Megalobrama amblycephala (Wuchang bream): 125258820
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Entry
125258820 CDS
T08212
Symbol
slit3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mamb00536
]
125258820 (slit3)
Glycosaminoglycan binding proteins [BR:
mamb00536
]
Heparan sulfate / Heparin
Axon guidance molecules
125258820 (slit3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
hEGF
LRRNT
EGF_TEN
LRR_9
Laminin_G_1
LRRCT
LRR_14
LRR_EndoS
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
125258820
NCBI-ProteinID:
XP_048031891
LinkDB
All DBs
Position
LG23:complement(4355172..4571800)
Genome browser
AA seq
1519 aa
AA seq
DB search
MMRWVKYWGTVAVLCGLLCCAVNGCPHKCSCSGSHVDCQGQGFRTVPRGIPRNAERLDLD
RNNITRITKVDFTGLKNLRVLHLENNQISVIERGAFQELRQLERIRLNRNRLQVLPELLF
QSTPKLGRLDLSENQIQAIPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLN
NNNITLIPLSSFNHMPKLRTLRLHSNNLHCDCHLSWLSDWLRQRRGLAPFTQCMAPAHMR
GLNVPDVQKREFVCTGPTQSEPRSCAPQVSVCPADCTCNNNIVDCRRKGLTEIPANLPEG
IVEIRLEQNMIKSIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIT
EIPKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFTPLRA
IKTLHLAQNPFMCDCHLKWLADYLFDNPIETSGARCSHPRRLANKRISQVKGKKFRCTGA
EDYRSRLSGECFQDLVCPERCRCEGTVVDCSNLKLTKIPPHLPEHTTDLRLNDNEIPILE
ATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQTVSGRMFKGLSGLK
TLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSNPYVCD
CHLAWLGLWLKKTRVVSGNPRCQKPAFLKEIPIQDVAMPDFSCDGTEENICLPSAPRCPD
SCTCSDTVVRCSNRGLRSLPKGIPKDTTELYLEGNLLTSVPKELPNLKQLTLLDLSNNSI
SLLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLSTIPEGAFSHLT
SLSHLALGANPLYCDCELRWLSQWVKAGFKEPGIARCTGPPDMADRLLLTTPLNRFQCKG
PADLNLMSKCAPCLAAPCQNNGTCVSDVTGSYHCTCPFGYKGRNCEIPINACISLPCVNG
GTCHLTPGLDGQYSCVCPPGYEGQQCELNPDDCEDNDCENNSTCVDGINNYTCVCPPNYR
GDLCEEVVDPCLPGFDPCQHDSKCVPLSKGYRCECLPGYVGQQCEQDYNDCLENKCQHGA
ECVDAINGYTCVCREGFSGLFCENPPPMVLLQKTSPCDQSDCQNGAQCLVMEGEPMCRCL
PGFFGIKCHKMVTVHFLGKDTYVELSGTKIRPPMHISLQVATDKDNGILLYKEDHDPLAL
ELYQGHIRLIYDVAKYPPTTVYSVESVNDGLFHMVEVLIQNQTLSLVVDKGAPKSLGKLP
RPPAVDHNTHLYIGGVPSLIDTVGLRPGPDRPFQSFNGCIHDVRLNGELQDLGGGLAGLK
GVLPGCHSCGVCAQGACRQRGEAGVTCECPTGHSGPLCEQMTSQSPCQSSRCVHGVCVPA
GSSYSCSCADGYSGQYCDRRDESAACRGQHCVHGECRATESGEPVCHCQPGYSGPTCETE
LTCQGEMVRELLKRHMGHKNCTSTSKIPRVECPHACHSGLCCAPTKSRRRKVSFRCSDGS
SFSEEMETTVECGCTKCPL
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggtgggtgaagtattgggggacagtggctgtgctgtgcgggctgctgtgctgt
gctgtgaatggatgcccgcataagtgcagttgttcgggctctcatgtggattgtcagggt
caaggcttcaggacggtgcccaggggaatcccgaggaacgccgagaggctggatctggac
aggaataacatcacccggatcaccaaagtggacttcactggcctcaagaacctacgcgtg
ctacatctggagaacaatcaaataagtgtgatcgaaagaggagcgtttcaggaactcaga
cagcttgagagaatccgcctgaaccggaaccggctgcaggtcctgccggagctgctgttc
caatccacacccaagttgggccgcctggacctgagcgagaatcagattcaggctattcca
cgtaaggctttccgagggatcaccaccgtcaagaacctgcaactggacagcaaccacatc
agctgcatcgaagatggagccttccgagccctgcgcgatttggagatactcactctcaac
aacaacaacatcaccctcatcccactgtcaagcttcaaccacatgcccaagctgcggaca
cttcgcctgcactccaacaacctgcactgcgactgccacctgtcctggctctctgattgg
ctgcggcagagaagggggctggcccctttcacacagtgcatggcccccgcccatatgaga
ggtctcaatgtccctgatgttcaaaagagagaatttgtgtgcacaggtcctactcagtcg
gagccaaggtcatgtgctccccaggtgtccgtctgccctgccgactgcacctgcaacaac
aacatcgtagactgccgtagaaaaggcctgacggagattcctgccaacctgcctgaagga
attgtggaaatccgtctggagcagaacatgatcaagagcatcccagcaggagcgttctcc
acatacaagaagctaaagagaatagacctgagcaagaatcagatatccgagattgcagaa
gatgcgtttagtggcctgcgctcgctcacttcactggtcctgtatggaaataaaatcaca
gagatcccaaagggactgtttgatggcctggtctccctccaactgctactcctgaacgcc
aacaagatcaactgtcttcgggtgaacactttcaaagacctgcagaacctcaacctgctg
