Megalobrama amblycephala (Wuchang bream): 125257588
Help
Entry
125257588 CDS
T08212
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125257588 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125257588 (spata13)
Membrane trafficking [BR:
mamb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125257588 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
125257588
NCBI-ProteinID:
XP_048029999
LinkDB
All DBs
Position
LG22:complement(11299980..11327938)
Genome browser
AA seq
1225 aa
AA seq
DB search
MIKAPSSDPQGSSHNNDPQRDCFAKEQLMNPSLMSGCRVQVQPVLSEPCYENHLNRLNCQ
AQSVPSRTVRLFSTQTKCEDSSSLRGPPVTPQAWSGLASFRVMGSFKKLRTSVLQGIQNR
NNAMAAGQERNMSLMLEDGGSFLVTKREVATNQTKEIDKVTNGTSQTGKMSSVSDEEDCE
EEEGGFQRNSHFSRSIRKAYGAGRISLLDTVKTDSPSTSEPYPSSTVESVVPCKNLETQE
NVLKRLSKSADNLHVFKSHFRCKVTSTEPQNPECTHTIILQRTTSSSSVDFQERDSVRRQ
SPMRTRGHLQKLVGSLTDLTVKRKNTPDPPPRVPLSPLSQLHDDYSRRTSCVSMSGRQRR
PLPTPSKAQQANTYEHIPTLHSAPSCPAVFSSTLDESLEPPSKTTALISDSVQVTVSSTG
FCSDAPVCPLEKYCEPMECHQNGINDHYSQMPKQCSSPSQKQTVNGINANLECLWTEEKE
TDDLEASSDDLVRNAFLKSDDSSESPLITPTTPNSPAFSSDSPSSVVPRKRAGRSRPRPV
SDYGQLASRKYCIPEEDRESENMDYTSQKDYNSSGSYIESNRPENGHVCTQTESRKRRPI
SVIGGVDLFSSPTAEQKDDTESLPSPVSRPPMPSHRVPPYRAVSARLRPCVFSQSTPIGL
DRMGRRRARRVLSDGSSDPMLDDSVSEEDGSFEELTEGTPYLQPEVDLFTLNQYIHSGHA
VYAEALWDHVTMEEQELAFKAGEVIRVLDVREQDWWWGMVGDREAWFPSSFVRVRVNQGD
SSSESVESVPDAEESVPSDAHKQNSEHREQMRANVVKEIMDTERVYIKHLKDICEGYIRQ
CRKHPGMFTDAQLKTIFSNIEDIYRFQRKFLKDLEKKYNSENPHLSEIGSCFLQQEEGFS
IYSEYCNTHPVACAELQRLMKQGRYKHFFEACRLLQQMIDISISGFLLTPVQKICKYPLQ
LGELLKYTPKDHSDYAGVCAAHKAMKNVASLINERKRRLESIDTIAHWQVAILHWAGDDV
LTRSSELIHSGELTRIVRPGKTQQRSYFLFDHQLVFCKKDVLRRDLLHYRGRMDTDQLEP
IDLPDGRHAELGLLKNAFLLRHAENLNVLCVLCCKKSQDKERWLQAFARERRRVQEDQEM
GMEITEAQRKQAVHNARKSKQGKMKKMNYSGHPVPPHHQPLHPLHQRHVTLPTSVPQQQV
FSLAEPKKKPAHLLYSLARSALFRK
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcaccttcgtcggacccgcagggctcctctcacaacaatgacccacagagg
gactgtttcgcaaaggaacagctgatgaatccaagtctgatgtctggttgtagggtccag
gtgcaaccggtgctatccgagccttgctatgagaaccatcttaacagactgaattgtcag
gctcagtctgttccctccaggactgtacgtctgttttccacccagacaaaatgtgaggac
agttcttcgcttagaggtccacctgtcacaccacaggcttggtctggattggccagtttc
cgcgttatgggttctttcaaaaaactgcggacttctgtgctccaaggaatccagaaccgg
aacaatgcgatggcagccggtcaggagagaaacatgtccttgatgcttgaggacggcggt
agtttcttagtaaccaaacgagaggtcgcgaccaatcaaacaaaggaaattgacaaagtg
acgaatgggacgtctcaaactgggaagatgtcttcggtttcagatgaggaagattgtgag
gaggaagagggtgggtttcagaggaattcccacttctctcggagtatacgcaaagcttat
ggggcaggacggatctcattgcttgacacagtcaagacagatagcccgtctaccagtgag
ccttaccccagcagcactgtggaatctgttgtaccttgtaagaaccttgagactcaagaa
aatgttctcaaaagactaagcaaaagtgcagataatcttcatgtctttaagagccatttt
agatgcaaagtcacctcaactgagccacagaacccagaatgtacccatactataattctt
cagaggaccaccagttcctcatcggttgacttccaggaacgcgattcagttaggcgtcaa
agccccatgaggacacgaggacatttgcaaaagcttgtcggtagtttaacagacctgacg
