Megalobrama amblycephala (Wuchang bream): 125258542
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Entry
125258542 CDS
T08212
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125258542 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125258542 (stau2)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125258542 (stau2)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
125258542 (stau2)
mRNA cycle factors
Stress granule specific factors
125258542 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
125258542
NCBI-ProteinID:
XP_048031485
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All DBs
Position
LG22:20390819..20571886
Genome browser
AA seq
684 aa
AA seq
DB search
MAQVKVQTSAPLSGPGLTAVVPAVAMPSPGALGLQPTINGTVPATTPTCPSPASGFVDST
VPASPSGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNEKGPAHAKIFTVQLSLGN
QVWESEGSSIKKAQHSTATMALTESSLPRPPPRSPKADSNSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMFNQRYHYPVPKVFYVQLTVGNNEFIGEGRTRQAAR
HNAAMKALQALKNEPIPERPPQCSEEKKETEENSDASKSEISLVYEIALKRNLPVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQELKKLPVLPVVEKPKVHY
KKRPKTILKTGPEYGQGMNPISRLAQIQQAKKEKEPEYMLLSERGMPRRREFIMQVKVGT
EVTTGTGPNKKVAKRNAAEAMLLQLGYKASTPLQNTPEKMDNKGWNGQRAAFPETTTNTQ
KGILHLSPDVYQEMEASRNKGVPGAPGNYLTPKDIGQGSAGPFYTPSVGNTAAIARELLL
SGTSPTAEALILKGKAPALACGSIQPSQQLEYLAHIQGFQVQYSDRQTDKEFMTYLTLSP
VQMTFHGIGSSIPASHDQAALSALKQLSEQGLDPVDGPIEVENGSCDMYVHTEPQAKRLA
ERTDSKPTNSGTTAQDCKDSKAVV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtgcagacctcagcccccttgtctggacctggcctgaccgctgtg
gtgcccgctgtggccatgcccagcccaggagctctgggtctgcagcccaccatcaatggc
acagtgccagccacaacgcccacctgccccagccctgcctctggctttgtggactccact
gtaccagccagcccatcaggccctcctcaagaaaacatggcaaaccctaaagagaaaact
cccatgtgtttggtgaatgagttagcccgtttcaacaggattcaacctcaatataagctg
ctgaatgagaaagggcctgcacatgctaagatcttcacggtgcagctgagcttggggaac
caggtatgggagtcagaaggcagcagcatcaaaaaggcccagcactccacagctaccatg
gccctgacagagagcagtctcccccgacctcctccccgctcccctaaagccgacagcaac
agcaacccaggcagcatcactcctacagtggagttgaatggcttggccatgaagcgaggg
gagccagctatctatagacctctggaccccaaacccattcccaactacagagccaattac
aactttagaggaatgttcaaccagaggtaccattacccagtgcctaaggtattttatgtg
cagctgacagtggggaacaacgagtttatcggagaggggcggactcgccaagctgcccga
cacaatgcggcaatgaaagcccttcaggccctgaagaacgaacccattccagaaagacca
cctcagtgttcagaggagaagaaagaaacggaggagaacagcgatgcaagcaaatccgag
atcagcctggtctacgagatcgcccttaagaggaacctgcctgttaactttgaggtgctg
aaggaaagcggacccccacacatgaagagtttcctcacacgtgtgacggtgggggagttc
tcagccgagggtgaggggaatagtaagaaactctccaaaaaaagagcggccctctccatc
ttacaagaactgaagaaactgccagtccttcctgtggtggagaaacccaaagtgcattac
aagaagcggcctaagaccatattaaagacaggaccagaatacggacagggcatgaaccct
attagcagattggctcagattcaacaggccaaaaaggagaaagagcctgaatatatgctg
ctttcagagagaggaatgccccgccgtagagaattcatcatgcaggtgaaagtaggtact
gaggtgaccacaggaactggacccaataagaaagtggccaagcgtaatgcagctgaggcc
atgcttcttcaactgggctacaaggcttctacaccattacagaatactccagaaaagatg
gacaacaaaggctggaatggacaaagggctgcttttcctgaaacaacaaccaacacacaa
aaaggaattcttcacctctccccggatgtgtatcaagaaatggaagcaagcaggaataag
ggagtccctggtgcccctggaaactatctgacacccaaagacattggccaaggttctgca
gggccattctacaccccatcggtgggaaacaccgcagccattgcaagagagctgctgctg
agcgggacgtcacccaccgctgaggccctgatcctgaaggggaaagcacctgctttggcc
tgtggttccattcagccttcccagcagctggagtatttagcccatattcaaggcttccag
gtgcaatactcggatcggcaaactgacaaagagttcatgacctacctgaccctctcacct
gtgcagatgactttccacggcattgggagctccattccagctagccatgaccaggctgct
cttagtgccttgaaacagctgtcagaacaaggactggacccagtggatggaccaatcgag
gtggaaaatggatcatgtgacatgtatgtacacacagagccacaagctaaacgtctggcc
gagaggacagacagcaaaccgactaactcaggcaccactgctcaggactgcaaggattca
aaggccgtcgtctag
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