tctctctacgacaacaagcttcagaccatcagcaaaggcctgttcacccctctgcgtgcc
atcaaaacactacacctcgctcagaatcccttcatgtgtgactgccatctgaagtggctg
gccgactacctgtttgacaatccaatcgagaccagcggagctcgatgcagccacccgcgc
cgcctcgccaacaaacgcatcagccaggtcaagggcaagaagttccgctgcacaggtgcg
gaggactaccgcagtcgtctcagcggagagtgtttccaggacctggtttgtcccgagcgc
tgtcggtgtgaaggaacggtggtggactgctcgaacctcaaactcaccaagataccccct
cacctgcctgagcacaccactgacctacggctgaacgacaatgaaatccccatcctagag
gctacaggagccttcaagaagctcccaaacctgcgcaagataaacttgagtaataataaa
ctccgggacatccgtgagggggcatttgatggggccggaggtgttttggagctcctgttg
actggaaacaagctccaaacagtgagcggacggatgttcaagggtttgagcggcctcaaa
acactgatgctgaggagtaatcagatcagctgtgtggataacgccaccttcactggcctg
agctccgtgcgcctgctttccctctatgataaccggatctccactatcgcccctggagct
ttcaacaccctgcattccctctccaccattaacctgctgtctaatccctacgtgtgtgac
tgtcacttagcctggctgggactgtggcttaagaagaccagggtggttagtggaaaccca
cgctgccagaaacctgccttcctgaaggagatccctatacaggatgtagccatgcctgat
ttctcctgtgacggtacggaagagaatatctgtctgccatcggcccctcgctgtccggat
tcctgcacatgctcggacacagtggtgcgctgtagtaaccgagggctgcgttccctgcct
aagggcatccctaaagatacaaccgaactatacttggaaggaaacctcctcacgtccgtg
cccaaagagcttcctaatctgaaacaactcactctgctagacctcagtaataacagcatt
agtcttcttgcccctctcaccttcagcaacatgacgcagctcgccacccttatcctgagc
tataatcagattcgctgtgtcccggttcatgcatttgatggcttgcgttctctccgcctg
ctaaccctccacggaaatgacctttcaactattccggagggagccttcagccacttgaca
tctctgtctcatctggctctaggtgcgaaccccctatactgtgactgcgagctgcgctgg
ttgtctcagtgggtgaaggctgggtttaaagagcctggcatcgcccgctgcactggacca
cccgacatggcggaccgactgctgcttactacgcccctcaatcgcttccagtgcaaaggt
ccagcagatttgaatctgatgtccaagtgcgccccctgtctggcggctccctgtcagaac
aacggcacatgtgtgagtgatgtcacaggctcctaccactgcacctgcccttttggctac
aagggtcgtaactgtgagattcccattaacgcctgcatcagcctgccgtgtgttaatgga
ggcacgtgtcacctcacacctggactggacggacagtacagctgtgtgtgtccacctggg
tatgagggccagcagtgtgagctgaatcctgatgactgtgaagacaacgactgtgagaat
aactccacctgtgtggacggcatcaacaactacacctgtgtctgcccccctaactacaga
ggtgatctgtgtgaggaggtggttgacccctgtctgcctggctttgacccctgccaacac
gactccaagtgtgttcccctcagtaagggctacagatgtgaatgtttgccaggatatgtt
ggccaacagtgtgagcaggattacaatgactgtctggagaacaaatgccagcatggggcg
gagtgtgtcgacgccatcaatggatacacatgtgtgtgcagggaggggttcagcgggttg
ttctgtgagaatcctccaccaatggtattgctccaaaagacgagtccatgtgatcaatct
gactgtcaaaacggagcccagtgtttggtcatggagggagagcccatgtgtcgttgtcta
cctggcttcttcggcatcaagtgccataaaatggtcacggtgcacttcctcggcaaagac
acctacgtagagctctccggcaccaagatccgaccacccatgcacatatcccttcaggtg
gccacagataaggacaatggcattctgttgtataaagaggaccatgacccactcgcccta
gagctgtaccagggacacattcgtttgatctacgatgttgccaagtaccccccaaccaca
gtgtacagtgtggagtccgtgaatgatggtcttttccacatggtggaggtgctgatccag
aatcagaccctgagtttggtggtggataaaggggcaccaaaaagcctgggcaaactgccc
cgccctcctgctgtggaccacaacacacatctctatataggcggtgttccctctctgatt
gacacggtaggcctgcgaccgggtccagaccgtccattccagtcctttaacggctgtatt
catgacgtacggctcaacggggaactccaagacctcggcggtggactggcagggctgaag
ggcgtcttgccgggctgtcactcctgcggcgtttgcgctcagggggcctgcagacagaga
ggagaggcaggcgtgacctgcgagtgtcccaccggccacagcggcccgctgtgtgaacag
atgacctcccagagcccctgtcagagcagcaggtgtgtgcatggtgtgtgtgtgcctgca
ggctcctcgtacagctgctcatgtgcagatggatactctggccagtactgtgacaggcgg
gacgagtccgccgcatgcagggggcagcactgtgtgcacggagagtgcagagcgacggag
agcggagagccggtttgccactgccagcctgggtacagcgggccgacctgtgaaacagag
ctgacgtgccaaggagagatggttcgcgagctgctcaagcgtcacatgggtcataaaaac
tgcacctccaccagtaaaatcccgcgggtggagtgtcctcacgcctgccactcgggcctg
tgctgcgcccccaccaagagccggagacggaaggtcagcttcagatgctccgacggatcg
tccttttccgaggagatggagaccaccgtggagtgcggctgcacaaagtgcccattgtaa
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