Megalobrama amblycephala (Wuchang bream): 125259534
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Entry
125259534 CDS
T08212
Symbol
soga1
Name
(RefSeq) protein SOGA1 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mamb03036
]
125259534 (soga1)
Chromosome and associated proteins [BR:
mamb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
125259534 (soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
TSC22
Motif
Other DBs
NCBI-GeneID:
125259534
NCBI-ProteinID:
XP_048033152
LinkDB
All DBs
Position
LG24:complement(31063570..31125994)
Genome browser
AA seq
1775 aa
AA seq
DB search
MTKTKVDTGSPTHFVSSKEKRQKQKMESSTGEQEQPPAQPPQVNEKKKIHRAPSPARPKD
VPGWSLTKIRGGIGTPTLSVKPGAIYLGGRVSRRSPVTGKETKTEKSKPTGKPALSAAGA
QKSSAKSNKSGRRKVSDASIGSDDLSKDSGCAPGKLSPTDSSSELSDCVSEENKVSTDAL
SSDTETSSRGGIDGDKSAAEHGLLDKSGQTKTSVEKDRLSLGVETAEGSVSPGDERSLTS
FDSRMPASTSLAFSDLTEELMDGMHEELIREIEELRSENDYLKDEMEELRSEMLEMRDMY
LEEDVYQLQELRQQLDQANKTCRILQYRLKKAERRSIRVAQTGQVDGELIRTLEQDVKVA
KDVSIRLHNELDTVEKKRSRLEQENEELRVKLQDLEVAKQVLQAEMEKARENSLKKRGAR
PNNKPDKKASPQPPEDSSDLKCQLHFAKEESALMCKKLTKMVKDNEAMREELAKYRSVYG
EVDASLTVEEVADSPHTREAEVKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMKIQ
DTPGGVGVMGGVGSHLLLSTSENVMELQRHLQFVEEEADLLRRSLIEMEEQNKLLMNEIN
HYKSELPAVTEIEPSSSTTISSPKIIPGASEEGESGLNEATHKELLAARLQIAELNGKVK
KLQYENRVLLSNLQRCDLASNQGSARPALETDAEAGDSAECVPSQVHREGPVGDEQNDIL
EEKNPKVSVTSHTPTAQGLNIKDLLAIRDQAQLITSAIQLLTSPDPSSITPDAVYRKITT
NESAEPVLLEKSQTQSSTLPLVEALHGRLQSLQAQLQALSERVDALGQPPERERVEGMSL
MPLLSEAEDPAANCSCPADAQFNQNMAQQKPDSRDQPCKAEEERNSHKDSNKDEESDLKE
TDSDLLTEQVGELHALLSEAREKAQGAQEALSQERQERHNDTHKLSQLQEEHQKALLRRD
FQLQSLSLQTRLQQKLWSQERNLLVQESQQLKESLLLIGLKLRWLLKQWRLGKKLDTESK
DILEVNSVKDLRILLEEDGLSSHYGDNKMSAAEEQPLNPTPKEHSLAEKSCPQQPSGFGS
TLSDLKVALQDLSAELREERQSSQELTQQFARAKASWEVERMELKSIITQLEGKMGKASV
AGGEKDSPDLKGALKKEREEHQHLLADSYAAVMDLTKQLQISEKNWSRERLELLEHFNQE
RSQWEQRIRDAQSKGAQSLHDKMSEKETLADVATSSSALQRTKSVSALSEFKSLLDTSLF
LPGHMISGVKECNVVQHQSTAPASILARTDLSDLNKKNWKYLTSDSAILEKGDQFKTWDC
PSTNSNSSFPGLELSKEYIQRSYTAPDKTGIRIYYSPPTVRRMESRPVKEKSHPDPQQGL
SSRDAAMIDLSGQTAVSAPLSATSSSSYEQWLSSLSQQHRDLLEGRTGGSAPFHGLEISG
NLSDDMKEMTNCVRQAIRSSSLERKCSKDTGSQTVGVSSTGTQTAQFVSIGLQTDGPIST
TRGLPGKAWSPRPSTSLASARSRQISSSLEKVHSRIDRPCCSPKYGSPKLTRRVSTSSSK
LETSSTSSRDRSVWNLHNRSGSQNGSAWARSTTTRDSPVLSGLNDGLTSLFSVVEHSGSV
ESLWKADPCPERQAAGKPSCPSIGIGLGEAGAQKYGMVQEFLRNVCGRTAPAGTMDEPKP
ECLPGALISTDNITKIVNKRFMKTQRDELVPTGKDAVSSSSSTLEDSVCDCNSQTITSCF
ARHSRSTTRHTHGQCKHRVQESSMGTEERFDTSNE
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacaaaggttgacaccggttccccgacgcattttgtctcgtcgaaggagaag
aggcaaaagcagaaaatggagagcagcaccggcgaacaagaacagccgcctgcgcagccg
ccacaagttaacgagaaaaagaaaatacaccgggcaccgtctccagcaagacccaaagat
