Megalobrama amblycephala (Wuchang bream): 125259144
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Entry
125259144 CDS
T08212
Symbol
pcdh10b
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-10b
KO
K16499
protocadherin delta 2
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mamb04515
]
125259144 (pcdh10b)
Cell adhesion molecules [BR:
mamb04515
]
Cadherins
Protocadherins
125259144 (pcdh10b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
125259144
NCBI-ProteinID:
XP_048032505
LinkDB
All DBs
Position
LG23:complement(16186837..16200691)
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AA seq
1026 aa
AA seq
DB search
MFVFLLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITNNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAMHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGTLVIQLNATDSDEGPNGEVIYSFSNHISSRVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTVTVVARDKGIP
SLATSKSIKVHVSDENDNAPTFTQAIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFVVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSLVE
GHSGERGTAKAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKEKKLNIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSXKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETPHHPNQMHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAACL
SRKRIC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttttgctcctgctgtgtctcgcggatggggtagtttcgcagatacgttac
tctgtgcccgaggaagcggagcatggcacgtttgtggggaatatagcagaggatttggga
ctggaccttacaaaactttcatcccgccgctttcaggtggtgcctagctcgcggacgccg
tacctggaagtaaacttggaaaacggggtgcttttcgtgaacgagaaaatcgaccgggag
cgcatctgtaagcagagcgccagctgtttgcttcacctggaagtgttcctggagaaccca
ctcgagctctttcgcgtggagatagaggtggtggacatcaacgacaacccgccgagcttt
ccggagacggacatcaccgtggaaatatccgagagcgcaaccccgggtacgcgcttccct
ttggagagcgcttttgatccggatgtcggtagtaacgcattgcgcacttacgacatcacg
aacaacaactatttctacttagacgtgcaaacacagactgatggcaacaaattcgccgag
ctggttttggaaaagccacttgatcgggaacaacaggcgatgcaccgttacgtcctcacg
gccgtggacggtggccagcctcctcggacaggtacagcactgcttgtggtcagggtactc
gactccaacgacaacgtccccgtgtttgatcagccggtgtactcggtcaacctggccgag
aacgcgcccgtgggcacgctcgtcatccagctgaacgcgaccgactcagacgagggcccg
aacggagaggtaatttactcgttcagcaaccacatctcaagcagggtcaaggaactgttc
gatatcgatgcccgaacgggccgtatagaggtcagaggtgaggtggactttgaggagagc
agtctgtatcagatttacgttcaagcgaaagacatgggacctaatgctgtgcccgcgcac
tgtaaagttttggtcaaagtgacggacgtgaacgacaacgctccagagatcatcttcagc
accgtcacggagtcagtgagcgagaacgcagccacgggcacagtcatcgctctgctcagc
gtcaccgataaagactctgaagacaacggccagacgcatgtggagattctcggagatgtt
ccttttaaactcaaaacctctttcagaaattattacactatcgtgaccgacggtcctctc
aaccgagagactgtagaagcgtacacggtcaccgtggttgcgagagataaagggattccg
tctctggcgaccagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgccc
acgtttacgcaggccatttatgatgtgtatgtgactgaaaacaatgtccccggtgcttac
atctacgctgtcagtgcagtcgaccctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatccagggtatgtctgtggtcacgtatgtgtccatcaactcggag
aatgggtatttgtacgccctcagatcctttgattatgagcaactaaaagacttcagcttc
gtggttcaagcgagagactcaggcagccccgagctgtggtccaacgccacggtgaacgtc
attatagtagatcaaaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctctgccgagccaggctacctagttacgcgtattgtc
gccatggatgcagatgatggagagaacgcgcgcttgtcctacagtatacagagaggtaac
gagaatgggatgttccgaatggactggcgcaccggggagttgcgcacggcccgccgggtg
tcagtcaaacgagacccgcaacagctgtatgagctgcttattgaggtaagggatcacggg
cagcctcccatgtcatgcagcgcggtggtgcaggtgacactcgtggacagtctcgtggaa
ggccacagtggagaacgcggtactgccaaggccaaagacgcgtctctggacttgacgctc
atcctcatcatcgcgctcggctcagtttccttcatcttccttctggctatgatcgtgctg
gccgtgcgctgtcaaaaggagaaaaagctgaacatctacagcacctgcctggcgagcgac
tgctgctgcctcgtgggctgcgggtcgtgcgggtcaggcggctgctgcggtcgtcaggcc
cgggctgcccggaaaaagaagaaactgagcaagtcagatatcatgctggttcagagcact
aacacagccaacgtgagcgtggcgagcgccgcgcaggtgcccgtggaggagtcagggagc
ttcggttcgctacatcaaagtcagaactactgctatcaggtctgtctgactccggaatcg
gccaaaacggatctcatgttcctgaaggcctgcagcccgtcgcgcagcaacgacaccgag
cacaacccgtgcggagccatagtgaccggctatacagaccaacagcagccggacatcata
tccaacggcagcctgctctccagtgagacaaaacaccagagagcagagctcagttatttg
gtggaccgaccaaggcgtgttaacagctctgcattccaggaagcagatatcgtgagcntc
aaagacagcggtcatggagacagtgagcagggagacagtgaccatgacgccatgcatcgc
ggacattcctctggagcagacctgttctccaactgcacagaggagtgcaaagccctcggc
cactcagatcgctgctggatgccaagtttcgtgcccaccgaggcgcgacagggtgccgat
taccgcagcaacctgcacgtgccgggcatggactctgtgcccgactctgaggtatttgag
ggcgagacattggcaggcgatcagtcattctcaacctttggcaaagagacgccacaccac
cccaaccagatgcaccaacatcaacaccatcaacaccacctcaatgcttccacgctagag
aggaaagagttcgatgcacttctgtgtaactcgcgcatgccttacaaagccgcctgtctg
tcgcggaaaaggatatgctag
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