Megalobrama amblycephala (Wuchang bream): 125258824
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Entry
125258824 CDS
T08212
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125258824 (pcdh19)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125258824 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
125258824
NCBI-ProteinID:
XP_048031914
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Position
LG23:complement(14678005..14735907)
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AA seq
1094 aa
AA seq
DB search
MHSKDMDFVQMLLCFLLCWTGVSAVFNLKYTVEEELRPGTKIANVTADAKVAGFALGNRQ
PYLRVISNSEPRWVNLSPAGLLITKQKIDRDAVCRQTPKCFISLEVMSNSMEICVIKIEI
IDVNDNAPRFPTNHIDIEISENAAPGTRFPLEGASDPDSGSNGIQTYTITPNDIFGLEIK
TRGDGSKIAELVVEKTLDRETQSRYTFELTAEDGGDPPKSGTVQLNIKVIDSNDNNPVFD
EPVYTVNVLENSPINTLVIDLNATDPDEGTNGEVVYSFINFVSNLTKQMFKIDPKTGVIT
VNGVLDHEELHVHEIDVQAKDLGPNSIPAHCKVIVNVIDINDNAPEIKLLSENSEMVEVS
ENAPLGYVIALVRVSDNDSGANGKVQCRLQGNVPFRLNEFESFSTLLVDGRLDREQRDMY
NLTILAEDSGYPPLRSSKSFAVKVTDENDNPPYFTKPHYQAMVLENNVPGAFLLAVSARD
PDLGMNGTVSYEIIKSEVRGMSVESYVTVNSNGEIYGVRAFNHEDTRTFEFKVSAKDGGD
PPLTSNATVRIVVLDVNDNTPVMTTPPLVNGTAEVSIPKNAGVGYLVTQIKADDYDEGEN
GRLTYSISEGDMAYFEIDQINGEVRTTKTFGENAKPSYQITVVAHDHGQTSLSASAYIVI
YLSPDLNAQEQIGPVNLSLIFIIALGSIAVILFVTMIFVAVKCKRDNKEIRTYNCSFLYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTL
PLGCRRSESTFLNVENQNSRNAAPNHGYHHTFTGQGPQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKSTSTFKDMEGNSLKDSGHEESDQTDSEHDVQRGHYADTAVNDVLNMTVPP
NNSQLPDQDQSEGFHCQDECRILGHSDRCWMPRVPMPAKAKSPEHGRNVIALSIEATTVD
VPHYEDCGTTKRTFATFGKDGPDEERAEQRGRRQTAEPAVCSPKTNGTVREAGNGREAVS
PITSPVHLKSPQSKPPSAYNTLKCRDVERIANHSLLRQPEGKDSEPAMREINTLLQDGRE
KESPGSKRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcattccaaggacatggatttcgtacaaatgttattgtgctttctcttgtgctggact
ggagtcagtgccgttttcaatttgaaatacaccgtggaagaagagctgcgtccaggcaca
aagatagccaatgtgacggcggacgcaaaagttgcgggttttgcactgggaaaccgacag
ccttatttacgggttatctccaattccgagccgcgatgggttaatctgagccccgccgga
ctgctcatcacaaagcaaaaaatcgatcgggacgctgtttgccgacagacaccgaagtgt
tttatttcgttggaggtgatgtcgaactcgatggagatctgcgtgattaaaattgagatt
atcgacgtaaacgacaacgcgccccgcttccccaccaaccacattgacatagaaatctcg
gaaaatgccgctcccggtaccagatttcccctagagggggcaagcgatccggactcgggg
agcaacggcatccagacgtacacaattacccctaatgatattttcggtcttgagattaag
acgaggggagacgggtccaaaatcgcagaacttgtggtggaaaagactttagacagagag
acgcagtctcgttacacgtttgaactcacagcggaggatggtggagaccccccaaagtct
gggactgtgcaacttaacatcaaagtcattgactccaacgataacaaccccgttttcgat
gagccagtatacactgtaaacgtgctggagaattctcccattaacacgctagtcatagac
ttgaacgccacggacccagacgagggaaccaatggcgaggtggtctactcgttcataaac
