Megalobrama amblycephala (Wuchang bream): 125259127
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Entry
125259127 CDS
T08212
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
125259127 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125259127 (atrx)
03036 Chromosome and associated proteins [BR:
mamb03036
]
125259127 (atrx)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
125259127 (atrx)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125259127 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
125259127
NCBI-ProteinID:
XP_048032478
LinkDB
All DBs
Position
LG23:22730329..22780189
Genome browser
AA seq
2056 aa
AA seq
DB search
MSTEILRSSKLNTLVTKLHEFLGNSPDDESIDSQDISNGKMATSDLNIPVEKMNEPGCSS
EMTKPSSSRSKRKPSFVTKHTAVDEPECANESGGEHCADDSMQSGLDINKLPQGTVVVKP
EPVANEAKDEFRGPEFRIRGSKVKEDSTRKRPDEQLQEIFNCTACGQQVNHFQRDSIFQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAFCKKCILRNLG
RKELSEIMSEESKWHCYVCCPEPLKDFVKTCEKVLLNLESSYKKPRGDNDKTKREDRKHK
HTKREKTAVNGQDYASDGTGTLTFSCKTLKVPKELVKKTKKLIETTNGLNRTFVQFLQHK
SKGPDVSAVSYRHLKAFKSVLADLKKAHAALEDSLEKEFEEKGLKFQNGEEQRPPDSQTA
GKTVVNSHHADPTAVREDGLDCPTKDHNPLVEEENQQNSYSADVEMKESLPLSPEKAQDW
SEESEAKDQEMADNPDFEESSVPAGEVSLDKDIVSVPPSVPEELFEMVESLAVKKEDDAG
NSTDSSDGKSTSNAEVVESNKSLTKLGKKLVVKLTPVPLKITIKRDKSNERSPSEDMDGE
TLHKEGQDSRRSPRMKTTPLRKSPEAKSKREPRSSTTKEERRDAVEEQCDSDSDEVPEVL
QTAALKASSDESEPENCGNASGKRTKKKLASRSTEKAKPKRKLDMGSSDSDQSNKSSTAK
KRSAKKKKGRESDSSNHNSDLEKEMKNLAKIDSGKKKSKGVKKEENECSKEGKKGPKRSF
ERKRRSQKEKAKTKEEFSSSDEEEEEEKEEEKQADNSDEDSDQQKIKPILESVMASIDGF
HQSSGDEVELKAESSQVVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGD
STKKGKYGAKKQEGSEKEEEDETSDSGSDVDVKKGGRRHRLLRKKLTLSEGDSDDETPVK
NKKETKKRGRRKVDSDDSADSDFEQSHSGSSDASVLSEAVSEDAEDNKSNKRKTRSSRKA
AKDGERSYQKEKKKRRRIKVQDSSSSGKSGEEEDGDGDGDGEGDDKGTPKNRKKIRKIIK
DDNLRTETRDALKEEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEET
KEPLVQVHRNLVTKLKPHQVDGVQFVWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVV
TFLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVTELATVKRPQER
AYALQRWQEDGGVMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILK
NEASAVSKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQ
NGQCADSTLADVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAVRLTPIQCK
LYRYYLDHFTGVGSALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDED
SMEEFIASETEESSMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGN
PEGRNRAEPVEEVRAPSNSGPGSPSPDWYKEFVVEADSEVLEHSGKMVLLFEILRMAEEV
EDKVLVFSQSLISLDLIEDFLELAGRAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTR
KKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG
QVKTVFVYRFLAQGTMEEKIYDRQVTKQSLSFRVVDQQQIERHFTMNELTELYTFEPDQL
DDPSEKKSKRATPMLPKDPVLAELLHSYKDQIVGYHEHDSLLDHKEEEALSEEDRKAAWA
EYEAEKKGLSMRFNQPSYSQMGVGSAPNSYFPFNVAALASMSNQQLEDLINQGRQKVLEA
TSALKSVPREPLEDIIAQVWKENPSLPEAQVQSMALGRQAGFELEIKHREAVYRDVLSKQ
QTLMMYVQKVIANRKVQEQQMALARQGMLLNQLAMQNGLAAPMNQMDLLGLYQQLGALQG
LPSSQLGKNPGPSKGL
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagagatcttaaggtccagtaagctgaatacattggtgactaaacttcatgag
ttcttgggtaattctccagacgacgaaagcattgattctcaagacatttccaatggtaaa
atggcaaccagtgacttaaacatccctgttgagaaaatgaatgagcccggttgctcctca
