KEGG   Megalobrama amblycephala (Wuchang bream): 125258678
Entry
125258678         CDS       T08212                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mamb03041]
    125258678 (smu1a)
Spliceosome [BR:mamb03041]
 Complex B
  Other components
   Complex B specific factors
    125258678 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_EML NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_BBS7 WD40_RFWD3 Beta-prop_DCAF12 DUF7165 TFIIIC_delta Beta-prop_IP5PC_F Beta-prop_WDR75_2nd VPS8_N LisH Beta-prop_NOL10_N zf_topless LisH_PAC1 TolB_like LisH_WDR26
Other DBs
NCBI-GeneID: 125258678
NCBI-ProteinID: XP_048031598
LinkDB
Position
LG23:26121068..26129115
AA seq 513 aa
MSIEIESADVIRLIMQYLKENNLHKTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD
GHHAISASSDGTVKIWNVKTTECTSTFKSLGTSAGTDITVNNVIQLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaatagagtctgcagacgtgattcgtctgattatgcagtacctgaaggaa
aacaacctgcataagactttagtgacactccaggaggagacgacagtgtctctcaacaca
gtggacagtattgagagttttgtagccgatatcaatagcggtcactgggacactgtactt
caggctatacagtcccttaaactccctgacaagaccctcattgacctttacgaacaggtt
gttcttgagctgattgagctccgagagttgggagctgccagatctttgttgaggcagacg
gaccccatgattatgctcaaacaaacccaacctgagcgatatatccacctggagaacctt
ctggctcgctcatactttgaccccagagaggcctatcctgatggcagcagtaaggagaaa
cgcagagcagctatagcacaggctcttgctggtgaggtcagtgtagtaccgccgtcacgt
ctgatggctctgcttggacagtctctgaagtggcagcagcatcagggacttctgcctcct
ggtatgaccattgatttgttcagaggtaaagcagctgtgaaggatgtagaggaggagcga
tttcccacacagctggccagacacatcaagtttggtcagaagtctcatgttgagtgctca
cgcttctctcctgatggccaatatctggtcactggatccgtggatggatttattgaagta
tggaactttactactggaaaaatcagaaaggatctgaagtatcaggctcaggacaacttc
atgatgatggatgatgcggtgctgtgcatgtctttcagtcgggacactgagatgttggcc
acaggagcccaagatggcaagattaaggtgtggaagattcagagcggtcagtgtctgcgg
cggtatgagcgcgctcacagtaaaggtgtcacctgtctcagcttcagtaaagacagcact
cagattctctctgcttcctttgaccagactatcagaattcatgggttaaaatcaggcaag
tgtttgaaggagttcagaggtcattcttcatttgtaaatgaagccacgcttactcctgat
gggcatcatgccattagcgcctcatctgatggaactgtgaagatctggaatgtgaagacc
acagaatgcaccagcacatttaaatctctaggcacctctgcgggaacagacatcactgtt
aacaacgtgatccagctccccaaaaatccagagcattttgttgtgtgtaaccgatccaac
actgttgtcatcatgaacatgcaaggccagattgtgaggagtttcagctctggtaagaga
gaaggaggtgattttgtgtgctgtactctgtctccacgtggagagtggatctactgtgtc
ggagaggactttgtgctttactgtttcagcacagtcacgggcaaactagagagaaccctg
accgttcatgagaaggatgtcatcggtatcgcccaccacccacaccagaatttaatcgcc
acatacagtgaggatgggctcctcaaactctggaagccataa

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