Megalobrama amblycephala (Wuchang bream): 125258107
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Entry
125258107 CDS
T08212
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125258107 (trpc1)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
125258107 (trpc1)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
125258107
NCBI-ProteinID:
XP_048030904
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Position
LG22:complement(32068550..32102593)
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AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDVSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKVIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVVLLWP
LLSVCYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNGEKKNLTGPPLQL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALRMVAHSKFKN
KELDRKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLISFTIGLTQLYGKDQKDPSTTKNETKDCEGIFCQQQSNDTFHTFMGTCYALFW
YIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFNDKCTLPPPFNILPSPKTLCYLVISLSKWICSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIMCCLVHRYLTATRQKMQSMDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggacgtgtcctcaccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtaaagaaactcctggaggagaaacgacatggtgaattaaacattaactgtgtggatgtg
cttgggagagatgctgtcaccatttcaatcgagaatgagaatctagacatattgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagtcgacatcctgctaaaccatcggcccaggcgttcctccaagccttctatt
gcgaaagtgattcagcgcattcaaaacccagagtattccaccaccatggatgttgctccg
gtcattctcgctgcccacaggaacaattatgagattttgaccatgctattaaagcaagac
atctctctgccccgtcctcacgctgtagggtgcgagtgcactctctgtaatgccaagaac
aagaaggacagtcttcgccactcgaggttccggctagatatctaccgatgcctcgccagc
ccatccttgatcatgctaacagaagaagaccccatcctgagagcatttgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcggaatgattatgaagaacttgcc
aagcagtgcaagatgtttgccaaggacctgctggctcaggcccgcaactctcgcgagctg
gaggtcatcctgaaccacacgtccaatgaggaccacgtagacaagagaggcctgctggag
gaacgcatgaacctcagtcgcctcaaactggccatcaaatacaaccaaaaagagtttgtc
gcccagtccaattgtcagcagttcctgaacacggtgtggttcggcgagatggcgagctac
cgccgcaagcacacatgcttaaagatcctgtatgttttgagtgttgttctgctgtggccg
ctgctgtccgtctgctacctgctgggacctcgttctcgcgtgggccaggtcatccacaca
cctttcgtcaagttcatcattcacagtgcatcttacttcacctttctactgcttcttaac
ctgtattcactggtctacaatggggagaagaagaacttaacgggtccccctttgcagttg
atagactaccttctcattctctggatcataggcatggtgtggtcagatgtgaagcgtcta
tggtatgagggattagaagatttcctggaagagtcacggaaccagctaagtttcgtcatg
aactcactttatttggccacctttgctctaagaatggtggctcacagcaagttcaagaac
aaggaattagataggaaaaactgggatgcattccatcccatcctggttgctgaagggctt
tttgctttcgccaatgttctgagctatctgcgtctcttcttcatgtacaccaccagctcc
atcttggggcctttacagatctccatgggccagatgctacaggagtttgggaagtttctt
ggcttattcctgcttgtgctcatctctttcaccattggcctgacacagctgtatggaaaa
gaccagaaggatccatccacaaccaaaaatgaaaccaaggactgtgagggcatcttctgt
cagcagcagagcaacgacacctttcacacgttcatggggacatgttatgccctcttctgg
tacattttttctctggcgcacgtggctctgttcgtcacaaggatcagctacacagaggag
ctgcggtcatttgttggtgctcttatcgtcggaacctacaacattgttgtagtcatcgtt
ctcactaaactcctggtggctatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgctcgggctaagctgtggcttagctactttaatgacaagtgc
acactgcctccacccttcaacatcctcccctcacccaagactttgtgctacctggtgatc
agcctgagcaaatggatctgttctcacacctccacaggcaaggtcaagagacagaatagc
ctcaaggaatggaggaacctgaagcagaaaagagacgagaactaccagaagattatgtgc
tgtctagtgcaccgttacctgaccgccacaaggcagaagatgcagagcatggatcaggcc
acggtagagaacctcaacgatcttcggcaagacctatccaagttccgcaatgaaatgagg
gaccttttgggcttccgcacttccaaatatgccatgttctaccccagaagctaa
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