Megalobrama amblycephala (Wuchang bream): 125259026
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Entry
125259026 CDS
T08212
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1 isoform X1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
125259026 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mamb03019
]
125259026 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mamb04147
]
125259026 (g3bp1)
Enzymes [BR:
mamb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125259026 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
125259026 (g3bp1)
Messenger RNA biogenesis [BR:
mamb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125259026 (g3bp1)
Exosome [BR:
mamb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125259026 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
125259026
NCBI-ProteinID:
XP_048032300
LinkDB
All DBs
Position
LG23:complement(5375799..5385505)
Genome browser
AA seq
486 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDNNGKPAEAVYGQSE
IHKKVMALSFRDCHTKIRHVDAHATLNEGVVVQVLGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDIFRYQDEVFGDSDSEPPEESEEDVEDLERVHSPEVVQEESAGYYEQTPCVE
PEGPQEEVSVTPEPQPEPEAEVEPEPAAVELKPEPVSQPEVHVEEKTQRSSPSPTPADTT
PTMPEDNRPSSWASVTSKNLPPGGVVPATGVPPHVVRVPSTQPRVEVKTETQTTAQRPQR
DQRPRDQRPGPAPAQRTSRPGGVQKCSESTVREGESGESEVRRTVRYPDSHQLFVGNVPH
DVDKNELKEFFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKLRGDVRLN
VEEKKTRSAREGDRRDIRPRGPPGGPRDRIGGSRGPPARGGMAQKPSFGAGRGTGPSEGR
YAGPRQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagcttgtcgggcgagagtttgtccgacagtactac
accctactgaaccaggctcctgactacctgcacaggttttatggcaagaactcctcttat
gtacacggtggtctggataataacggcaaaccagcggaagcagtctatgggcagtctgaa
atccataagaaggtgatggctctcagcttccgtgattgtcacactaagatcaggcatgtc
gatgcccatgccaccctgaacgagggagtggtggtgcaagtgttgggggagctgtccaac
aacatgcagcccatgaggaagttcatgcagacgtttgttctggcacctgagggtaccgtt
gcaaacaagttctacgtacacaacgatatcttccggtaccaggatgaagtgttcggggac
tcggattcagaacctcctgaggagtctgaggaggacgtggaggatctggagcgagtgcac
tcacctgaggtggtccaggaggagtctgctggatactacgaacagacaccttgcgtggag
cctgaggggccgcaagaagaggtgtctgtaactccagagccccagcccgagccagaagca
gaggtggagcctgagccagcagctgtggagctaaaaccagagcccgtaagccagcctgag
gttcatgttgaggaaaagactcagaggtcttccccttctcccacacctgctgacaccaca
cccactatgccagaggacaaccggccatcttcatgggcttcagtcactagcaagaatctc
ccaccgggaggagtggtccctgccacaggagtccctccacatgttgtccgagtcccatct
acgcagccacgtgtagaggtgaaaacagaaacgcagaccacagcacagagaccccagaga
gaccagagaccacgtgaccagagaccaggacccgctccagctcaaagaacatcgagacca
ggaggtgtgcaaaagtgtagtgaatctacagtgagggagggtgagagcggagagtcggag
gtgcggcggacggtccggtatcctgacagccaccaactctttgttggaaacgtacctcac
gacgtggataagaacgagctcaaggaattctttgaacagtacggcactgtccttgagctg
agaatcaacagcggcggaaagctgcccaactttggattcgtggtatttgatgattctgag
cccgtgcagaagatcctcagtaatcggcccattaaactgcgaggagatgttcggctgaac
gtagaggaaaagaagacccgctcggcccgtgaaggtgacaggcgggacatccgccccaga
ggccccccggggggaccgcgtgacaggataggcgggtcaaggggaccgcccgcccgtgga
ggcatggctcagaaacccagtttcggagccggtcgaggcacaggacccagcgagggccgc
tacgcaggaccacgtcagtga
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