Megalobrama amblycephala (Wuchang bream): 125258500
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Entry
125258500 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125258500
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125258500
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
125258500
NCBI-ProteinID:
XP_048031423
LinkDB
All DBs
Position
LG22:29365554..29372524
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AA seq
971 aa
AA seq
DB search
MMGGTPSSRVLWHWWTVLLVFVSLPFLSTLAVGMIMKYQTFEEDALSTVIGNLAKDMFLN
PSDDSKTNFKMMKQFNASFIRLREKDGQLTIGERIDREKICKNAVQCLIAFDVVSLSNEQ
FQLIHIEVEVKDINDHAPEFPRKESTLEISENAALGTRISLDVAMDEDVGSNYIQSYKIS
VNSHFTIDVLSRADGVKYAELVLMKELDRETQASYVLELVATDGGNPPRSSTTKINVKVK
DFNDNSPVFSQTNFSVDILEDSPVGFLLLDLNAVDPDDGLNGEVVYGFGNQVPXEIQQRF
SIDRKSGQLTLKSPIDFESKKTYEFDIKASDLGPNPRPSICKVVVQVQDVNDNAPEITIT
PMTPVTAEIAYITEAAAKGSFVALISTADRDSGANGQIHCTLYGHNNFKLQQAYEDSFII
VTTSPLDREQIAEYNLTVVAEDLGSPPLRTSKQYTIRLSDENDNAPVFSKPVYEVSLMEN
NAPGAYITTVVARDLDLGQNSEISYELLDTYIIGSPVSTFVSLDPATGSLYALKSFNYEV
LKQLQLRIQASDGGSPQLQGSAIINLKIVDQNDNAPSITQPPLNNGSAEVLLPKDAPSGY
VVTQILARDADEGVNAELSFRISEGASMFSINRATGEIYLNRELNYKDYENLRITVSVSD
NGRPLLTTVVTINFSITAGSLPSDRSIFRHRTDEETWEGDHSVIIIVVLAGSCALLLLAI
ILIATSCNKQKKDNRGDSHSGKEDIVKADGNHCDPLIPMHSDIVFDIQPSYSNKPNFSGF
IQTCGNISCSSEDGTCVFDLEDKSHGVKSEDYSNPPGYGNPMRLIKIWKGTSTISAGDPQ
FSGKDSGNGDSDYNDSDSDISGDGLRKGLWACTSECKILGHSDDCWCPTAATTNSNLAHS
YRSCSLQRDNLRRENYHQAHIPKTDGLQNVCEKVMHSEYDYITIVNSPQQVRGHDIPVYS
PTATHCSTHEV
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgatgggagggactcctagcagtcgagttttgtggcattggtggacagtgcttctcgtc
tttgtgtcactgccttttctgtctactttagcagtgggaatgatcatgaaatatcagact
tttgaagaggacgctttatccactgtcatcggaaacttggccaaggacatgtttttaaat
ccctcagatgactcgaagaccaatttcaaaatgatgaagcagttcaatgcatcttttatt
agactccgagaaaaagatggacagctaacaattggagaacgaatagacagagaaaaaata
tgtaagaatgcggtccagtgtctcattgcattcgatgttgtgagtctctccaatgagcaa
tttcaattaattcatattgaagtggaagtaaaggacatcaatgatcacgctcctgagttc
cccagaaaggaatcaactttggaaatttcagaaaacgcagcactcggcactagaatttct
ttagatgttgctatggacgaggacgtgggttcgaactacattcaaagctacaaaatatct
gtcaacagtcacttcactattgacgtgttgagcagagccgatggggttaaatatgcggag
ctggtgctaatgaaagaactagacagggagacacaagcctcctatgttttggagcttgtt
gcaacagacggaggaaatccaccaaggtccagcaccacaaaaatcaacgtcaaagtaaaa
gactttaatgacaatagccctgtgttcagccagaccaatttttctgttgatatacttgag
gactcgccggtggggtttttgcttttggatttgaacgcggttgatccagacgatggtttg
aatggggaagttgtgtatgggtttggaaatcaggtgcctntggagatccagcagcgtttc
agcattgaccgaaaatccgggcagttgacgctcaagagcccgattgattttgagagcaag
aaaacatatgagttcgatataaaggcatctgacttgggtcctaatccgagaccatccatc
tgtaaagttgttgttcaagtgcaggatgtgaatgacaatgcaccagaaatcaccattacc
cctatgaccccagtcactgcggaaattgcatacatcacagaggctgctgctaaaggaagc
tttgtggctcttatcagcactgcagacagggactcgggcgcaaacggacagattcattgt
accctctatggacacaataacttcaaactccagcaagcctatgaggacagttttattatt
gtaacgacatctccacttgatagagaacaaattgcggagtataacttaacggttgttgcc
gaagacctgggatcacctcccttaagaacatctaagcaatatactataaggctgagcgat
gagaatgacaatgcccctgtgtttagtaaacctgtctatgaagtatccttgatggagaac
aatgcaccaggtgcatatatcacaactgtagtggccagagacctcgacttaggacaaaac
agtgaaatcagctacgagctcctggacacctacatcataggctctccggtgtcaactttt
gtctctctagatcccgctacgggctcgctctatgcgctcaaaagtttcaactatgaggtc
ctcaaacagctacagctacgtattcaagcaagtgacggaggctcgccacaactccaaggc
agcgcaataatcaatctaaaaatagttgatcagaatgataacgctccctctatcacacag
cctcccctaaataatggttctgccgaggttctactgcccaaagacgcgccttcaggttac
gttgtaacccagatacttgctagggatgctgacgaaggtgtcaatgcagaattgtcattc
agaatctcagagggggcctcgatgttctccattaatagagccaccggagaaatttatctg
aatcgtgaactaaactacaaagattacgagaacttgagaataacagtaagtgtcagtgac
aacgggagacctttactaactacagtagtcactatcaatttcagcatcactgcaggatct
cttcctagtgaccgcagtatattcaggcacagaactgacgaagagacatgggaaggggat
cattcagttattataattgtggtactggcggggagctgcgcactactacttttagcaatt
attcttattgcaacttcttgtaataaacaaaagaaggataatcgaggcgacagccattct
ggaaaggaggacatagttaaggcggacggaaaccactgcgacccactaattccaatgcac
agtgacattgtgtttgatattcagccttcttattcaaacaagccaaacttttctggcttt
atccagacatgcggcaacatttcctgcagctctgaagatggtacatgtgtctttgatcta
gaggacaaaagccacggtgtcaagtcagaagattattccaatccacctggttatggtaat
cctatgagactgattaaaatatggaaaggcacctcaactatatcagcaggagatcctcaa
ttcagtggaaaggacagtgggaatggagacagcgactacaatgacagtgattcagatata
agtggcgatggactaagaaaaggtctatgggcatgcacaagcgagtgcaagattttgggc
cattcagatgactgctggtgtccaactgctgccacgacaaacagcaatttagcacattcc
tataggtcatgttcacttcaacgagacaatctcaggagggaaaactaccaccaagcccac
attccaaaaacagacggactgcagaatgtctgtgagaaagtaatgcacagtgaatatgac
tatataactatagtaaattcacctcaacaagtcagaggacatgacatcccagtgtattca
ccaacagcaacacactgttccacacatgaagtgtaa
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