Megalobrama amblycephala (Wuchang bream): 125258693
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Entry
125258693 CDS
T08212
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125258693 (rnf20)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125258693 (rnf20)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
125258693 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
Bacillus_HBL
BRE1
zf-RING_5
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
125258693
NCBI-ProteinID:
XP_048031624
LinkDB
All DBs
Position
LG23:complement(20836562..20853586)
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AA seq
1020 aa
AA seq
DB search
MSGQKRPSDPSSSATLGAPPEKKKGGEDGEGMSTGSGGSTAVETVIKLGGGANLEEQDIK
ALQIKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDENVRLIVH
RYDQSGSEPVESQPPEGRSLKPGTPEPDGDSNQERAKDRGQQGEAASSFLATLASSSSEE
IDAELQERVESSCKQASRVVEIYENLKNTVDQLKKDVESGTDGSLWDAAVRLNTLLTNEN
ERLRQLTNSLQQKHSHMTSESRSLGRAANRADNRISELQGLIEELQWDMEKIRRRENRLN
AHLAEVLERVNSKGYKVCGEASSVCGTITINKRKFEEMDSELEENRELAENRLSELQKLQ
QDLQTVYQENNNMKVELLSRAEEVARESAEYRCLQSQFSVLYNESLVLKSQLDETKARLN
TTRTARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAV
SSRSFSGPINREMRHLISTLQTHNQQMKGEVVKYKLRLREAQQELNQLRAAKGNAAVQSQ
SSTEMDVKEETASPLTPALTGDVTVKTEPDSGSATPSTTGATVKTEPGTDTEAAVKEEEK
EKEKEKEKEKDKEKEKEQRERERVTRGSTGGVVVKEEREKASTSNSQSEDLSVERCAMIG
GPKRKEVEQLKIVRVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSEAEE
LRQRLRELEERERREGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTG
QAFEDMQEQNIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVD
AQLQVVRKLEEKERLLQGTISAAERELGLRTQALEMNKRKAQESVLLSEEVRTQLEGVQQ
RLSAVREEVIENSISREKESFNARRAQEDISKLRRKIEKAKKPAENIRNGDEILNEEINE
YKARLTCPCCNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtcagaagcgccccagtgatccaagcagctctgccaccctcggtgctcctcca
gagaagaagaagggaggtgaggatggagagggtatgagcactggatctggaggaagcact
gctgtagaaaccgtcatcaagctgggaggaggagccaacctggaagaacaagatatcaaa
gctctgcagatcaaaaacaggaagttgggagaggcactagaccaaagacaggtgattgag
gatgaactgagggagagagttgagaggttggagactcgtcaggcgacagatgacgcaagt
ttgttgattctaaacagatactggaaccagtttgatgaaaatgtgcggttaattgtgcat
cgctatgaccaatcagggagtgagcccgtggaaagccaaccgcctgaagggcgtagctta
aaacctggaacaccagaaccagatggagactcaaaccaggagcgagcaaaagacagaggt
caacagggcgaggcagcaagctcttttctggccacgctggccagcagcagcagtgaggag
atagacgcagagctgcaggagcgagtggagtccagctgcaaacaggccagccgcgtggta
gaaatctatgagaacctgaagaacacggttgatcaactaaagaaggatgtggagtctgga
acagatggcagtctctgggatgccgctgtccgcctcaacacccttctgaccaatgagaat
gaacgtctccgccaattgaccaacagccttcaacagaagcatagtcacatgaccagtgag
tctcgttctttgggccgtgcggctaatcgtgctgataacaggatcagtgagctgcaggga
cttattgaggagctgcagtgggacatggagaaaattagacggagggagaatcgtctcaat
gcacacctcgcagaggtgctggaaagggtgaacagtaaaggttataaggtgtgtggcgaa
gcaagcagtgtatgtggaaccatcacgatcaacaaaagaaagtttgaggagatggacagt
gagttggaggagaacagggagctggcggagaatcggctcagtgagctccagaaactccag
caggacctgcagacagtttaccaggagaacaataacatgaaggttgagttgttgtccagg
gctgaggaggtggccagggagagtgctgagtatcgctgtctgcagtctcagttctcagtg
ctctataatgaatctctggtgctgaaatctcagctggacgagaccaaagcacggctcaac
acgaccaggaccgcccgcctgcggcagctggaccacatggagaatgacgaggtatctttg
cagcgtaaggtccgtactgaagtgattcagttggaagacacgttagcacaggtgcgcaag
gagtatgagatgctcaggatcgaatttgagcagacattagctgctaatgaacaagcagtc
tcctctcgttctttctcaggtcctataaaccgtgagatgagacatttgatcagtacgctg
cagactcataaccagcagatgaagggagaggtggttaaatataaactcagactgagagag
gctcagcaagagctcaaccagctccgtgctgccaaaggtaatgctgctgtccaatcacag
tccagcacagagatggatgtgaaggaagagaccgcctccccgcttacacctgccctgacg
ggtgacgttactgtgaagacagaaccagatagcggctccgccacacccagcacaactggt
gcaactgttaagactgaaccgggtacggacacggaggctgcggtgaaagaggaggaaaaa
gaaaaggaaaaagaaaaggagaaagaaaaagacaaggaaaaagagaaggaacagagagaa
agagagagggtgactcgtgggagtactggaggcgtagtggtgaaagaagaaagggagaaa
gccagcaccagcaacagccaatcagaagacctatcagttgaacgctgtgctatgattgga
ggaccaaaacgcaaggaggtggagcagctgaaaatagtgcgggtggagctcaagaaagcc
caagagtcccagagggagatgaagttgttgttggacatgtaccgctcagcaccgaaagaa
cagagagataaagtacagctgatggcagcggagaagaaggcaaagtctgaggctgaggag
ctccggcagcgattgcgagagctggaggagagagagaggagggaaggaaagaagatggct
gatgaagaggccctgagaaagatccgctcagtggaggagcagatcgatatactcaataag
aaactctctcttgctaagcaggaggaagatgctttgctgagtgaaatggatgttactggt
caggcttttgaagacatgcaggagcagaacatccgtctgatgcagcagctcagagagaaa
gatgatgccaacttcaaactcatgagcgaacgcatcaaatccaaccagatccataaactc
ctcaaggaagagaaagaggagctagctgaccagctgctcacacttaaaacacaggtggat
gctcagctgcaggtggttcggaagctagaggagaaagagcgtctgctgcagggcaccatc
agcgctgcagagagggagctgggtcttcgcacacaggcattagaaatgaacaaacgcaag
gcgcaggagtcagtgctgctatcagaggaggtgcgcactcagctggagggggtgcagcag
aggttgagtgctgtcagagaggaggtgattgagaacagcatttctcgagagaaagagtct
ttcaatgcccgacgtgcacaggaggatatttccaaactgcgcaggaagatagagaaggcc
aagaaacctgcagagaacattcgaaatggagatgagatcctgaatgaagaaataaacgaa
tacaaggcccggttgacgtgtccatgctgcaattcacgtgtaaaggacgctgttttgaca
aaatgcttccacgttttctgttttgagtgcgtgaagacgcgctacgacacccgtcagaga
aagtgcccgaagtgcaatgctgcatttggtgccaatgatttccatcgcatctacattgga
tga
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