Megalobrama amblycephala (Wuchang bream): 125259439
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Entry
125259439 CDS
T08212
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb02010
ABC transporters
mamb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125259439 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125259439 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mamb02000
]
125259439 (abca1b)
Transporters [BR:
mamb02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
125259439 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
Motif
Other DBs
NCBI-GeneID:
125259439
NCBI-ProteinID:
XP_048033028
LinkDB
All DBs
Position
LG23:26216575..26261117
Genome browser
AA seq
2279 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDN
SLDGFKELISAVKIMQNNTAGFKLKDFLRENETLSTFLQQNASFSQNFVKNILEADVNLE
KVLIKGFGVHLRDMCSSTTLEDFVTIPDKVVAEFTQDIICTSPKSWLDQAERHFKSNLDF
LKPIRSEIRTNATDVRQVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTKNATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHNPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKFWNFMENSEEMDLMRTLLRNNATASFFSAQLAGTQWKVEDVISFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKLVNESMSLLDNRKFWAGIV
FLDVQPNSSELPQHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DVIEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIETVFPGQYGIPRPWYFPFTKSYWFGENSTNNTAIHRKKGAVCIEEEPTHLELGVY
IDNLVKVYSHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIM
GKDIRSELSSIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKAEMEQILNDTG
LPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKYRAG
RTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNNEPSLSS
CRNSSSTVSFIKKDDNASESSSDAGLGSDQESEAATAIGTTWPESPVVPVDVALISSLIL
KHVPAARMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLGISSYGVSDTTLEEIF
LKVAEDSGVDTEIISDGTVPVRRHRRHAFGGDHQSCLKPLTDDDDFECNESDVDPESKET
DYLSVADGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFS
LIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLNALLDDPGFGTRCMEGEPIP
EAPCTMGEEEWSTPEVAESVMDIFTTTNWTMHNPSPACECSCNGKKKMLPECPAGAGGLP
PPQIKISETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSTQVL
PPAEEIDDAISRVRDIFQLGKDSGSAPDRFLKSLSAFINGLDTKNNVKIWFNNKGWHSIG
AFLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIF
AMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILIFVC
FQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGINGSV
STFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSP
LEWDMVGKNLFAMAVEGAVFFIITVLIQYRFFFEPKSLSTKLSPIGEEDEDVARERQRIM
SGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDS
VVSKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCE
VAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKARRAL
WNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIIL
RVAGPDPDLQPVMKFIECELPGSTLKEKHRNMLQYQLPSSLTSLAHIFCILAKNKEFLRI
EDYSVSQTTLDQVFVNFAKDQSDDHSDSSIRRKETAVNMALLSPLSTKENMEKPIESFV
NT seq
6840 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgctgtggaagaacttcacctatagaagaaga
caaacgctccagctgctgacggagattgtgtggcctctctttattttcttcatcctgatc
gccgtgaggttgaattacccaccttacgaacaacatgaatgtcactttccaaacaaagcc
atgccctcagcaggcactctgccctggatccagggcattgtctgcaatgccaacaatccg
tgcttccgacacccaacccctggggaatctccgggagtcgttgggaacttcaatgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactttacagtcaaaatgacaac
agcttagatggattcaaggagcttatcagtgcagtaaaaatcatgcaaaataacacagct