gaaatgaccaaaccttcatcttcacgctcaaagagaaaaccttcatttgtgaccaagcac
actgccgttgacgaacctgaatgtgcaaatgagagtggaggtgaacactgtgcagatgac
agcatgcagagcggtctggatattaacaagttaccacaaggcacagtggtggtgaagccg
gaaccggttgctaatgaagctaaagatgaattccgaggtccggagttccgtattagagga
agcaaagtgaaagaggacagtacacgtaaacgcccagacgagcagctccaggagatattt
aattgcacagcatgtggacaacaagtcaatcattttcagagggattccatctttcaacat
cctgcactgcatgttcttatctgcaagtcatgtttcaaatattatatgagtgatgatatc
agcaaggatgacgaagggatggatgaacaatgcaggtggtgtgcagagggtggtaatctg
atttgctgtgactactgcagcaatgccttctgcaaaaaatgcattttgcgcaaccttggg
cgaaaagagctgtctgaaatcatgagtgaagaaagcaaatggcactgctatgtgtgttgc
ccagagccgctgaaggactttgttaaaacctgtgaaaaagttttgctcaatttggaatct
tcttacaaaaagcccaggggagacaatgacaagacaaagcgtgaagaccgcaaacacaag
cataccaaacgagaaaaaactgctgtaaacggacaggattatgcatcagacggaacggga
acgttaaccttttcctgtaagacgttgaaggttccgaaagagctagtcaaaaagaccaaa
aaactaatcgagaccacaaacggtttgaatcgtacttttgtacaattcctccagcacaaa
tcaaaaggccctgacgttagtgcagtaagttatagacacttaaaggccttcaaatcagtt
ttggctgatctgaaaaaggcccatgctgctctggaggattctcttgaaaaagaatttgaa
gagaagggcctcaagtttcagaatggagaggagcaaagaccaccagacagtcaaactgca
ggtaaaacagtcgttaactcgcatcatgctgaccccactgctgttagagaagatggattg
gattgccctaccaaggaccataatcctttggtagaagaggaaaaccaacagaacagttac
tcagctgatgttgaaatgaaggaaagccttccactctcaccagaaaaagctcaggactgg
tctgaagaaagtgaggctaaagatcaggaaatggcagataatcctgactttgaggaaagc
tctgtcccagctggtgaagtgtctcttgataaagacattgtgtctgttccaccatctgtc
ccagaggaactctttgagatggtagagagtcttgctgtaaagaaagaagatgatgctggc
aactcgactgattctagtgatggaaaatcaacgtccaacgctgaggttgtggaatccaat
aagagccttacaaaactgggtaaaaagcttgttgtcaaactaacacctgttcctcttaaa
attaccataaaacgagataagagcaatgaacggtctccttcagaagacatggatggtgag
acattacataaggagggtcaagatagcagacgctcccccaggatgaagaccacaccctta
cgcaagtcaccagaggcaaagagcaaacgtgaaccaaggtcgtcaacgacgaaggaagag
cgcagggatgcagtcgaggagcagtgtgattcagattcagatgaagtccctgaggtcctg
cagactgcagctttgaaggccagctctgatgagagtgaacccgaaaactgcgggaacgct
tctggcaaacgtaccaagaagaagttggcttcccgctcaactgagaaagcgaagccaaag
cgcaaactcgatatgggctcctcagattcggaccagagcaacaagtcgtcaacggcaaaa
aaaagaagtgccaaaaagaagaagggcagggaatctgactcctcaaaccacaactctgat
cttgagaaagagatgaaaaacctggccaagattgatagtgggaaaaaaaaatccaaaggc
gtcaaaaaggaagagaacgaatgcagtaaagagggcaaaaaaggtcctaaaaggtcattc
gagcgaaaacgaaggtcacagaaagaaaaggcaaagaccaaggaagagttttcctccagt
gacgaagaggaagaggaggagaaggaggaggaaaagcaggctgataactcagatgaagac
agtgatcagcagaagattaaaccaatacttgagtccgttatggctagtattgatggtttc
catcagtcatcaggtgatgaagttgaattaaaggctgaatcctctcaggtggtggatgat
gacgatgaccctgagaatagaattgccaagaggatgcttttggcgcagatcaaagccaac
tattcatctggagctgatagttcatcggatgatgaaaacgcagacaaagaggatggggat
tcgacaaagaaaggaaaatatggtgcaaagaagcaagaaggaagtgaaaaagaggaagaa
gatgaaacttcagactcaggttcagatgttgacgtgaagaaaggtggacgcaggcaccgt
ttgttgcgtaagaaattgactctaagtgaaggtgactctgatgacgagaccccagtcaaa
aacaagaaagaaaccaaaaagagaggcaggcggaaagtggacagcgacgattcggcagac
tcggactttgagcagtcgcactcgggctccagtgatgcgtcagtgcttagcgaggctgtg
agtgaagacgcggaggataacaagagcaataaacgcaaaacacggtcgtccagaaaagca
gccaaagacggtgagagaagttaccagaaagagaagaaaaaacgacgtcgcattaaggtt
caggactcctcatccagtggcaagagtggagaggaagaggatggagatggtgatggtgat
