Megalobrama amblycephala (Wuchang bream): 125259603
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Entry
125259603 CDS
T08212
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125259603 (scn8aa)
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
125259603 (scn8aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
ATP-synt_B
IQ
GPHH
Neur_chan_memb
UPF0029
Motif
Other DBs
NCBI-GeneID:
125259603
NCBI-ProteinID:
XP_048033294
LinkDB
All DBs
Position
LG24:18926332..19002446
Genome browser
AA seq
1961 aa
AA seq
DB search
MAAPLLAPPGPDSFKYFTRESLCEIEKRIAEEKAKPPPKPDSSYRDDDDENKPKPNGDLE
AGKSLPFIYGDIPPGMVATPLEDLDPFYVNKKTFIVLNRGKTIFRFSATPALYMISPFNL
ARRIAIKILIHSVFSMFIMCTILTNCVFMTFSNPPEWSKQVEYTFTGIYTFESGVKIIAR
GFCIDDFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTI
VGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINITEMYPNSNGSHA
FNWDEYIMNETNFYFLPDQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYDYTSFDSFGWA
FLALFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAERKEAEFKAMLEQLKKQQEDAQANAMATSAGTVSEDAVEDDGEGGGNLSCSSSE
MSKLSSKSAKERRNRKKKWRQKEQDKEKGDSEKFVKSESDDGSRRSRFRFPDNRLGRRSS
IMNQSLLSIPGSPFPSRRNSKSSIFSRCKDGGSENEFADDEHSTVEEYDERRDSFLSPQR
RSSYTGYYGKRNSTVDCNGVVSLIGPGPGGRLLPEVIIDKAATDDSQTTDLEIKKKLSGS
LMVSIEQLNTSFGRKERANSVMSALTNTLVEELEESQRKCPPCWYKFANIFLIWDCGPVW
MRIKEIVNMIVMDPFVDLAITICIVLNTLFMAMEHYPMTEQFEHVLSVGNLVFTGIFTAE
MFAKLVAMDPYYYFQEGWNIFDGIIVSLSLMELGLADVEGLSVLRSFRLLRVFKLAKSWP
TLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISQDCVLPRWHM
NDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSS
FSADNLAAPDDDGEMNNLQIAVIRIKKGIAWVKLKVREVVNIILGRKVTDEAKPLDDMYD
RKLNCIANHTGVDISRDLDYQKNGNGTTSGIGSSVGKYMIDDDHMSFIHNPNLTVCVPIA
VGESDFENLNTEDFSSESEAEGSKELDDISSSEGSTIDIKPEVEEAVVVEAVEEYVDPEA
CWTEACVARYKCCDVPITEGWGKSWWWLRKTCYLIVEHNWFETLIIFMILLSSGALAFED
VYIEQRKTIRVILEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSL
IANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWL
IFSIMGVNMFAGKYYYCYNETEKAYFDPDTVNNKTECLELMNQNFTEVRWKNVKINFDNV
GAGYLALLQVATFKGWMDIMYAAVDSRKVEDQPKYEDNIYMYIYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKLQGMVFDFV
TQQVFDISIMILICLNMVTMMVETDDQSPETENILYWVNFIFIVAFTSEFVLKLFALRHY
YFTNGWNIFDCVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRT
LLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKREAGIDDMYNFETFGNSMICLF
MITTSAGWDGLLAPILNYPPDCDPNKENPGTTVKGNCGNPSVGIFFFVMYIIVSFLIVVN
MYIAIILENFSVATEESADPLCEDDFESFYEIWEKFDPTASQFITFAKLGDFADTLEHPL
RVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGDLDMMRQQMEERFIAANPS
KVSFEPITTTLRRKQEHMSASVIQRAYRAHLIRRGFICKRLLSSSRLENGGTNQEKKEST
PSTASLPSYDSVTKPEKEKLEESDSKGKKGKNQKDVKESKC
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgacagcttcaaatactttaccagggaa
tctctgtgtgaaatcgagaagcgcattgctgaggagaaagccaagccgcctcctaagcca