ggtttcaagctgaaggacttcctgcgtgaaaacgagactctctcaacgttcctccagcaa
aatgcctcattttcccagaattttgtgaagaatattctggaagctgatgtgaatcttgaa
aaggtactgatcaaaggtttcggcgtccatctgagagatatgtgcagctccaccacactt
gaggactttgtgaccatcccagacaaagtggtggcggaattcacccaggacatcatctgc
acgtctccaaaaagctggctagaccaggctgagagacacttcaagtccaacctggatttc
ctcaaacctattaggtcagaaataaggactaatgccactgatgtccgtcaagttgccaaa
gccacagacaaccttctggagagccttggatcactggctgtggagttggccagtatgagg
agctggagtgatctgcgaaacgagatcctgtttctgaccaaaaacgccaccggctcaccg
agtctgatgtaccaggctgtgtcccgtattgtgtgtggtcacccagaaggcggtggccta
aagatcaaatccctcaactggtatgaagacagcaatttccaggcgctgtttggaagccac
aatgacagcgatgatgaaccggtttcagtctacgacaataccaccactccatactgtaac
aacctgatgaagaacatggaagccagtcccatctctcggatgatctggagagcactgaaa
cctcttctgatgggaaagatcctctacacaccacataaccctgcaacacagaagatcatt
catgaggtcaataagacttttcaggagcttggaattctacgagatttaggaggaatgtgg
gaagaagccagaccaaagttttggaacttcatggaaaacagtgaagaaatggatctgatg
cggacgcttcttcgaaacaatgccactgctagtttctttagtgcccagttggctgggact
cagtggaaggtggaagatgttatcagcttcttgtctaagcactccgaggacacacgtccc
catggaacggcatttacgtggcgggatgtcttcaatgagacggaccaggcaattatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgtgagcacagaggag
aaactggtgaatgagtccatgagtctcctagataacagaaagttctgggcgggaattgtg
ttcctggacgtgcagcccaacagctcagaacttccacaacacgtcaattacaagatccgc
atggacatcgacaacgtggagcgcacaaacaagattaaagatgggtattgggatcctggt
cccagggctgatccctttgaggatttgcggtatatttggggaggatttacttaccttcag
gatgtaattgaacacagcatcatcagagcagttactgggaccaaagagaagactggtgtt
tatatccaacagatgccttatccatgttatgtagatgatattttccttcgcattatgagc
cgctccatgcctctcttcatgactttggcctggatgtattcggtggccatcatcatcaaa
ggtgttgtctacgagaaggaggcccgactcaaggagaccatgaggattatgggactagac
aatggaatcctgtggttcagctggttcattagcagcctcattcctcttctcatcagtgca
ggcctgctggttcttctactcaagatgggaaatctcctgccctatagtgaccccggcgta
gtctttctcttccttgggtcatttgctgttgtaaccatcatgcagtgtttcctgatcagt
acagcgtttgcacgtgccaacctggcagcagcctgtgggggcattatctactttaccctc
tacctgccttatgtgctgtgcgtggcttggcaagactacgtgggcttcaccgccaaagtc
atcgctagcttactgtctccagtggcatttgggtttggctgtgagtattttgcactgttt
gaggagcagggtgtgggcatccaatggaataacctcttctccagccccatggaagaggac
aactacaacctcaccacctgcctcatcctcatgtactttgatgccttcctgtatggggtc
atgacctggtacattgagaccgtgttcccagggcagtatggcattcccaggccgtggtac
ttccccttcactaaatcttactggtttggagagaacagcacaaacaatactgcaatacat
cgaaagaagggggctgtttgcattgaagaggaacccactcatcttgaattgggagtttac
attgacaatcttgtgaaggtctacagtcacggcaaaaagctagcggtcgatgggttgaca
cttggcttctatgaggggcagataacctcgtttctaggtcacaatggagctggaaaaacc
acgaccatgtctatcttaactggccttttccctcctacctctggcactgcttacatcatg
ggcaaagacattcgctcagagctgagttctatcaggcagagccttggagtgtgtccacaa
cacaatgtcctcttcagcatgttgaccgtagaagagcacatctggttctatgcccgtctg
aagggtctgtctgaggagaaagtgaaggctgagatggagcagatcctgaatgatactggc
cttccacataaacgcaaatccaggaccagccagttgtcaggtggtatgcagaggaaactc
tctgtagcccttgcttttgttggagggtcaaaggttgtcattctggatgagcctaccgct
ggtgtggatccatacgctcgtagaggcatctgggaccttctcctgaagtatcgtgccggt
cggactatccttctttccacccatcatatggatgaagcagacattctgggtgatcgtatt
gccatcatctcccatggaaaactttgttgtgtgggctcctcgctgtttctgaagactcaa
ctgggaactggatactatcttaccttggtgaagaaaaacaatgaaccttctctcagttct
tgcaggaactcgagcagcacagtgtctttcattaagaaagatgacaatgcatccgagagc
agttcagatgctggtcttggtagcgaccaagagagcgaagctgccacagcgattggaact
acttggcctgaatctcctgttgttcctgttgatgtggccctcatctccagtctaatcctg
aagcatgttcctgctgcccgcatggtggaagacctcggtcatgagatcacatatgtgttg
