Megalobrama amblycephala (Wuchang bream): 125258152
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Entry
125258152 CDS
T08212
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125258152 (vldlr)
Membrane trafficking [BR:
mamb04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
125258152 (vldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Mucin
Motif
Other DBs
NCBI-GeneID:
125258152
NCBI-ProteinID:
XP_048030977
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Position
LG2:complement(38767688..38795211)
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AA seq
876 aa
AA seq
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MVTSILGLLILPVCLQLCGFSRGSRTECEQSQFQCGNGRCIPSVWQCDGDMDCSDGSDET
SCVRKTCAEVDFVCRSGQCVPKRWQCDGEPDCEDGSDESIEMCHTRTCRVNEFSCGVGST
QCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCASGRCVSRNFVCNGEDDCGDGSDE
QDCAPSSCGPSEVPCGNNTCIPRSWLCDDDVDCQDQSDESPERCGRNPTPPAKCSPSEMQ
CGSGECIHRKWRCDGDPDCKDGSDEKNCSARTCRPDQFKCDDGSCIHGSRQCNGFRDCAD
GTDEVNCKNLTQCNGPDQFKCRSGECIEMSKVCNKVRDCPDWSDEPIKECNMNECLLNNG
GCSHICRDLTIGYECDCTPGLQLIDRKTCGDVNECLNPGICSQICINLKGGYKCECHNGY
QMDPTSGVCKAVGKEPCLIFTNRRDIRKLGLERREYTQIVEQLRNTVALDADFIQQTIFW
ADLGQKAIFSTVLDKQEASHTKVIDNVQMPVGIAVDWIYKNIYWSDLGSKSIAVANFNGT
KRKVLFNSGLKEPASIAVDPLSGFMYWSDWGEPAKIEKSGMNGIDRQVLVETDIQWPNGI
TLDLIKGRLYWVDSKLHMLCSVDLNGDNRRKVLQSPDYLAHPFALTVFEDRVFWTDGENE
AIYGANKFTGSDVTVLASNLNEPQDIIVYHELIQLSGTNWCNEKMENGGCSFMCLPAPQI
NKHSPKFTCVCPQGQTLTSDGLRCIPEATTVDPRDGGRVTPHPSHPKASAISKVASEPVH
AEGNISTSIHEVNSSAKGSAAAWAILPVLLLAMAAAGGYLMWRNWQIKNKKSMNFDNPVY
LKTTEEDLNIDISRHSASVGHTYPPLSVVNTEDDLS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtctattctggggcttctcatcctgccagtatgtcttcagctgtgtggattt
tcgcgcggttcccgaacagaatgtgagcagtctcagttccagtgtgggaatggccggtgt
attccgtctgtatggcagtgcgacggtgacatggactgctcggacgggagtgacgagacg
tcctgcgttaggaagacttgtgccgaggtggacttcgtctgtcgcagtggacagtgtgtt
cccaagagatggcagtgcgacggtgaaccagactgtgaggatggctcagacgaaagcatc
gaaatgtgccacacgagaacctgtcgagtgaacgagttcagttgtggcgtcggctccacg
cagtgcattccggtcttctggaagtgtgatggtgagaaagactgcgacaacggagaggac
gagattaattgtggtaacattacgtgcgcccctctggagttcacctgtgccagtggtcgc
tgcgtgtctcgtaatttcgtctgtaatggtgaggatgactgtggggatggcagcgacgaa
caggactgtgctccgtcctcttgcggccccagtgaagttccctgtgggaacaatacgtgc
attcctagaagctggctatgcgatgacgatgtggactgccaggaccaatcggatgagtcg
ccagagcgttgcggccgcaacccaactccgccagctaagtgttcacctagtgagatgcag
tgcggctctggggaatgcatacacaggaagtggcgctgtgacggcgacccagactgcaag
gatggcagtgacgagaaaaactgctctgcccgtacctgcaggcctgaccagttcaagtgt
gatgacggcagttgtatccatggcagccgacagtgcaacgggtttcgagattgtgcagac
ggcacagatgaagtcaactgcaaaaacttaactcagtgtaacggtcctgaccagttcaag
tgtcggagcggagagtgcatagagatgagtaaagtgtgtaataaagtccgtgactgtcct
gactggagtgatgaacccatcaaagagtgcaatatgaacgaatgcctgctcaataacgga
ggctgctcgcacatctgccgcgacctgacgattggctacgagtgtgactgcacgccagga
ctccagctcattgatcgcaagacctgtggtgatgtcaatgagtgcctcaaccctggtata
tgtagtcaaatatgtataaatcttaaaggaggctacaaatgtgagtgtcacaatggctat
caaatggaccccacttctggagtgtgcaaggctgtaggtaaagagccctgtcttattttc
accaatcgaagagatatccgtaaactaggcctggagcgccgtgaatatactcagattgtg
gagcagctgcggaacacagttgctctagatgccgacttcattcagcagacgatattctgg
gctgacctggggcagaaggcgatttttagcacagtattggataagcaggaagcaagtcat
acgaaagtgattgacaatgttcagatgccagttgggattgctgtggactggatttacaaa
aacatctactggtcagacctgggcagtaagagtatagctgtggccaacttcaatgggacc
aagaggaaggtgctctttaacagcggcctgaaagaaccagcctctattgctgtggatcct
ctttcaggattcatgtattggtcagattggggagagccagctaagattgagaagtctggt
atgaacgggattgacagacaagtcctagttgagacagacattcagtggcccaatggaatc
actcttgatttgattaagggaagactctactgggtggattccaagctgcacatgctctgt
agtgtagacttgaacggagacaaccgccggaaggtgctgcagtcaccagactacctggcc
cacccttttgcccttactgtttttgaggatcgagtgttctggacagacggtgaaaatgag
gccatctacggcgcaaacaagttcacaggatctgatgttactgtgctggccagtaacctc
aacgaaccccaggacatcattgtgtaccatgagctaatacagctgtctggtaccaactgg
tgtaacgagaagatggagaatggaggctgttccttcatgtgtctgccagctccacaaatt
aacaaacattcccctaaatttacctgtgtgtgtccgcaaggccaaacactcacctcggat
ggcctgcgctgcataccagaggcaactactgtcgaccctcgagatggagggagggtgacc
cctcaccccagtcaccctaaagcatctgcaatatcgaaggttgcctctgaaccagttcat
gctgaaggaaacataagcacctccatacatgaagtaaattcatcggccaaaggatccgct
gctgcctgggctattctacctgtgttgttattggccatggctgccgcgggtggttattta
atgtggcgcaactggcagatcaaaaataagaagagcatgaacttcgataatccagtatat
ctgaagaccacagaggaagacctcaatatcgatatcagtagacacagtgcttctgtaggc
cacacgtatcctcctctttcagtggtaaacacagaagatgacttgtcataa
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