Megalobrama amblycephala (Wuchang bream): 125258955
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Entry
125258955 CDS
T08212
Symbol
pcdh12
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125258955 (pcdh12)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125258955 (pcdh12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
125258955
NCBI-ProteinID:
XP_048032166
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All DBs
Position
LG23:1867735..1880563
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AA seq
1176 aa
AA seq
DB search
MLQVLLLLAALIECPPCYAHNMGTAPLIIQYRVWEEQPSGTRVGRLLDDLRERGVTGSLE
NFQVVQHVHAPPVTVASRDGTVSTLGRLDREELCSGTERCELAFNVLYRKNGAMHLLSVH
VEVMDLNDHSPVFPSLVQEVEISETASLRMRIPLDHAIDPDAGHNGLQTYSLSSNQHFAL
DVRTSGGAKQAELVVIKELDRELQPSLELVLTAWDKGNPPKSGSTKVIIIILDSNDNSPV
FEEAPPVIELAENTVLGTIVINLRATDPDQGANGEVEYSLSKHAPLEVQRLFSIHPKTGA
LTLQGHLDFEEKKVYEVDIQARDLGPNAIPSHHKLQVKLLDVNDNAPRIHITWTPPDSPF
ATVSEGAPNETFLALVIVSDADSGANGQVRVHVQSGSGPFRLKQIHGDNYMVVTNDTLDR
ERQMEYNLTLLAQDRGDPSLSCIKHMTVRVADENDNAPKFTKSHYRSVLKENNTPDFHFL
TVEAHDVDLDHSGRVSFSIKESNELGTPTAFFSVHPRSGAVTVQQTLDYEESHSYSFIVE
AVDQGFPPMTSSATVLVEIQDVNDNYPVIHEPPPKKGVAQLSVPVNVDKGEIVTELGDKS
LEDNFHKPRNYSSLNKPEGFLATTIRASDPDSGLNGRLSFGITDGNPSNIFFLDKTSGQL
YVNTSNATELIGRTFKLGIAVSDMGTPMLTTRTTLEVSFINLRDHLKNLSHDNQSKYSFT
MLLAICLGSTCLVLFLAIALAKTFCHPDKRDNRAYNCRQAESTYTRHPRRPQKHIHKTDI
QLVPALRGRKETPQEDEAAALSSTLPLVERTHQQGQFTLTPTLARMTQNQAHMEMDGNPP
LTQSKILRKPGSIEWNGTLPYNPGTPYRTLQKTRNPSSSSFANSQTSTLRRNKNDEVKPT
TMDPSQTIASVPSNQATLRRPKTTEKKGRMEESDHRQILRNLVRLSMAAFAENGSIELSS
ASPEVQQVSQLLSLLHQGQLQPRPNFRGNKYSHRTGRSGDRDADWLSTKDSGHGESEMGD
MDWETGRDSPVDHLYEEGLNNLLTSDDVFSDIPDPAWMARLSLPLTTDYHENLFVPDGPP
SPDALCPMASPDDSTSFSTFGKSPEKRGLGGSALMSEVSSLFEMLLTQKADGQSCPPADV
LYRLSAAYRRSLGLDAPAATRQPGQTPMMQYANPIP
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggttttgctccttctggctgctcttattgagtgtccaccctgttacgcccac
aatatgggcactgctcccctcattatccaatatcgcgtctgggaagaacagccctcaggg
acaagggtgggtcgcctcctggatgacctacgtgagcgtggggtgacagggtcactggaa
aacttccaggtcgtccagcatgtgcatgccccaccggtcacagttgcttcaagggatggt
accgtgtcaacactaggcaggctggaccgcgaggagctttgctcgggaacagaacgttgt
gaactggccttcaatgttctctacagaaagaatggtgctatgcatttactctcagttcat
gtggaggtgatggacctaaatgaccacagcccagtcttccccagtctagtgcaggaggtg
gagatctcggagacagcctcgctaagaatgcgcatccctctggaccatgctatagatcca
gatgcgggacataacggcctgcagacttactccctgtcttccaaccagcactttgctttg
gatgtccgtacctctggaggggccaagcaggctgaattagtggtcatcaaagaattggac
agggaattgcagccatctttagaactggttctgacagcatgggacaaaggaaacccacca
aaatcaggcagcactaaagttataatcataattcttgactccaatgacaatagccctgta
tttgaggaggccccaccagttattgagcttgcagagaacacagttcttgggaccattgtc
attaatctccgtgctacagaccctgatcaaggtgctaacggggaggttgagtactccctt
agtaaacatgccccactggaagtgcaacgactattcagcatccatcccaaaacaggtgct
