Megalobrama amblycephala (Wuchang bream): 125257976
Help
Entry
125257976 CDS
T08212
Symbol
trim23
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM23 isoform X1
KO
K07963
tripartite motif-containing protein 23 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125257976 (trim23)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
mamb04031
]
125257976 (trim23)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125257976 (trim23)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125257976 (trim23)
GTP-binding proteins [BR:
mamb04031
]
Small (monomeric) G-proteins
Arf/Sar Family
Others
125257976 (trim23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arf
Roc
Ras
SRPRB
G-alpha
zf-RING_UBOX
zf-B_box
zf-RING_5
Gtr1_RagA
zf-RING_2
MMR_HSR1
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
125257976
NCBI-ProteinID:
XP_048030701
LinkDB
All DBs
Position
LG2:complement(38420724..38436001)
Genome browser
AA seq
594 aa
AA seq
DB search
MSCSHRRVIRWFSPRMAAAVGVNKQASAASMDPCVRHGRGTTANAVKVLECGVCEDVFSL
QGDKVPRLLLCGHTVCHDCLTRLPLHGRAVRCPFDRQVTELGDSGVWGLKKNFALLELLE
RLQNGATNQSGMSEDALRDMGECVIRCDEDETHTASMYCTVCATHLCAECSQLTHSTRTL
AKHRRVPLADKPHEKMLCPQHQVHAIEFVCLEDGCQPGPLMCCVCKEYGKHQGHKHAVLE
GEANQIRASILDMAHCIRTFTEEVSEYSRKLVGIVQQIEGGEQIVEDSMGMAHTEHVPGT
AESARSCVRAYFADLHETLCRQEEMALSVVDAHVRERLIWLRQQQEDMTILLSQVSTACL
HCEKTLQQDDCRVVLAKQEINRLLETLQKQQQQFTELADHIQLDAGIPVTFTKDNRVHIG
PKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHK
LRPLWKHYYLNTQAVVFVIDSCHRDRLMESHSELAKLLTEKELRDALLLIFANKQDVPGA
VSVEEMTELLSLHKLCCGRSWHIQGCDARSGMGLHEGLDWLSRQLVAAGVLDVA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcatgttcacaccgacgtgtcatcagatggttcagtccgaggatggccgctgctgtc
ggtgtaaataaacaggcaagcgcagcatcgatggatccgtgtgtgcgacacggccgcgga
accaccgcaaatgcggtgaaggtgttggagtgtggtgtgtgcgaggatgtgttttcacta
caaggggacaaggtgccgcggctgctgctgtgcggacacacagtgtgtcacgactgcttg
acccgtctgcctcttcacggcagggcagttcgctgcccctttgacagacaggtcacagag
ctgggagactcaggtgtgtggggcctaaagaagaactttgccctgttagaattgcttgaa
cggctacagaatggagccaccaatcagtcaggcatgtcagaggatgcgcttcgtgacatg
ggcgagtgtgtaatccgctgtgatgaggatgagactcacactgcttccatgtactgcacg
gtgtgtgccacgcacctgtgtgccgagtgttcccagctcacccactccacccgaacgctg
gccaagcatcggcgtgtgcccctggcagacaagccccatgagaagatgctctgcccgcag
caccaggtgcacgccattgagtttgtctgcctggaagatggctgccaacctgggccgctc
atgtgctgcgtgtgcaaggagtacggaaagcaccaagggcataagcatgctgtactagag
ggtgaagccaaccagattcgagcatccatcctggatatggcacactgcatccgtacgttc
acagaggaagtgtcagagtactccaggaaactagtgggcattgtgcagcagattgaagga
ggagagcagatcgtggaggacagcatgggcatggcccacactgaacatgttccaggaaca
gcagaaagcgcccggtcttgcgtacgtgcctactttgctgatctgcatgagacgttgtgt
cgtcaagaggaaatggctctgagtgtggtggacgcacacgtccgagagaggctgatctgg
cttcgacagcagcaggaggacatgaccatactgctgtcacaagtgtccactgcctgtctg
cactgcgagaaaacactgcagcaggatgattgcagggtggttttggcgaaacaggagatc
aaccgactactagagacactgcagaaacagcagcagcagtttacagagctggctgaccat
attcagctggatgcagggatccctgttacttttacgaaggacaaccgtgtgcacattggt
ccaaagatggagatccgggttgtgactttgggcttagatggagctgggaaaactactatt
ctcttcaaactgaagcaagatgagttcatgcagcccataccaactataggttttaatgtc
gaaactgttgaatacaaaaacctgaaattcaccatttgggatgtgggtggcaagcataaa
ctccgtccactatggaaacactactatctgaacacacaagcggtggtgtttgtgattgac
agctgtcaccgagaccggctgatggagtctcacagtgaactggccaaactgctgacagag
aaagaacttagagatgctctgctgctcatcttcgccaacaaacaggacgttcctggtgcg
gtgtccgtggaggaaatgacagagctcctgagcttacacaaactgtgctgtggccgcagc
tggcacatccagggctgtgacgcccgcagcggtatgggtctacacgaggggctggactgg
ctctcacgccagctggtggctgcaggagttttggatgtggcctga
DBGET
integrated database retrieval system
