Megalobrama amblycephala (Wuchang bream): 125258855
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Entry
125258855 CDS
T08212
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125258855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mamb04131
]
125258855
Membrane trafficking [BR:
mamb04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
125258855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
125258855
NCBI-ProteinID:
XP_048031981
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Position
LG23:17381169..17395327
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AA seq
1355 aa
AA seq
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MPLISLDDDDQRWVPTHVNVTVLRARGLRTKGKQGSRYVYTIIQVGKEKYTTGLVEKAEE
PQWNEECSFELPPGLLEAGGTSAYPPGSSNLVLTVMHRVLIGLDVFLGQIIVPLDKVFQE
GMCPRNEWLKLHSKAGRKEKERGELQVNVQFTRNNMTASMYDLTVTDKPRSAFGKLKDRV
TGRKRGDVESSSAILPGRYAALSGSVGPPFAGDGGPDEPGEEEVVDEHRSKVKDFFKGKL
RKNSDTRSCSSLASDSSMASSAGEPFVPIELSRTPVYSSRVLEPFRMDTEGGIKVMTHKR
AHSDEASKITGVPHPSPAVENLKGQNTALSKSTLCINGSHIYSSEPVSPKSPSTNPAKRS
LLEKCAPLSRSLQNLTRRGEDSQKSDGRRWSIEKSKKEDGEMDGAQSQTQGAATPEGKPV
QAAGPVEVVDKGKKLRKTLFSSGRSDSLPAKPEQSQVSAPLEGRRRGWFGSGDSQNKPRL
GVSPKVESSSDTPCQIPCSPSQPPCSLPLSCTTGSVSPPSGNHTNPFTHSSSTPPSISPS
NPFLTRLQQNPFFEDLIAEEALTSPTAGYCSLNSSLYHYPVGSGPLRNGVPNKMSAIKRD
RPRSMSRQRSLPTIMPETPEANSTINPNHSLSERGGEWDDFEEFATSRLKSPNGTPTRPP
SAPFLSQVPNTNQMMFVNDKAIGLRVDEVDMGISKPWDLPPLPPRRPMRTQVITMDSWLD
RAQELAVQKEACFLSQTDFASLQHVRDGDLKRNSQVLCSDKESHHISSVGHNKMEAELHS
GIKLNQFMVGEATGQDFPTNNSADASPNGFGEDALGSSECENTVREPETLCFPSDWETTV
AESLCSSPQAQPKHDSELSCEVKNSNEQQQKTKTNDIGLLTLSPRDSNNNTDITSEFAFI
DSESSPSELQPPFEMNKEGKASKDCSHLHSGNGSSLPRCSPGLPEDILCRMTSELEMFSP
KNTHNDIASHLSNSQNNNHCSSPFERSCEGLEGQNVNPCEHQNTASTLNCDSHNVADVLL
REEIAVITQTCLSNDNTVTTQIKPEMVKDSCVLLTTHDDEELNVHLTDGNLNSEVCFSKD
NEVKGSCSTLDEQISFEDLHARVAPRNSRSPFTTEVRSARIRPRSTTSSPKTVSSANSLP
GSHNPASDLILHDFSPSPTPLAGTNSCLRLDPSLPANPPDKMPSMGSTCSSTAQSHVDAP
LSLSPEETQPANVLLPHEESSPHPVKPLTNTVVQGEKKPESRSVLEKLKSTINPGKSAPP
ITAEDETNQLALMEARAQYQNMTNMELISLLLQQEMDVKKQRAETEVQVALLEKREAELK
KMKVQVRDLEDYIDKLLVRIMEQTPTLLQVRARPK
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttataagcctggacgacgatgatcagagatgggtcccgacgcatgtcaacgtg
accgtccttcgcgcaaggggtctgcggacgaagggcaagcaaggcagccgctatgtttac
actataattcaggttggcaaggagaagtacaccaccggcctggtggagaaggctgaggag
ccgcagtggaacgaggagtgctcgtttgagctgccgcccgggctcctggaggcgggtggg
acgagcgcgtacccgcccgggagcagcaacctggtgctcaccgtgatgcatagagtgctg
atcgggctggacgtgtttctcgggcaaattattgttccactcgacaaagttttccaggaa
ggaatgtgtcctagaaatgagtggctcaagctgcactccaaggctggtcgaaaggagaag
gagcggggagagctgcaggtcaacgtccagttcacccgcaacaacatgactgctagtatg
tatgatttgaccgtaacggacaagcctcgttctgcatttgggaaactgaaggaccgcgtc
acaggaagaaagcgaggagacgtggagtcctcctctgccattttgcctggccgctatgcc
gccctatcagggtctgtaggtcctccgtttgccggagatggtggacccgatgagccaggc
gaggaagaggtggtcgatgaacaccggagcaaggtgaaagacttctttaaagggaaacta
cgcaagaattcagacacacggtcctgttcatcattggcttcggacagtagcatggcatcg
tctgctggggaaccattcgtcccaatagagctgtccagaacgcctgtctacagcagcaga
gtgttggagcccttccgaatggacactgaaggaggaataaaagtgatgacccacaagcgt
gcacacagcgacgaagccagtaagatcacaggtgttcctcatcctagccctgctgtggaa
aacctaaaaggtcagaacacagcgctctccaaatcaaccctctgcatcaacggtagccat
