Megalobrama amblycephala (Wuchang bream): 125258960
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Entry
125258960 CDS
T08212
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04020
Calcium signaling pathway
mamb04510
Focal adhesion
mamb04540
Gap junction
mamb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125258960 (pdgfc)
04020 Calcium signaling pathway
125258960 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125258960 (pdgfc)
04540 Gap junction
125258960 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
125258960 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
mamb04052
]
125258960 (pdgfc)
Cytokines and neuropeptides [BR:
mamb04052
]
Cytokines
Growth factors (RTK binding)
125258960 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Neur
NDUS4
Motif
Other DBs
NCBI-GeneID:
125258960
NCBI-ProteinID:
XP_048032178
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All DBs
Position
LG23:complement(11689200..11756146)
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AA seq
343 aa
AA seq
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MIPLLLLILISSLHQHESVAESSHISKSHHASTKEQNGVHESQHEKVLSVTGDGIIQSPD
FPNTYPRNTVIAWRLVAVTESSRIQLTFDPRFGLEDAEDGICKYDYVEVKEPVGGIVLGR
WCGSQMVPGPQVSKGNQILIRFVSDEYFPSDPGFCIRYTLLHQRQSEPEAPAVIPAWMQS
VDVLSEAVAGFSTMEEVMKYLEPDRWQVDMEDLYKPTWQVLGKSFFHQKKSRGVVDLNLL
REEVRLYSCTPRNFTVSLREELKRTDAIFWPSCLLVKRCGGNCACCSFNCYDCQCSPTKV
VKKYHEVLMLKHRAGGRGLQKTLTDVPLEHHEECSCVCKNDSD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattccattgcttctcttgattctcatatcgtctcttcatcagcatgagtcggtggcg
gaatcgagtcacatcagtaagagtcaccacgccagcactaaagagcaaaatggagtgcat
gagtctcaacacgagaaggtcctcagtgtcactggggatggaattattcaaagccctgac
ttccccaacacatatccccggaatacagttatagcgtggcggctggtagcagtcacagaa
agttccaggatccagctgacctttgatccgcgctttggcctggaggacgccgaggacggc
atttgcaagtatgattacgtggaggtgaaggaacctgttggagggatagtgttgggtcgt
tggtgtggctcacagatggttccagggccccaggtatccaaggggaaccagatcctgatc
cgcttcgtctctgatgaatactttccctcagaccctggattctgcatccgttacactttg
cttcatcagaggcagtcagagcccgaggcccctgcagtgattcctgcatggatgcagagt
gtggatgttctgagtgaagctgtagctggtttcagcacaatggaggaagtgatgaaatac
ctggagccggatcgctggcaggtggacatggaggacctctacaagcctacctggcaggtg
ttgggcaaatcgttcttccatcaaaagaaatccagaggagtggtggacctgaacctgctt
cgtgaggaggtgcggctctacagttgcactccacggaactttactgtctcattgcgtgag
gaactgaaaaggacggacgccatcttctggcccagctgcctgctggtgaagcgctgtgga
gggaactgcgcatgctgctctttcaactgctatgattgccagtgctcgcctaccaaggtg
gtcaaaaaatatcatgaggttctgatgctgaagcacagggcagggggtcggggactgcaa
aagactctaacggatgtccccctggagcaccatgaggagtgtagctgtgtctgtaaaaat
gactcagactaa
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