Megalobrama amblycephala (Wuchang bream): 125258961
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Entry
125258961 CDS
T08212
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03420
Nucleotide excision repair
mamb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125258961 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
125258961 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125258961 (cul4b)
03400 DNA repair and recombination proteins [BR:
mamb03400
]
125258961 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125258961 (cul4b)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
125258961 (cul4b)
DNA repair and recombination proteins [BR:
mamb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
125258961 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
125258961 (cul4b)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125258961 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
NurA
DUF3292
Motif
Other DBs
NCBI-GeneID:
125258961
NCBI-ProteinID:
XP_048032180
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All DBs
Position
LG23:10384313..10396677
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AA seq
861 aa
AA seq
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MFPTGLPSPNPPPPAQEPKPAASDVHNDSSLTSSKKRKINSSEKEDIDSISSSPKAICNS
SSTTSCSSSSQQQQHIQKKLRFEDPLDLIGLDVKMAEESCNPAESCSKARNVFLTGGVGH
HANGLTKSVGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKC
WQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILL
LIERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPE
YLHHVNKRLEEEADRVITYLDQSTQKHLIATVEKQLLGEHLTAILQKGLNNLLDENRILD
LSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDV
CFMKNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATG
IEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENPNQYNYVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccaccgccagcccaagagcccaaaccg
gcagcttctgatgttcacaacgacagtagcctaacatcttctaagaagaggaaaattaac
agttccgagaaggaagacattgattcaatatcttcgtctcctaaagccatttgcaattcc
tcctccacaacgtcctgctcttccagttcacaacagcagcagcacatccagaagaagttg
aggttcgaggacccgctggatttgatcggactggatgtgaagatggccgaggagtcgtgt
aaccctgccgagtcgtgttcaaaggcgagaaatgtgttcctgactggaggtgttgggcat
catgcgaacggactaacgaagtctgtgggctccgccaccttctccaacagtaaacccggt
gctgcgaagaaacttgttatcaaaaactttaaagaaaagcccaaattaccggagaattac
acaaatgagacctggcagaagctgaaggaggcagtagaggccatacagaacagcacttca
attaagtacaatctagaggagctatatcaggctgttgaaaacctgtgctcccataagata
tctgctaagctttataaacagctcagagtggtctgtgaagaccatatcaaggcacagatt
gaccagttcagagaggatgccctagacagtgttctgttcctcaagaaaatagacaaatgc
tggcaagatcactgcagacaaatgatcatgattaggagtatatttttgtttttggatcgc
acatatgttttacaaaattcaatgctgccatcaatctgggacatgggcttggagttgttt
cgtttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggattctgctt
cttattgagagagagcggagtggagaggctgtagaccgcagtctcctgaggagtcttctg
agcatgctctcagatctgcagatttatcaggattcatttgagcaacgctttctggaggag
acaaatcgactgtatgctgcagagggccagaggctcatgcaggaaagagaggtgccagag
tatctccatcatgtcaacaaacgtctggaagaggaggcagacagagtcattacatactta
gaccagagcacacaaaaacacctcattgccacagtggaaaagcaactgcttggagaacac
ctcactgcaatacttcagaaaggtttaaataacctgttggatgagaaccgtattctggat
ctgtctctgctgtatcagctcttcagtcgtgtgagaggcggcgtccaggttctgctgcaa
cattggattgagtacataaaggcctttggaagcacaattgtcatcaacccagagaaagac
aagacgatggttcaggagcttttggatttcaaggataaagtcgatcacatcatcgatgta
tgtttcatgaagaatgagaagtttgtaaatggcatgaaggaggccttcgagacctttatc
aacaaacggccgaacaaacctgcagagctcatagcaaaatatgtggattcaaagcttcgt
gctggaaacaaagaagcaactgatgaggaactcgagaaaatgctggacaagataatgatc
atattcaggttcatttacgggaaagatgtctttgaggccttctacaagaaagacttagca
aagaggttactggtgggaaagagtgcctctgtagatgcagagaaatcaatgctgtcaaaa
ctgaagcatgaatgtggagctgcatttactagtaaactggaaggaatgttcaaagacatg
gagctgtcaaaagatattatggtgcagttcaaacaacacatgcaatgccaaaatattccc
gggaacattgagctgacagttaacatcctcaccatgggttattggccaacatacgtccct
atggaagtgcatctgcctccagagatggtgaaattgcaggagattttcaaaacgttttac
cttggcaaacacagcggacggaaactacagtggcagtcgacgttaggacattgtgtttta
aaggcagaattcaaagagggcaaaaaagagcttcaggtgtctctgtttcagacattagtt
ctgcttatgtttaatgaaggggaggagttctctctggaggacattaaactggctacaggc
attgaggacagtgagctgaggcggactctgcagtctctggcctgtgggaaggcgcgtgtc
cttaccaaaatcccaaagagtaaagacgtagaagatggagacaagttctcatgtaatgat
gacttcaaacacaaactcttcaggattaaaatcaaccagatccagatgaaagaaacggtg
gaggagcaagccagcactacagagagagtattccaggaccgtcagtaccaaatcgatgct
gccattgttcgaatcatgaagatgaggaaaactctcagccataatcttctggtatctgaa
gtgtataaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagagtca
cttattgacagggactacatggaaagggataaggagaatcccaatcaatacaactatgtg
gcttag
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