ccttatgagtctgccaaagatggtgcttttgttgagctcttccatgatctggatgatcgg
cttgctgaccttggcatttcgagctatggtgtctcagatactacacttgaagagattttc
cttaaagtggcagaggacagtggagttgacacagaaatcatctcagatggaactgtgcct
gtgcgtagacatagacgacatgcatttggcggtgaccaccagagctgcctcaaacccctg
accgatgacgatgactttgagtgcaatgaatctgatgttgatccagaatccaaagagaca
gactatttgagcgtggctgatggaaaaggatcatatcaggtgaaaggctggagtttaaag
aggcagcagtttgtggcgttattatggaagagatttctttatgctcgccgctcaaggaaa
ggcttctttgcacagattgttcttcccgctgtgtttgtgtgcattgctctggtattcagt
cttattgtgccaccatttgggaaatatcccagcctggctcttaacccctggatgtatgaa
gaacaattcacattcatcagtgatgatgctccacatgatataagcacacaaaaattactc
aacgccttattagatgatcccggctttggaacgcgatgcatggaaggagaaccaattcct
gaggctccctgtacaatgggcgaagaggaatggtctacaccagaagtggcagaaagcgta
atggacattttcacaacgacaaactggaccatgcacaacccatcgcctgcttgtgagtgc
agctgtaatggcaaaaagaagatgctcccagaatgccctgccggtgctggtggactgcca
cctcctcagattaagatcagtgaaactgagaccctccagaacctgacaggacgaaacatc
tcagactatctagtgaagacctatgcacaaatcattgggaaaagcttaaagaacaagatc
tgggtgaacgaattcagatatggaggattttcactgggtgctagaagcactcaggtactt
cctcctgctgaggagatcgatgatgccatctctcgagtcagggatatcttccaactggga
aaggactctggatcagcgcccgaccgtttcttgaaaagcctgtctgccttcatcaatggg
ctggacactaagaataatgtcaagatatggttcaataacaagggctggcacagtattgga
gcctttctcaatgtaatgaacaatggtattttgcgtgccaacttaccacctggcaaagac
ccccgtcagtttggcatcactgcgttcaaccatccgctcaatttgaccaaagaacagctt
tctcaagttgccctgatgactacctcagtggacgtgctggtttccatctgtgtgatcttc
gccatgtccttcgttcccgccagctttgttgtctttctcattcaggaacgagtgaataag
gccaagcatatgcagtttatcagcggagttcagccatacctttactggttggctaacttt
ctctgggatatgtgtaattatgtcgttcctgctactctggtgatcctgatttttgtgtgc
ttccaacaaaaagcctacgtctccgccaccaacttgcctgttcttgctcttctgctgctt
ttatatggatggtccatcactcctctcatgtacccagcttctttcctcttcaaaatcccc
agcactgcttatgtggttctcactagcgtcaacatcctcattgggatcaatggcagcgtg
tccacttttgtcatggagttatttggaaataacgagattggtggcattaacgacatcctg
aagaacgttttgctcatcttcccacacttctgcctgggtcgaggtctcattgatatggtg
aagaatcaggcaatggctgacgctctagagagatttggtgagaaccgtttccgttctcca
ctggagtgggacatggtgggcaagaatctttttgctatggctgtggaaggagcggtattc
ttcatcatcacagtccttatccagtaccgtttcttctttgaacccaagtctttaagtacc
aagttgagtccgattggagaggaagatgaagatgtggccagagagaggcagaggatcatg
agtggagctggacaaggagatattcttgaactccgacaactcactaaggtgtacaaacgg
aaacagaagcccgctgtcgatcgtctatgtgtgggaattcctccaggagagtgttttggt
ctgcttggtgtcaacggagctggaaagactagcacttttaaaatgctgaccggagactct
gtggtcagcaaaggagaagcattcttagctgggaaaagtatactcagagaaattgatgaa
gtacatcaaaacatgggctactgccctcagtttgatgccatcaatgatctgctgacagga
cgggaacatttggaattctacgccatcctgcgcggtgtacctgagaaggaagtctgtgag
gtggcagagtggggaatccgtaagctgggtctcgtgaaatacgtggacaaaaaggctgga
agctacagcggtggcaacatgcgcaaactctccaccgccatatcactcattggagcccca
ccagtggtcttcctggacgagcccaccactggaatggaccccaaagcacgacgagcactg
tggaactgcatccacagcgtcatcaaagagggacgctccgtcgtgcttacctcacacagc
atggaagaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggcaggttccgc
tgtctgggtagtgtccagcacctgaagaacagatttggcgatggatacaccatcattctg
agggttgcagggccagatcctgacctgcagccggtgatgaagttcattgagtgtgagctg
ccgggcagcaccctaaaagagaaacacagaaacatgctacaataccagcttccctcctcc
ctcacctccctcgctcacatcttttgcatcctcgctaagaacaaagagtttctcaggata
gaggactactcggtgtcccagaccactctggaccaggtatttgttaactttgccaaggac
caaagtgatgaccactcggacagctccattcgtcgtaaagagacagcggtgaacatggcc
ctccttagtcctctgtctactaaagagaacatggagaagccaatagaaagctttgtgtga
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integrated database retrieval system