gtgcccgggtggtccctcactaaaatacgcggaggtatcggcacaccgacgctgagcgtt
aaaccgggggctatatatttaggcggccgcgtgtccagacgcagcccggttaccgggaag
gaaacaaaaacagagaagagtaaaccgaccggcaagcctgcgctatccgcggccggtgct
cagaagagcagcgccaagtctaataaaagcggtcgaagaaaagtttcggacgccagcatc
ggatcggatgatttaagcaaggactccggctgcgctccggggaaactctcacccaccgac
agcagctccgagctctccgactgcgtctccgaggagaataaagtctccacagacgcgctc
agcagtgacaccgagaccagcagccgcggggggatcgacggcgataaatcggcagcagaa
catggactattggacaagagtggccaaaccaagaccagcgtggagaaagaccgactctcg
ctgggagtggagaccgcggaagggagcgtctctcccggcgacgagcgctccctcacctcg
ttcgacagcaggatgcccgccagcacatccttggcgttctcggacctgactgaggagttg
atggacgggatgcatgaggaattaatcagggaaatagaggaactcaggtcggaaaatgat
tatttaaaggatgaaatggaggagcttcgctctgagatgctggagatgagggacatgtac
ttggaggaggatgtttatcagctccaggagctcagacagcagttggatcaggccaacaag
acctgccgcatcctgcagtaccgcctcaagaaggcagagagacgcagtatccgcgtggcc
cagaccggacaagtggatggggagcttatccgcacactggagcaagacgtcaaggtggca
aaggacgtgtccatccgtctccacaatgagctggacactgtggagaagaaaagatctcgt
ctggagcaggagaacgaggagctgagggtgaaactacaggatctggaggtggccaagcag
gtcctgcaagctgagatggagaaggccagagagaactctttgaagaagagaggtgccaga
ccaaacaacaaacctgacaaaaaagcatcgcctcagcctccagaggacagttcagacctg
aagtgccagcttcacttcgccaaggaggaatcggctctcatgtgcaagaaactcaccaag
atggtcaaagacaatgaggccatgagagaggaactggcaaagtatcgctctgtgtacgga
gaggttgatgcctcacttactgtcgaagaggtcgctgattctcctcacacccgagaagcc
gaggtcaaagtacacctgaaacttgtggaggaggaggcgaaccttctaagtcgacgtatc
gtagagttggaggtggagaaccggggccttcgcgccgaaatggacgacatgaagatccag
gataccccgggtggagtcggcgtcatgggtggagtcgggagtcacctgctgctttccacg
tctgagaatgtaatggagctacagcgccatctacagtttgtggaagaagaggcagatctg
ctgcggcggtctctgatagaaatggaagagcagaacaagctcttgatgaacgagatcaac
cactacaagtccgagcttcccgctgtcactgagatagagccatcatcgtccacaaccatc
agttcacccaaaatcattcctggtgcttccgaagagggagaatccggtctaaacgaagcc
acccataaagaactgcttgctgcccggctgcagatcgcagagctgaatggcaaagtaaag
aagctccagtacgagaaccgcgtgcttctgtccaaccttcaacggtgtgacttggcctcc
aaccagggttccgcacgtccagcgctggaaaccgatgctgaagcaggggactcggctgag
tgcgtcccaagccaggtgcaccgtgaaggcccggtgggcgatgagcagaacgatattctg
gaggaaaagaatccaaaagtttcagtaacaagtcacactcctactgctcagggcctcaac
ataaaagaccttctcgctatccgcgaccaagcgcaactcattacctcagccattcagctc
ctgacttcacccgacccctccagtatcacaccagacgccgtctatcgtaagattacaaca
aatgagtctgcggaaccggttctgctggagaagagccagacccagagctccacgctgccc
ctggtggaggccctgcatggcagactgcagtccctccaggctcagctacaggccctcagt
gagagggtggatgccctggggcagcccccagagagggagcgtgtggaagggatgtccttg
atgcccctgctgtctgaagcggaagaccctgcagcaaattgctcatgccctgcagatgct
cagttcaaccagaacatggcccaacagaagcctgactctagagaccagccgtgcaaggca
gaggaggagaggaacagccacaaagacagcaacaaagacgaggaatctgacttaaaggaa
acagactctgatctgctgacagagcaggttggggagctgcacgctctgttgtccgaggca
agagagaaggctcagggagcgcaggaagcgttgtcacaggagagacaggagcgccacaac