gacagcagctaccgcgacgatgacgacgagaacaagcccaagcctaacggtgacctggag
gcgggcaagagcctgcccttcatctacggggacatccctcctggcatggtggcaacgcca
ctggaggatttagatcccttctacgtgaataagaaaacatttatagtcctaaatagaggg
aaaacaatcttccgctttagtgccacacctgccttgtacatgataagcccttttaatctt
gccaggcgaatagcgattaaaattttgatacattcagtattcagcatgttcattatgtgt
acgattttgaccaactgtgtgttcatgacctttagtaaccctcccgagtggtccaaacaa
gtagagtataccttcactggaatttatacgtttgaatcaggtgtaaaaatcattgcccgt
ggattctgtatagatgacttcacattccttagagatccatggaactggctggatttcatg
gtcatctcaatggcatatgtaacagagtttgtggacctggggaatgtatctgcgctgaga
acattcagagttctccgagcattgaaaactatctctgtcattccaggtctgaagaccatt
gttggcgctttgatccagtcggtgaagaagctgtcagatgtgatgatcctcaccgtgttc
tgcctcagtgtctttgccctcattggtctgcagctcttcatgggaaatctgcggcacaag
tgtgtcatctggcccatcaacatcacagaaatgtaccccaatagcaatggcagccatgca
ttcaactgggacgagtacatcatgaatgagaccaatttctacttcctgccagaccagttg
gatgctcttctatgtggaaacagctctgattcaggtcgctgtcctgaaggctacacatgc
atgaaggctggtcgcaatccaaattatgactacaccagctttgacagttttggctgggct
ttcctggctctcttccgcctcatgacgcaggacttttgggagaacttgtaccagctgacc
ctgagagcagcagggaagacctacatgattttctttgtgctggtaatctttgttggatcg
ttctaccttgtgaatctgatcctggctgtggtggccatggcatatgaggaacagaaccag
gccactatggaagaggcagagcgaaaggaggcggagtttaaagccatgctggaacagctg
aagaaacagcaggaggacgcgcaggctaatgctatggcaacgtcggcggggacggtgtct
gaggacgcggtggaggatgatggtgaaggaggtgggaacttgtcctgcagctcatctgag
atgtctaaactcagttccaagagtgccaaagaacgacgcaaccgcaagaagaagtggcgg
cagaaagagcaggacaaggagaaaggggacagtgaaaagtttgtcaaatctgaatcggat
gatggaagcaggaggagcagattccgtttccctgacaaccgtttagggcgtaggagttcc
ataatgaaccagtctctgctcagcatcccaggctcaccattcccctcaagacgcaacagt
aagagcagcatcttcagccgctgtaaggacggaggctcggagaacgagtttgcagatgat
gagcacagcacggttgaggagtacgacgagaggcgtgattcattcttaagcccgcaacgt
cgcagcagctacacgggttactacggcaagcgcaacagcactgtggattgcaatggagtg
gtctctctcatcgggccggggcctggcggacgcctactgcctgaggtgataatagataag
gcagccactgatgacagccaaaccactgatcttgaaatcaagaagaaactctcaggctct
ctaatggtttccatagagcagcttaacacatcgtttgggcgcaaggaacgagccaacagc
gtgatgagtgcgttaaccaacacattggttgaggaactggaagagtctcagaggaagtgt
ccaccatgctggtacaaattcgccaacatatttcttatctgggattgtggccccgtttgg
atgaggattaaggagattgtgaacatgattgtgatggacccttttgtggacttggctatc
accatttgtattgtgctgaatactctcttcatggccatggagcattaccctatgacggag
caatttgagcatgtgctaagtgtcggaaacctggtgtttactggtatcttcactgccgaa
atgtttgccaaactggttgcaatggacccatactactacttccaggagggctggaatata
tttgatggcatcattgtgagcttgagtttgatggagttgggcttggctgatgtggaaggt
ctttctgtgctgagatccttccgattgctgagagtgtttaagctggctaagtcatggccc
accctcaacatgctgataaagatcattggtaactcagtaggagctttggggaacttgacc
ctggtgttggccatcatcgtcttcatctttgccgttgtgggcatgcagctgtttgggaag
agctacaaggactgtgtgtgtaagatctctcaggattgtgtgcttccccgctggcacatg
aatgacttctttcactctttcctaattgtgttccgggtgttatgtggagagtggatcgag