ttcgtctccaacctgaccaaacaaatgtttaaaatcgaccccaaaacaggcgtaatcacc
gtgaacggcgttttggaccacgaggaattgcacgtccacgaaattgatgtacaagccaaa
gatctgggtccaaattcaatccctgcccactgcaaagtgattgttaatgtaatcgacata
aacgacaacgcgccagaaatcaaactgttgtcagaaaacagcgagatggtagaggtgagc
gaaaacgctcctctcggatatgtaatagctctggtgagagtctcagataacgattcggga
gcgaatggaaaagtgcagtgcagactgcaaggcaatgtgccttttagactcaacgagttt
gagagcttttccaccttacttgttgatggccgtctggatagggagcagagagacatgtac
aatttaaccattctagccgaggacagcggatatcccccgctgagaagctcgaaatctttt
gcagtgaaagtgacggatgaaaacgacaatcccccgtacttcaccaagccacattatcaa
gccatggtgctagaaaataacgtcccaggtgcgtttctgctggcggtgtccgccagggac
cctgacctgggcatgaacggcactgtgtcgtatgaaatcatcaaatcggaggtgcggggc
atgtctgtggaatcttacgttactgtgaactcaaacggcgaaatatacggcgttagggct
tttaatcacgaagatacgcggacctttgagtttaaagtctctgcgaaggatgggggagat
ccgcctttgaccagcaacgccaccgtgcgcattgttgtactggatgtaaatgacaacaca
cctgtaatgaccaccccgcccctggtgaatggcaccgcggaggtgtcaattcctaaaaat
gctggagttggttatttggttacacaaataaaagctgatgattacgacgagggggaaaat
ggaaggttaacgtattcgatttcagaaggagacatggcatactttgaaatagaccagata
aacggcgaggtgcgaaccacaaagacgtttggggagaacgcgaaaccatcctatcaaata
actgtggtggcgcacgaccacggccaaacttctctatctgcctctgcctatattgtcatt
tatctctcccctgatctcaatgcacaggagcaaatcggacccgtcaacctctctctcatt
ttcatcattgccctgggttctattgcagtcatcctgtttgtcacaatgatctttgtggca
gtcaagtgcaaaagggataacaaggaaatccgaacatacaactgcagtttcttgtacctg
cgcagggtggcggagtactcctacgggaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccggctggtgccgcgggacgtggaggagactgacaagatgaatgtg
gtgagttgttcgtctctcacctcttcgctcaactacttcgactaccaccagcagactctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactccagg
aatgctgcacccaaccatggctaccaccataccttcacagggcagggccctcagcagcct
gacctcatcatcaacggcatgccgctgcctgagacggagaattattccattgactccagt
tatgtaaacagcagagcacacctaattaaaagcacgtcaacattcaaggacatggaagga
aacagtctgaaggacagcgggcatgaggagagcgaccaaaccgacagcgaacatgatgtt
cagagagggcactacgctgacacggctgtcaacgatgtactgaatatgaccgtacccccc
aacaactcgcagctacctgaccaagatcagtcagagggtttccactgccaagacgaatgt
cgtatcctgggccactctgatcgctgctggatgccccgggtgccgatgccagcgaaagcg
aagtctcctgaacacggccgcaatgtcatcgctctgtccatcgaggccacaaccgtggac
gtacctcattatgaggactgtggcaccaccaaaaggacttttgccacctttggcaaagac
gggccggacgaagagcgggctgaacagaggggcaggcgacaaacggcagagccggccgtc
tgcagccccaagaccaacggcacagttcgcgaggcgggaaacggccgggaggcagttagc
cccatcacctcccctgtgcacctgaagagcccccagtccaagccaccctccgcttacaac
acgctgaaatgccgggacgtagagcgcatagccaaccacagcctgctgcgacagccggag
gggaaagacagtgagccggctatgcgggagatcaacacgctcttgcaggacggccgtgag
aaggaatcccccggcagcaagcggctgaaggacatcgtgctttaa
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