gtgaagcgtaaaaacacaccagacccccctcccagagtaccgctgtcacctctcagtcag
ctacacgatgactactcccgcagaacttcctgtgtatccatgagtggccgtcaacggagg
cctttacccactcctagcaaagcccagcaggccaacacttatgaacatatcccaacttta
cactccgctccctcctgccccgccgtctttagctctaccctggatgaatctctcgagcct
cctagcaaaacaacagccctcataagcgactctgtccaagtgactgtgtcctcaacaggc
ttctgttcagatgccccagtctgtccactggaaaaatactgtgaacctatggagtgccat
caaaatggaataaatgaccactactctcaaatgcccaagcagtgctcaagccccagtcaa
aagcagacagtgaatggcataaacgctaacttggagtgtctatggactgaagagaaggaa
actgatgatcttgaggcttcatcagatgacctagttagaaatgcatttctcaaaagtgat
gattcctcagaatcccccttgataactccaacaacaccaaactctccagccttttccagt
gactctccctcttctgtggtacccaggaagagggcaggtcgctccagaccccgtccagtg
tctgactatggccagctggccagcagaaaatactgcatcccagaggaggacagggagtcg
gagaatatggactacacttcccaaaaggactacaatagcagtggcagctacatagagagc
aacagacctgagaatggtcatgtgtgcactcaaacagagagcagaaagagacgtcccatc
tccgttattggaggagtggatctgttttcatctccaactgctgagcagaaggacgacact
gaaagtttgccttctccggtttctcgtcctccaatgccctctcacagagtgcctccatac
cgggcagtgtctgcccgtctgagaccctgcgtcttttcccaaagcacacctatcggtctg
gataggatggggcggcgcagagcgcgcagagtgctcagtgatggcagctctgatccaatg
cttgatgacagtgtgagtgaggaggacggcagctttgaagaactgactgaaggaacacca
tatctccaaccagaagttgatcttttcactctcaatcagtacatacactctggccatgcc
gtgtatgcggaggctctgtgggatcatgtcacaatggaagagcaggagctggccttcaaa
gccggggaggtgatccgggttctggatgttcgggagcaggactggtggtgggggatggtg
ggggaccgcgaggcctggtttccctccagctttgtgcgggttcgagtgaatcagggggat
tcaagcagtgagagcgtggagagcgttccagatgcggaagagtccgtcccatcagatgca
cacaaacaaaactcagagcacagggagcagatgagagccaatgtggtcaaagagatcatg
gacacagagcgcgtttacataaaacatctcaaagatatctgtgagggatatatccgccaa
tgcagaaagcaccctggtatgtttactgatgcacagctaaagacaatcttcagcaacatc
gaggacatctacaggttccagaggaagtttctcaaggacctagaaaagaaatacaacagc
gaaaaccctcatctaagtgagattggctcctgcttccttcaacaggaggaaggtttctcc
atatactctgagtactgtaacacgcatccagtggcgtgtgctgaattgcagcgactgatg
aaacaagggagatataaacacttctttgaagcctgtcgtctcctacagcagatgatcgac
atctccatttctggcttcttactcacacctgtacagaagatttgtaaatatcctcttcag
ctaggagagcttttgaaatacacacccaaagaccacagtgactacgcaggggtgtgtgcc
gcacataaagcaatgaagaatgtggcaagtctgataaacgagaggaaaaggcgacttgag
agcatcgacaccatcgctcactggcaggtggccatcctccactgggcgggtgatgatgtg
ttaacgcgaagctccgagctcatccactctggcgagctgacgcggatagtacgacccggt
aagacgcagcaacgcagctacttcctgtttgaccaccagctggtgttttgtaagaaagac
gtcctgcggagagacctgctacactaccgtggccgtatggacacagaccagctcgagcca
atcgacctgcctgatggacggcacgctgagctgggcctattgaagaacgcgtttctccta
cggcatgcggagaacctgaatgtgctgtgtgtgctgtgctgcaaaaagagccaggacaag
gagagatggctgcaagcgtttgctcgagagcgcagacgggtacaggaagaccaagagatg
gggatggagattactgaggcccagaggaagcaagcagttcacaacgccaggaaatctaaa
caaggcaaaatgaaaaaaatgaactattctggccatcctgtgcctccccaccatcagcct
ctacatcctctccatcagcgacatgtgaccttgccaaccagcgtcccgcagcagcaggtc
ttctctttagcagagccaaagaagaaaccagctcacctgttgtactcacttgcacgcagt
gccctcttcaggaaatga
DBGET
integrated database retrieval system
