Megalobrama amblycephala (Wuchang bream): 125259295
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Entry
125259295 CDS
T08212
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04010
MAPK signaling pathway
mamb04210
Apoptosis
mamb04218
Cellular senescence
mamb04620
Toll-like receptor signaling pathway
mamb04621
NOD-like receptor signaling pathway
mamb04622
RIG-I-like receptor signaling pathway
mamb04623
Cytosolic DNA-sensing pathway
mamb04625
C-type lectin receptor signaling pathway
mamb04920
Adipocytokine signaling pathway
mamb05132
Salmonella infection
mamb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125259295 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125259295 (nfkb1)
04218 Cellular senescence
125259295 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
125259295 (nfkb1)
04621 NOD-like receptor signaling pathway
125259295 (nfkb1)
04622 RIG-I-like receptor signaling pathway
125259295 (nfkb1)
04623 Cytosolic DNA-sensing pathway
125259295 (nfkb1)
04625 C-type lectin receptor signaling pathway
125259295 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
125259295 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
125259295 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
125259295 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mamb03000
]
125259295 (nfkb1)
Transcription factors [BR:
mamb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
125259295 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_5
Ank_4
Death
Motif
Other DBs
NCBI-GeneID:
125259295
NCBI-ProteinID:
XP_048032808
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All DBs
Position
LG23:complement(25071031..25117248)
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AA seq
934 aa
AA seq
DB search
MAGEDPYHAGFMEQIEFPNDTMWMTMDPTPFQGIHNNNVMRTVDGPCLRIIEQPKQRGFR
FRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNSPDPHLHAHSLVGK
QCDKGICIADLQPKDSVISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPEID
GLQGEVRIPREITDPARGLISNAANQQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPVIS
DPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDDSGLTWEA
YGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDK
EEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGHFFQGYPNYNNFGS
GYNFSSGMGGGGNTIKHTCQDPVEDSDEDSDSDTDDDPASGGVVRICAQHELVPLNLGVA
SDDTQPTEDLELDATGYVLESHLAELAGRQAQALFHYALSGDARMLLAPQRPLMTTQDEN
GDTGLHLGVIHSQTDAVRNLAQVISALPGEDVLNMRNDLYQTPLHLAVLTQQTEVVEALL
EAKVDVTLTDRHGNTALHLAAQQKEENMLRLLLKHKSVAQLTNIPNTAGLCPLHLAVKAN
SLSCVRALLDGGADVEVQELTCGRTALHLATELGNLSLAGCLLLEGDAYVDSVTYNGSTP
LHIAAGRDSSKLSALLMAAGADPHKENFEPLFFKDDELCGTCEDEEEDEGYIPGTTPLNM
AISPEVYDILNGEEYQPTTIVVQPQGDMNSLSSDTKQELCQALEGQTEGWESLAHALGLG
ILTSAFRLSSCPAGKLLDSYEVSGGTVHELVEGLKHIGNSSAVSLLQAVCKETEAVQTTP
QLTGPGLCKSIQGLTLGPHQEESGICDSGVETSF
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggacccataccatgcagggttcatggaacaaattgagttccctaacgac
acaatgtggatgaccatggacccgacaccatttcagggcattcacaacaataatgttatg
agaacagttgacggaccttgtctgcgaatcatcgaacaaccaaaacagaggggcttcagg
ttccgctatggttgtgaaggcccctcccacggcggactcccaggggcctccagtgagaag
aacaggaagtcttacccacaagtgaagatctgtaactaccagggagcagcacgagtggtt
gttcagctggtgaccaactctccggacccccatctccatgctcacagtctggtgggcaaa
cagtgtgataaaggaatctgcattgccgacttgcagcccaaagattcagttatcagtttt
cctaacttgggcattttgcatgtgacaaagaagaacgtaagtaaagttttggaggagagg
atgattgaggcctacaggatgggatataactacggcatatccattcatcctgaaatagat
ggcctacagggagaagtccgcattcccagagaaatcacagatcctgcgaggggcctgatt
agcaatgcagccaatcaacagtcgaaagagatggacctgagcgtggtacggctcatgttc
acagccttcctgcccgatagtgatggagggttctcccgcagactggagccggtcatttca
gaccccatctttgacagcaaagccccaaatgcctccaatctgaagatagtgcggatggat
cggactgccggctgtgtgacgggaggagaggaggtctatctactatgtgacaaagtccag
aaagatgacattcaggtgcggttttatgaagatgatgattcaggtctgacctgggaggcc
tatggggatttctctcccactgacgtccacagacagtttgccatcgtcttcaagacacct
aaatatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctcaagaggaag
tcagacaatgaaacgagcgaacctaagccattcacctaccatccacagattatagacaaa
gaagaagtccagagaaagaggcaaaagaccctgccaaatttccaggactacagtggtgca
ggaggcggagctggaggcatgtttagaggaggagggggtgggtcgacagcagggggcggc
cccagtggaggaggaggacatttcttccagggatatccaaattataacaattttgggtct
ggatacaacttctcctcaggcatgggaggaggcgggaacaccatcaagcatacatgtcaa
gacccagtagaagacagcgatgaggatagcgacagtgatacggatgatgatcccgcttca
ggtggagtggtgcgaatttgtgcacaacatgaacttgttcccctgaatctgggtgtggcg
agtgatgatacgcagcctacagaagatcttgagttagacgccacaggctatgtgttagag
tcacatttggctgaactagctggaagacaggctcaagctctctttcattacgcattaagt
ggtgatgctagaatgcttttggctccacagcgccccctcatgaccactcaagatgagaac
ggagacacgggtttacatctgggagtgatccacagtcagacagatgctgtgcgaaatcta
gctcaagtcatctctgctctccctggagaggatgtactcaacatgaggaatgatctctac
cagactcctttgcacctagcagtgttgacgcagcagacagaggtagtcgaggccttattg
gaggccaaggtggatgtcacactgacagatcgccatggaaacacggcacttcacctagcg
gctcaacagaaagaggaaaacatgctgcgattgctgctaaagcacaagtcagtggcgcag
ttaactaacatccccaacacagcaggtctctgtccgctccacctggctgtaaaggcgaac
agtttgagttgtgttcgggccctcctggatggaggggcagatgtagaggttcaggagctt
acatgtggccgcacagcactccatctggccacagagctgggcaacctttccctagcgggc
tgccttctgctggagggtgatgcatatgtagacagcgtcacctataacggctccactcct
ctgcacattgctgcaggacgagactcaagcaaactgagcgcacttctaatggctgcggga
gcagatcctcataaggagaactttgaaccactgttctttaaagatgatgagctgtgtggc
acatgtgaggatgaggaggaggatgaaggctatattcctgggacgacccctctgaacatg
gcaatttccccagaggtgtatgatattctcaatggagaagagtatcagcccaccaccatt
gtcgttcagccgcaaggtgacatgaatagcttgagctctgacacaaagcaggagctgtgc
caggcactggaggggcagacagaaggctgggagagtctggctcatgctctgggccttggt
atcctgaccagtgccttcagactcagctcctgccctgctggaaagctgctggacagctac
gaggtgtctggtggaacggtgcatgagctggtggagggactgaagcatattgggaacagc
agtgctgtcagtttactccaggctgtgtgtaaggagactgaagctgtccagaccacgcct
cagctcacaggtccagggctctgtaagtccattcagggtttgacactgggcccccatcag
gaggagagtgggatatgcgacagcggggtggagacttctttctag
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