ggtgaaggagatgacaaaggaacacccaaaaatcgcaagaagatccgcaagatcattaaa
gatgacaatctgcggacagagacccgagatgctctgaaggaggaagaggagaggaggaaa
cgcattgctgagagggagcggttgagggagaaactacgagagactattgtggtggaggag
tcatcacaggtcacgtgtcccatcaccacaaaactggtgctcgatgaggacgaggagacc
aaggagccactagtgcaggttcacaggaacctggtgaccaaactcaaaccccatcaggtg
gatggtgtgcagtttgtgtgggactgctgctgtgagtcagtgaagaaagtagagaagtct
tctggttctggctgtattctggcccactgcatgggtctgggcaaaaccctccaggtggtg
acgtttctccacactgtgctgctgtgcgagaaactgaacttcagcacagctctggtggtg
tgtccactcaacactgtgctcaactggctcaatgagtttgagaagtggcaagaaggcttg
aaggacgaggagagtttagaggtgacagagctggccacagtgaagagacctcaggagaga
gcgtacgctttacagcgctggcaagaagatggtggcgtcatgatcataggctacgagatg
taccgcaacctcacgcaaggacgaaacatcaagagcaagaagctgaaggaaacctttcag
aaaactctagttgatccaggtccggattttgtcatctgtgatgagggtcacatcctgaag
aacgaagcatctgctgtttccaaagccatgaactccatcaagactcgtcggcgggtggtg
ctgacgggaactccactgcagaacaacttgatcgagtatcactgtatggtgaacttcatt
aaggagaacctgctgggatcagtgaaagagttcagaaaccgcttcatcaaccccattcag
aacggtcagtgtgccgactccacactcgctgacgttcgtgtcatgaagaaacgagcacac
atcctctatgagatgctggcaggatgtgtccaaagaagagattatactgcccttacaaaa
ttcctgccaccaaaacatgagtatgtgttagcggttcggttaacacccattcagtgcaag
ctttatcgatactatctggatcactttacaggtgtcggttctgccttggagagtggaaga
ggtcgtgcgggaaccaaactcttccaggatttccagatgctcagcagaatctggacccat
ccgtggtgcctccagctggactatatcagtaaagaaaacaagggatacttcgacgaggac
agtatggaggagttcatagcctcagagacagaggagtcctccatgagtttgacctctgaa
gatgagaagcccaaaaggaagaagaaacgaggcaaaggaaaagagcagagctcagacaag
tctgacagtgatgacctggaagtgattaaggagtggaacaccagctctcgtggtggaaac
cctgaggggaggaatagagcagagcctgtggaggaggttcgggccccgtccaactctggt
cctggcagcccgtcaccggactggtacaaagagtttgtggtcgaggcagattctgaagta
ctggaacattctgggaaaatggttcttctttttgagatcctccgtatggctgaagaagtg
gaagataaagtgttggtgttcagccagtctctcatttctctggatctcatcgaggatttt
ctggagttggcaggcagagccaaagaggaagggaaactttcgccgtacaaaggtgagggc
aagtggttcagaaacattgactactatcgcctggatggttccacgaatgccatgaccagg
aagaagtgggcagaggaattcaatgacaccagtaatgttcggggtcgattgttcctcatc
tcaaccagagctggttctcttgggatcaacttggtagctgcaaatagagtcataatattt
gatgcctcatggaacccatcctatgacattcagagtattttcagagtctatcgctttggt
caagtgaagactgtgtttgtctacaggtttttggctcagggaaccatggaggagaagatc
tatgaccggcaggtcaccaaacagtcactgtccttcagagttgttgaccaacagcagatt
gaacgtcactttacgatgaacgaactgacagagctctatacatttgagcccgaccagctg
gatgatccctctgagaagaagagcaagcgggccacacccatgctgcccaaggatcctgtc
ctggcagaactgcttcacagttacaaagatcagatcgtcggctaccacgagcatgactct
ttgctggaccacaaagaggaagaggccctgagtgaggaagatcgcaaggcagcctgggcc
gaatacgaggccgagaagaagggtctgtccatgcgtttcaaccagccgtcctattctcaa
atgggcgtgggatcagcaccaaactcctacttccccttcaacgtggctgcattagcctcc
atgagcaaccaacagttggaggatttgattaaccagggcaggcagaaagtgttggaggcc
actagcgctctgaagtcggtgcctagggagccactggaggacatcatcgcacaggtgtgg
aaggagaatccgagtttaccggaggcccaggttcaatccatggctcttgggaggcaggcc
ggctttgagttggaaatcaaacacagggaggctgtttatcgtgatgtcctcagcaagcaa
caaactctgatgatgtacgtgcagaaggtgatcgccaaccggaaggtccaggagcagcag
atggccctggcgagacagggtatgctgctcaaccagttggccatgcagaatggtctcgcg
gctcctatgaatcagatggacctgctcgggttgtaccagcagctcggggcgctccagggc
ctcccctcatcacagctgggcaagaacccgggcccttctaagggactgtag
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