaagcgacgaccacaacttagtacgaaccacctgtgagctgcttcgtgac
gtcattatgcaagacttccccgctgaaatattcctgcaaaggccaagtacagttcaaagt
ctgctgtcacttctcggcctgaatgttgatggtgatgtcagctacctgatgttgcaggca
ttggcctgtctggaacagctttgtaggaacttgaggagccgcctacgtttctacagagat
ccaagcttctgctcagccaagcaagaccctgtttctcagaactcctctatctcctaccct
catgacgtaaggggtacccagcggtctggggtttcttccccagaggaaggttcccccaga
ccctctgtggtgggccgacccgttcagcgggtacgcggggatggccaggacggagatgct
gcttcttctagcggtagcagcagtcagagaggggctccccccaggccagcccagcagtct
ccccatccacagccccacccggagctccccccggagatggaagcagaagactcactggag
ctgcagctgcagcagtggagcctggctagattcgccgtggcggccgtggagcacgcgctc
cctctcatcaggacagagagcctgaaggttttccaacgggttctagagctgctggcagag
gcgcaggggctgctgggagacagcgtagcccccgaggtgtgggacgagcacagcctgact
gcgacagagctgagggagaaattacaggcatgtatagagacgttgggagacgttatgtgc
taccaccatggcatgacttcctctgaacagccagaatcatctctgatccaccaccgaatg
gtcttcacgggcactgccattttcacaatacgtctcctgcaaaccttgttacctgtggag
aaggctggagataaccttccggaaagtacagtggctgccattttcctcttgtgtcttgat
gcatccttcagtgtggcgtaccccctcatccatgagtcagccgtggcgtacctagagcag
gcttgctttgaaagatacagcctgtatcgtagagtatcccgtgtttctcactgcatggag
gctacatgcacctttttaaaggatgcacaggctgagggcgataagaattggcatgaactt
ttggagctcgctgaccaaggaatagatgcttttccatgccatcagcacctaccgatggtg
aaggaatgcgtccagatttgctcctacctgtggaaatttgcacaagcaagcccgctcctg
cagtctgagagtcagaagatatttctgaagcttttgtctcaccctctgtccccggtgaag
gtggaaacctactccagcactctgagcattttgaaggaatgtttgggagttcagaatgtg
gccaaacctgcctcatccatctgcagcggagtgcatttcttgcttcactcccgtgtcctg
tatgagatcagtgtgtttggccttcaagaccaagcaagagaggtgagcgctgctgccaag
gatattctactctatctgctgaagggacgattgatgatgacagctgcaagttggagcaga
tttaatgaggcactttacccggtcattcctatattacagagttacgccagtaccgaggac
gccctgggaaactgtatcctgctgctaagtgaagcatctgccgagaaggaagatgaggtg
tgttcaccgcctactagactacggatggccctccggcttctgttcaccaagcatcacgct
gtgcggaataaagcagtccaacatctgctaccacacctgaccagcgctgagggtgccagc
aaatccagaccaaccctggacagctccacattgtcatgtttaccaaatctctacgttctc
aataaaagtgtggacataaagttgagcaattcagacaagtcatatgtgaaggtggagtct
gtaaataagttgtacagtattcttaagtcggaaacggtagatctagttttgcggcggtct
gcagctgatcagctgactattgttctgcaagattcatcaatgcatgtggtgctgaaggcc
ttgggcttatcagacaagctcatatctttcatcacggagtgtgtcaacaacaatgtggcg
agcatggattgcatgttggagcccagcatatgcatgctgaggaagctggtgtttgcggac
ccctccctgcgtcacagtctggctcagcagacgtctcttctcatcaagctgctcagagct
tctttgttgataaaggagaaccagggtgatgtgagcgaggctgccgcattgatgtgcatt
ctgctgtttgatgaaatagcacaaatggatgtttggactgacaaagttggctcagacaca
ggcctgtcttccttctcactgcctgctgccattatacggaggtataatcttccatttcaa
gctccttcacaccatgccgtgagtccctactgttcagttctccctccatattcagatctg
ctgagtctgaagcctgcctgtgaagcactgcaggtcacctggaacacagcatggcattct
gggattgatggactgctagagcatttgaggggttttaggagtgatgtacctgagtttcat
ggtgatctggtgctgtccgaatctcaggtggtggtgttacgaataagcaatataagttcc
gggttacaggactgcattcatggggtccgtgatgcaagctcccacagcactgtgaccttt
gccatgactagaatgcacctgtaccttttcgctgaccgccttgcactcaaatccactgcc
caaagcagcaagaacattctgcaaaccctgagctggcacaatgctgtagagagatttcta
atggtacgtccagcttgctgtcaagatgagaggctcttggtggacattgtctcattcctc
aacaccttcttcaagcagaatcaatctgaattggaccaccaggacctaaaatggcttcta
gaattactcctaaaccaggagtcacacaccctgctgaacttgttgctgagtgctgaacca
cagacccacacacagatccagtcacagggggaagcggacaagcttcaggcccaccttagt
caccggctacagagagaacttacaggcctcttcaacactctgctgcttcgaatgacacac