atctactcatccgagcctgtcagccccaagagtccaagcactaacccggccaagcgctcc
ctgctggagaaatgcgcacccctttctcgctctctccagaacctgacccggcgtggcgag
gactcgcagaagagcgacggtagacgctggtccattgaaaagagcaagaaggaggacggg
gagatggatggagctcagagtcagacccaaggggccgccactccagagggaaagccagtg
caggccgctggacctgtggaagtggtggataaagggaaaaagctgaggaaaactcttttt
tctagtggaagaagtgactctctcccagccaagccggagcagagccaggtttctgctcca
cttgagggcagacgcagaggatggtttggctcaggtgactcccagaacaagccaaggctg
ggagtctctcctaaggtagagagcagctcagacaccccctgtcagatcccttgctccccc
agtcagcccccatgctctcttcccctcagttgcactactggctcggtgtctccccctagt
ggcaatcacaccaacccattcacccactcttcctcaacacccccttccatctctccctcc
aacccgttcctcacacgactacagcaaaaccctttttttgaggatcttatagctgaggaa
gcactgacgtctccaactgctggttactgttctctcaattccagtctttatcattatcca
gtcggatccggtccccttcgtaatggagtgccgaacaaaatgtctgcaataaagcgggat
agacccaggagtatgtccaggcagaggtctcttccgaccattatgcctgagaccccagaa
gcaaactcaactattaatccgaaccactctctgtctgagaggggtggggaatgggatgat
tttgaggaatttgccaccagccgtctcaaatcaccaaatgggactccaactagacctccg
tcagcaccgtttctttcacaggtaccaaatacaaaccagatgatgtttgtaaacgataaa
gcaattggtttaagagttgatgaagttgatatgggtatttcaaagccatgggatctgcct
cctctaccaccacgtagacccatgaggacccaagtgatcaccatggacagctggttggat
agagcccaggagctggctgtgcagaaagaggcctgctttctctcccagactgactttgcc
tcccttcagcatgtgagagacggagacttgaagaggaactctcaagttttatgttcagat
aaagagtcgcatcacatttcttcagtagggcataacaagatggaagcagagttgcacagc
ggtatcaaactgaaccaattcatggttggggaagcaacagggcaagatttccctacaaac
aacagtgctgatgcttctccgaatggttttggtgaagatgcacttggaagctctgaatgc
gagaacacggtaagagaacctgaaacgctgtgttttccatctgattgggaaaccacagtg
gccgaatcactttgcagttcacctcaggcccaacccaaacacgattcagaattgtcctgt
gaagtaaagaactcgaatgagcaacaacaaaagactaaaaccaatgacatcggtttgttg
accctctccccaagggattcgaacaacaatacagatattacttcagagtttgctttcatt
gattctgaaagttcaccgtcggagttgcaaccaccttttgaaatgaataaagaaggtaaa
gcatccaaagattgttcacatttgcactctgggaatggttcctcacttcccaggtgctca
ccaggcttacctgaggatatattgtgcagaatgacatcagagttggagatgttttcacca
aagaacacccataatgatatcgcatcacatttgtctaactcacaaaacaataaccattgc
tcatcaccttttgagagatcttgtgaaggactggaaggacaaaatgtcaacccttgtgaa
caccaaaacactgcttcaactttaaactgtgactctcacaacgtggctgacgttctcctc
agagaagaaatcgctgtgatcactcaaacatgcttaagcaatgacaacactgtgacaact
caaatcaaaccagagatggtgaaggacagttgtgtcttgctcactacgcatgatgatgag
gagcttaatgttcatttaacagacggtaacctaaactccgaagtgtgcttctcaaaggac
aatgaggtcaagggatcttgttcgacattggatgaacaaatcagcttcgaggacttgcat
gctagagtagctccaagaaactccagaagcccatttacaacagaagtccgatcagcccgc
atcagaccacgctcaaccacaagctcacccaaaactgtctccagtgccaactcactccca
ggctctcataaccctgcatcagacctcattttgcatgatttttccccttcacccacccca
ttagctggtactaattcctgtctccgccttgacccttcccttccggcaaatcccccagac
aagatgcccagcatgggttccacatgctcctccacagcccagtcccacgttgatgcaccg
ctctccctctcacctgaggagacacagccagcaaacgtcctcctgccccatgaggagagc
agccctcacccagtgaagcccttgaccaacacagtggtgcagggagagaaaaaacctgaa
agccgctcagttctggaaaaactcaagtccaccatcaaccctggaaaatctgcgccacca
atcactgctgaggatgagacaaaccagttggctctgatggaggcccgggctcagtatcag
aacatgaccaacatggagctgatatctctgctgcttcagcaggaaatggatgtcaagaag
cagcgagctgaaaccgaggtacaggtggcgttattggagaaacgtgaggccgaactgaag
aagatgaaggttcaggtcagagacctggaggactacattgacaaactgctggtgcgcatc
atggaacagacgcccaccttgctgcaggtacgcgcaagaccaaaatga
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