Megalobrama amblycephala (Wuchang bream): 125259108
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Entry
125259108 CDS
T08212
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
125259108 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mamb01009
]
125259108 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125259108 (pcdh20)
Protein phosphatases and associated proteins [BR:
mamb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125259108 (pcdh20)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125259108 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
125259108
NCBI-ProteinID:
XP_048032458
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All DBs
Position
LG23:complement(21696994..21702148)
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AA seq
831 aa
AA seq
DB search
MMNWTILQWVLLLASAGQIQSHALRFTILEEQEVGIKIGSLSRNYSAPYQLFDEYIRVDE
STGDLFTKKRIDRETLCPSHQDRDCTFSNTAVVSHSEFVLITIVVDDINDNAPIFERDEI
HIRIPEDASNGTGFPLDDQAHDKDFANNGLIHYHLEGSDGFFGIRQDGYELELVVERKLD
RETQENHFLVLVAVDGGSVPLSATAILNVTVTDVNDNCPEFDADSPITAIVPGLGIKGTA
VAQLKATDKDLGQNAQITFSFSRQISDRAKTLFHMDGHTGLISLAVDVQVDSPEEHVLKV
FANSPLCPPAQTQVTIYIQPVTSPEPTIKIRFVAENKNQVIVLQENEPPTVLALLELEDT
SSDKGTLSLEADSMPFSLKPKAGSYLLLTSKPLDFEMCSEYDVTVVISDPHGTHLHGRKV
IKVVVEDVNDNAPMFDQTHYEKDIKENNIPGVFLLKVQATDADSHQFGKVRYRLTNGGPF
IIHEETGVISVAESLDREQQDRYQLTVLARDGGDPSQEGSAIVSINVLDLNDNPPAFSTP
HFYFFVSESLPRLSQVGKVTVSDTDEGDNGKIVDVRILNEKVPFAIDLAQGSIRSTGEVD
REKQDRYELLVVATDGGRPALSTTAKMTVFVEDVNDNQPKVLLPSSNLSCQTISPATRAG
SMITKIYAIDEDSGMNSDITYQIVASEPALHSPFQIDQHSGNITLVQHLRSEDYGMHHLF
VVIRDGGKPDPLQTTVWVNLLVNETREKCHVSAVPEYLPATLPPPMPLKDCRGESNAWLV
FFLSGLVLMLISGCVLLAVGVMIMKHKHTKRKAKKKNAWETGNLCELKPLN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatgaactggactatactacagtgggtgcttctcttggcatctgcagggcaaatccaa
agccatgcacttcgtttcaccatcctggaggagcaagaagtaggcattaagatcggaagt
ctaagcaggaactactcagctccataccagctcttcgatgagtacatcagagtggacgaa
agcacaggggatctgttcactaaaaagcgcatagacagagagaccttgtgtccgtcacat
caggatagggactgtactttttcaaacactgcagtcgtgagtcattctgaatttgtgctg
ataacaattgttgtggatgatattaatgacaacgctcctatttttgaaagggatgagatt
catatacgcatacctgaagatgcatcaaatgggacgggttttccactggatgaccaagcc
catgataaggactttgccaataatggcttgatacattaccatttagaaggctctgatggc
ttttttggcatcagacaagatgggtatgaacttgagctggtggtagaaagaaaactggac
cgggaaactcaagaaaaccacttcttggttcttgtagcagtagatggaggttcagtgcca
cttagcgctacagctattctcaatgtaactgtaaccgatgttaatgacaattgcccagag
tttgacgctgatagccctatcacagccattgtgccaggattaggaatcaagggcactgcg
gtggcgcagcttaaagctacagacaaagacctgggccaaaatgcccagatcacattctcc
ttcagccgtcagatctcagacagggctaaaacgctctttcacatggatggacacacaggc
ctgatcagcttagctgttgacgtgcaggttgacagtcccgaggagcacgtgttgaaagtc
tttgcgaatagcccactttgcccccctgctcaaactcaggtaaccatatacattcagcca
gtgacgagtccagagccgaccataaagatcaggtttgtcgcagagaataaaaaccaagtg
atcgtgttacaagagaacgagccccccactgtcttggccctcttggagttagaagacacc
tctagtgataaaggtactctgtccttagaagctgacagtatgccattttctttgaaacca
aaagcaggcagctatttgcttttaacatcaaaacctctagattttgagatgtgcagcgag
tatgatgttacagttgttatttctgatcctcatggcacacacctgcacggaaggaaagtg
atcaaagtggtggttgaagatgtgaatgataatgccccaatgtttgatcaaacacactat
gaaaaggacatcaaggagaacaacattcctggtgtgtttctgctgaaagtccaggctacc
gacgcagacagtcatcagtttggcaaagtaaggtacaggcttacaaatgggggacctttc
ataattcacgaagagacgggtgtgatttcggtagcagagtcgttggatagagaacagcag
gacagataccaactgactgttctggcccgggacggcggcgatccttctcaggagggctct
gctattgtgtccataaacgtactggatctgaatgacaatccaccggccttttcaacccca
catttctatttctttgtgtctgagagccttccacgactttcccaagttgggaaagtcaca
gtaagcgatactgatgaaggagacaacggcaaaatagtggatgtgcggattttaaatgaa
aaggtcccttttgccatagacctggcgcaaggatcgatccgcagcactggtgaagtcgat
cgtgagaagcaggaccgctatgagcttctggttgtagccacagatggcggcagaccggct
ctttccactacggcgaaaatgaccgtttttgttgaggatgtcaatgataatcaacccaag
gtccttcttcctagcagcaacctctcctgtcagaccatatctccagccacccgagcaggg
agcatgataacaaagatctacgccattgatgaggactcaggaatgaattcggacatcact
taccaaattgttgcaagtgaaccggctctccatagccccttccagattgaccagcactca
ggaaacatcaccctggtccagcatctgcgcagcgaggattacggcatgcaccacctcttc
gtagtcattcgcgatggaggaaagcctgacccgctgcagaccaccgtgtgggtcaacctg
ctggtcaacgaaactcgggaaaaatgtcacgtgagcgccgtgccagaatacctgccggcg
acactgccacctccgatgccgctcaaagactgcagaggcgaatcaaatgcctggcttgtt
ttttttctcagtggcctggtccttatgctcatatcaggctgtgttcttctggcagttgga
gtgatgattatgaagcacaaacacacaaaaaggaaagcgaaaaaaaagaatgcatgggaa
actggaaatctctgtgaactgaagcctttgaactaa
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