acttctgacagggtgtgtgaggctctgtctggaccgtttgcctctgagctgtctctacgc
ctgctgcagtgcctacgtttgtccgatgctccatgcttttacggcctgccatctcttgag
cgcacgctcaggaccatggcccatgtgaccaccctgcccggctggagcacacacacaccc
agcatggagccaaacacactctgcctcaagtacctcagtggcctcttggaagtcatctct
tcgttctatgtagatttgggaggaaactcaatgtccttcatgggcaaaggagtgacaaaa
aatgcagttatctgcctgcttcacctgtcacatgagatgatgaaggaaaccaaaaatgag
gactggatatccttgtggtctctggggcgtgagcaaagttctgatgagcagagtgccgcc
cagcttggcttggcctggctaattcccctctgggtggacagagaccctgaggtccgctgt
gccagcctggctgtgggtgcggctctgagttcactggagagagggtgtgtggcgctgtca
gcgagttgccagaacatctcaggcggcttgtgggccacggtactcaacatcctgctggag
agacaggagtgcagtatggtacggcgagaggcagcgtttattttgcaaaacctccttgtg
atgccaatgcctgctaatgcagaagaggccaaagagtgtgcctggcagagcccctgcgtg
catgatgaggattctggcctgtgtctggtcgggcttcctgccctgcaggctctgttgtac
cactgccagttttttgagagcgtgggccagatggtgaagagctgttacatgggcagacat
gccttcaccctcagcccccctcctccgccagtcaatgtcacccaggagacagatctgaac
gattctctgaagcactggagagagatgcttgctcctctaaaccaaactcaaggctcagga
tccatgtccacctccagtactctgcttccatcagttagctctagtgggactcattctcca
gttccaacctcaggtgttactggaatccaggacactccagtcaacagactcactgctcag
ggtcagagtgacacggacagctcagactccgccctcactcaagaatcccactcaggggga
agggccgagcctgttgctatagtaacccctcacctgttgctagcggtgtgtggtctactg
gacaacctgctggttgtgcttcctgagtttagtctatctgccctcaagcacaaccaaata
ctacagggcttggccagtgtggtggacgcggcaaccatatctcaatgtgtcagtgagtta
aggacacctctcctgccagctgctatggaagatgctaggaaccaggtgctgagtagcttg
tattatgtgcaaagtttgtgtaagctcctgcagtcagcagcaatgcacagtgacgatgtg
ctgttccaccgagagctcttcaaacccctgctgaacaacctaatttccatcctcacgctg
tctgtcgctgacttggatgcacaggcccagggtgcagtgctcaacacctgggcggatgtg
ttgatgctcctggctactctgctgcgcaggaaccaagctgcggtcggcccatctgtcggt
gtggcactggggaaacactggcagtgcttttcagataccatccgagtgtgtttgaaccaa
tcgggcacggagtcttctctctacacgtcgaccctgcactttctgtgtgtgctgttcaca
gaggaggctaaaaggagatcgggaggccacacagaggatctgaccagcaagggcccaagc
tcctccctaactgcggtcatatcttctgagcctggagaggtcatgtgtgaactattacta
gagcaatatgagaagattccgttccaggatcccctcaaaaaggtgacggccaaagcgttc
atgtctctgttagcctgtagctccagtgctcagagttatgcatgtaaagctggtgtgatt
gacagctgtgtggaacgcatgaagcacatttacgcagagcttcacctggagtctgtgaaa
acgggcaagagcactcacaggaggaagcaggtggagaacagcatgagagaacttaagatg
attctagagatactgagaaattgcctgtatcaacataatgaatgcaaagctgtggctaca
gagctgcgtctggcagcggtgctgttggccctgtggccctggttcctgctggatgacctc
actatgacggcggccctggaactgctctgtgtctatactgctaactacacagctgcatgc
agtgctttatgtagcagcagcagcagcagttgtagctctggctcagttcaggctgttctt
cctaagactgcggtcacaaattcactgatgcatggggtgatgaaactggcctcccaggtt
gcccctgacaacagcagcatccacagtctggctttctcattgctggccaacctggccatc
tcaaaggactgcaaaggggtactgctgaagagtaacttcctgcagcagttcctgtctctt
cccatgcctaaggcaggtggtcgaagcggcgttccgacagcagatcctctgtccctgtgg
ctcaggctgctgctgaacgtgtcgttcggggatgacggacagcagatgatcctcaggctc
cgaggggctttggagctgctggtcgaactggcccagtccaaacactccagcacgaaaccc
accgtcctgctcattctccacaacatctgcttctgctccgctaacaagcccaaagtctta
gccaatgataaagctgttgagacactagtgtcttgtctgagcagtagttcatcagatata
cgtaccataggagcttcagcactttgggctctgttgcacaacaatcagaaggcaaaggcc
actttgaagtgtccttccatcagactgaaagttgaagaggcatacgtgtccgccaggaaa
gatgaagagcacagaagtgacaaacccatgaacgtctatcttctgaagtgcctgagaaat
ctcacccacattttcaactcttaa
DBGET
integrated database retrieval system