gacacacataaactctctcagcttcaggaagagcatcagaaggccctcctccgccgagac
ttccagctgcagagtctgagcctccagacgcgtctgcagcagaagctgtggagtcaggag
agaaacctgctggtgcaggagtcccagcagctcaaagagagcctgctcctcatcggcctc
aagctgcgctggctcctcaaacagtggagactcggcaagaaactagacactgagagcaag
gatatcctagaggttaacagtgtcaaagatctccgtatcctgcttgaggaagatgggttg
tcttcccactatggagacaacaagatgtctgctgctgaggagcaaccactcaaccctaca
cccaaagagcacagcctggcagagaaaagctgcccgcagcagcctagcggattcggcagt
actctgtcggacctgaaggtggcgctacaagatctgagcgctgagctgcgcgaggagcgt
cagagttcacaggagttaacgcagcagtttgcccgtgccaaagcatcatgggaagtggaa
cggatggaactcaagagcattatcactcagctggagggtaagatggggaaggcatctgtg
gctgggggtgaaaaggactctccagacctcaagggggcgctaaagaaggagcgagaagag
catcaacacttattagcggactcttacgctgctgtgatggacctcaccaaacaactgcaa
atcagtgagaagaactggagccgagagaggctggagcttttggagcactttaaccaggaa
agaagccaatgggaacaacgtatacgagatgcccagagcaaaggcgcacagtctcttcat
gataaaatgtctgagaaggaaaccttagcagatgtagccacgagcagttcagcactgcaa
aggaccaaatcagtttctgccctctctgaatttaagagtctgttggacaccagtctgttc
cttcctggtcacatgatcagtggagtaaaagagtgcaatgttgttcaacaccaatctacc
gctcctgcctccattctggctcgcaccgacttaagtgatctcaacaagaagaattggaag
tacctgaccagtgattcggcaatattggagaagggtgaccaatttaagacatgggactgc
ccaagcaccaactctaacagcagcttcccaggactggagctgagcaaggaatacatccag
agaagctacaccgctccagataagacgggtattcgtatctattacagccctccaacagtg
cggagaatggagagtaggccagtcaaagaaaagtcccacccggatccccagcaaggacta
tcatctagggatgcagccatgatagatctatcaggtcagactgctgtatctgcaccctta
tccgccacttcttcctcctcttatgagcagtggttgagctcactttcacagcagcacaga
gacctgcttgaaggacggacaggaggttctgcaccattccatggactagaaatttcaggc
aaccttagcgatgacatgaaggagatgacaaactgtgtacgacaggccattcgttccagt
tccctggagaggaagtgcagcaaagatactgggagccagacagttggtgtttctagtaca
ggaacgcagacagcacagtttgtcagcattggcctacaaactgatggccctatttcaaca
actagaggccttccagggaaagcatggtctcctcgtccatccacctcacttgcatccgca
cgttcccgacagatctcttcatctctggagaaagtgcacagtcgcatagatagaccctgt
tgctctccaaaatatggctcacctaagctcacccgcagggtctccacctcctcctcaaaa
cttgagacctcctcaacatcctcgagggatcgcagtgtctggaatctgcataaccgtagt
gggtcccagaacggttctgcctgggcacgttccaccaccacacgtgacagcccagtgctt
agtggcctaaatgatggcttgaccagtctcttcagtgtggtggaacactccggaagtgtt
gaatcattatggaaagcagatccgtgcccagagagacaagccgctgggaaaccttcttgt
cctagcataggtatcggtctgggagaagcgggagctcagaagtacggcatggtccaggag
tttcttcgaaatgtttgcggcaggactgcaccagcgggcacaatggacgaaccaaagcct
gaatgcctacctggagccttgatcagcacagacaatatcacgaagatcgtcaataagcgg
tttatgaaaacacaaagggatgagttggtacccaccggaaaggatgcagtgagctcaagc
tctagtaccttggaggattcagtttgtgactgtaactcacaaaccatcacgtcctgtttt
gcccgccactcccgctccaccacacgacatacccatggccagtgcaagcatcgagtgcaa
gagtcatccatgggaactgaagaacgattcgataccagtaatgagtga
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integrated database retrieval system
