Megalobrama amblycephala (Wuchang bream): 125258746
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Entry
125258746 CDS
T08212
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125258746 (rlim)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125258746 (rlim)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125258746 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
SPT6_acidic
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
125258746
NCBI-ProteinID:
XP_048031714
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All DBs
Position
LG23:23080846..23105665
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AA seq
641 aa
AA seq
DB search
MEGQDNADQGSSDQSEIQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQVKDGPDLPSNGTTEERREGPGATEVEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNIAEQQTQTERLEGGQERADGPVSEP
ESLMETAEVVEEPVVDELAVIVEPELPVPSTLSLNREVNASAPPTSAPPPPSLAPPTLPP
VEQPRRGQIRARSRSPEQRRTRARTARGRSPLNLERLDGLPPTQHGLPSRHPEILPEPQV
EGSSRTRQLFLSRQSTVEMETQELGTAPDLPGTPQEREINAGEAGASGRRPPTIMLDLQV
RRVRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRIP
IRRISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDYPDSNREDNPPADLTDALGNPD
ASTGTAASEADSHLPGHGGSNQGGLEARTEEREVEGGLPGAAGPRENRGRQRAPISLDET
GSLPFLRLAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKL
RKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggcagcagtgatcagtctgaaatacagcgccga
agacagctggaccgtctggacagagaagaggccttctaccagtttgtcaacaatcttagt
gaggaagactacaggctcatgagagacaacaatctgcttggcacacctggtgaaattaca
gcagatgaacttttgagccgccttcggcaggtaaaggatggccctgatttaccaagcaat
ggcacaactgaggaaagaagggaggggcctggtgcaacagaggtggagggaactgaggaa
aatcccagtggggagacccttcttgattggctcaacacagtacgacagacggggaataca
acaaggagcggttaccggggtaaccagtcatggcgggctgtgagccaaaccaatcccaac
agtggcgatttccgtttcagtttggagatcaatgtcaatcgcaacattgctgaacagcaa
acgcagacagaaaggctggaggggggccaggaaagagcagatggccctgtgtctgagccg
gagagtctcatggagactgcagaggtggttgaggaaccagtggtagacgagctggctgtt
atagtagagccagagcttccagttcctagcaccctgtctctaaacagggaagttaatgct
tcagctcccccaacttcagctccccctcccccatctttagctcccccaaccttgcctcca
gtggagcaaccacgtaggggtcaaataagagctcgcagtagaagcccagagcagcgtcgg
acaagggctcgtactgcaagaggtcgttcaccgctcaaccttgaaagattggatggactt
ccacctactcagcatggcctaccttctcgacatcctgagatccttcctgagccccaggta
gagggaagctcaaggactcggcaattgtttttgtccaggcagagcactgtggaaatggaa
actcaagaattgggaacagcacctgacttacctggaacaccacaggaaagagagataaat
gctggagaggcaggagcctcaggtcgtcgtcctccaaccataatgctggatttgcaggta
cgtagggtgcgtcccggagagtaccgccagagagacagcattgctaaccgcacaaggtct
cgttcgcagacgtccaataacactttattatatgagactgagcgtggaggtttccgtcgg
actttctcccgctctgagcgggctggagtgagaacatacgtcagtactatccgcattccc
attcggaggatctcagatgctggacttggtgaagccacttctttggctctgcagtctatg
attcgtcagatcatgactggtttcggtgaacttagctactttatggactcggactatcca
gactcgaaccgtgaagacaacccaccagcagaccttactgatgcactgggtaaccctgat
gcttctactggaactgctgcaagtgaagctgattcccatcttcctgggcatggaggctcg
aaccagggtggtttagaggcacggacagaggaaagggaagtggaaggtggactgcctggt
gctgctggtcctcgggaaaacagaggaagacaacgggctcccatcagcctggatgaaact
ggatctctgccctttctgcgacttgcgcacttcttcttgctcaacgaggaagatgatgac
caacccagaggtctaaccaaagagcagattgacaacctatccatgcgaaactttggggaa
agcgatgcactcaagacctgcagtgtctgcattacagagtatgctgaaggcaacaaattg
cggaagctgccctgctctcatgagtaccatgtgcactgtatcgaccgctggctttcagag
aactcaacctgccctatttgccgcagggcggttcttgtttccaccaaccgcgagagtgtt
gtttag
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