ttgactttacaaggccatttagattttgaagaaaagaaggtttatgaggtagacatccaa
gctcgagatctggggcctaatgctatcccgtcccaccacaagttgcaggtcaaattgcta
gatgtcaacgataatgctccccggatacacataacatggactccacccgattcccctttc
gcaacggtctcagagggagcaccaaatgaaactttccttgctcttgtgattgtatctgat
gctgactctggggcaaatgggcaggtacgagtgcacgttcagagtggatctggccccttc
agactcaaacaaatccatggagacaattacatggtcgtaaccaatgatactctggaccgt
gagagacaaatggaatacaaccttactcttctagctcaagacagaggtgatccttccctg
tcctgcattaagcacatgactgtccgtgttgcggatgaaaatgataacgcaccaaagttc
accaaaagtcactaccggagtgtcctcaaagagaacaacacacctgactttcatttcttg
actgtggaggcgcatgatgttgacctggaccacagcggaagggtatcattctccattaaa
gagtcaaatgaactggggacaccaacagcatttttctctgtccaccccagaagtggggct
gttactgtccagcaaacattagactatgaggaatcccattcctactcgtttattgtggag
gctgtagatcaaggattcccaccaatgaccagtagtgcaacagtgctggttgagatacag
gacgttaatgacaattaccccgtaatccatgagccaccacccaagaagggagttgcacag
ctaagtgtcccagtgaatgtggacaaaggggagattgtgactgaacttggagataaatct
ctggaggataacttccacaaaccaagaaattactcttctctcaacaaacccgaaggtttt
ctggccactaccattcgggctagtgatccagattctggtctcaatggaagactcagtttt
ggaataacagatggcaacccttccaacatattttttctggacaaaacttctgggcagctc
tatgtgaacacatctaatgccacagaattgattggcagaacttttaagctgggcatagca
gtgtcagatatgggaacacctatgctaaccacaagaaccactttggaagtatctttcatc
aacttgcgtgaccacctgaagaacttgtctcatgataaccagtccaagtacagttttaca
atgcttttggcaatctgccttggatcaacctgcttggtattatttctagccattgctttg
gccaagacattctgtcatcctgacaaacgggacaaccgtgcttacaattgtagacaagct
gagtcaacctacacccgccacccaagacggcctcaaaagcacattcacaaaactgacatc
cagttggtaccagcgcttcgggggcgtaaagaaaccccacaagaagatgaagctgcggca
ttgtcatctacattacctttagtggaaagaacacatcaacagggccaatttacccttaca
ccaacccttgctcgcatgactcagaatcaagcccatatggaaatggatgggaacccacca
ctcactcaaagcaagatactcagaaagcctggaagcatagagtggaatggaacacttcct
tataacccaggaacaccatatcgaaccctgcaaaagaccaggaatccttcctcttcttct
ttcgcaaactcgcagaccagcacactcagaagaaacaaaaatgacgaagtcaagcccact
accatggacccctcacaaactatagcttcagttcccagtaatcaggccacattacggaga
ccaaagaccacagaaaaaaaaggaaggatggaagagtcagaccacaggcagatcctgagg
aacctcgttcggctctctatggcagcctttgcagagaacggttctattgaactgtcctct
gcctcacccgaggtgcaacaggtgtctcagcttctgtcacttttgcatcaaggacaactt
cagcctcgaccaaatttccgcggaaacaagtattctcacagaactggccggtctggggat
cgagatgctgattggctgagcactaaagacagcggtcatggcgagagtgaaatgggtgat
atggactgggaaactggcagagactcacctgtcgaccacttatatgaagaaggcctcaat
aatctcctgacatctgatgacgtgttctcagacattcctgatccagcatggatggctcgt
ctttctcttcctctgacaaccgactaccatgaaaacctgtttgtcccggacggaccgccg
tcccctgatgccctctgtcccatggccagtcctgatgattccacttccttctccacgttt
ggtaaaagcccagagaagcgcggtctgggcggcagcgctctgatgtcagaagtgagctct
ctgtttgagatgttgctgacgcagaaggccgatggccagtcgtgtcctccagctgacgtg
ctgtacagactctcggccgcgtacagacgctcgctcggcttagatgctcctgccgccaca
cgccaaccagggcaaactcccatgatgcagtatgccaaccctataccataa
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