accatgtgggactgtatggaggtggctggacaggccatgtgtctcatcgtcttcatgatg
gtcatggtcatagggaatttggtggtcttgaatctgttccttgccttgttgctgagctca
ttcagcgcagacaacttggcagctcccgatgacgacggtgagatgaacaacctgcagatt
gcagttatccgcattaagaagggaattgcctgggtgaagctcaaagttcgagaagtggtc
aacatcatcctcgggaggaaagtcaccgatgaggccaagccactagacgacatgtacgac
cgaaagctaaactgcatcgccaatcacacgggcgtggacatcagtcgtgacctggattat
cagaaaaatggcaacggaaccaccagtggtatcgggagtagtgtgggcaagtacatgatt
gatgatgaccacatgtccttcatccacaaccccaatctgacagtatgtgtgcctatcgct
gtgggcgagtctgactttgagaatctcaacactgaagatttcagcagcgagtctgaggca
gagggcagcaaagaattggatgatatcagctcatcagagggcagcaccatagatattaaa
ccagaggtagaggaagcagtggtggtggaggcggtagaggaatatgttgacccagaagct
tgctggaccgaagcttgtgtggcccgatacaagtgttgtgatgtgcccatcacggagggc
tggggaaagagttggtggtggctccgtaagacctgctatctcattgtggagcacaactgg
tttgaaaccctcatcatctttatgatcctcctcagtagtggagcattggcttttgaggat
gtgtacattgaacagaggaagactattcgtgtcattctggaatatgctgacaaggtcttt
acctacatcttcatattggagatgttgttaaagtgggtagcctacggttttgtcaagtac
ttcaccaacgcttggtgctggctggacttcttcattgttgacgtgtctatagtcagcctt
atagctaatgcgctgggctactccgatctagggcccattaaatcactcaggacactaagg
gccctgagacccctcagagcattgtcacgttttgaagggatgagggtggtagtcaacgcc
ttggtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttggctg
attttcagtatcatgggcgtcaacatgtttgcggggaagtactactactgctacaatgag
accgaaaaggcgtacttcgatcccgatacggtcaacaacaaaacagagtgcctagaattg
atgaaccagaacttcactgaggtgcgctggaagaacgtcaaaatcaactttgacaatgtg
ggcgctggttacttagctctactgcaagtggcaacctttaaaggatggatggacatcatg
tacgcagcagtcgattcgcgaaaggtggaagaccaaccaaagtatgaagacaacatctac
atgtacatctattttgtcatctttattatattcggctctttcttcaccctcaacctcttc
attggtgtcatcatcgataacttcaaccagcaaaagaaaaagtttggaggtcaggatata
ttcatgactgaggaacagaagaagtactacaatgctatgaaaaagcttggctcaaagaaa
cctcagaaacccatacccagaccccagaacaagctccaggggatggtgtttgactttgtg
acacagcaggtctttgatatttccatcatgatccttatctgtttgaacatggtcaccatg
atggttgagacagacgatcagtcaccagagaccgaaaacattttgtactgggtcaacttc
atcttcattgtggccttcacctctgaatttgtcctgaagctctttgcactgcgtcattat
tacttcaccaacggctggaacatctttgactgtgtcgtggtcattctctctatcgtgggt
atgttcctggctgacctgattgaaaagtactttgtgtcaccgacgttgttcagggtaatc
cgtctggctcgaattggacgtatcttgcgtctgatcaaaggagcaaagggcattcggact
ttactgtttgccctgatgatgtcactgccggccctgttcaatatcggccttctgctgttc
ttggtcatgttcatcttttctatcttcggcatgtcaaactttgcctatgtgaagcgggag
gctggcatagatgacatgtataactttgaaacatttgggaatagtatgatttgcctgttc
atgattaccacctcagcgggatgggacggccttctcgctcccattctcaattacccacca
gattgcgatccgaacaaggagaatccaggtactacggtgaaaggtaactgtggaaaccct
tcggtgggcatcttcttcttcgtcatgtacatcattgtctcatttctcatcgtggtaaac
atgtacatcgccatcattctggagaacttcagcgtcgccacggaggagagcgctgaccca
ctttgtgaggacgactttgagtccttctacgagatctgggaaaagtttgaccccactgct
tcccagttcatcacctttgccaagctgggtgacttcgctgacactctggagcacccgctg
cgcgttcccaagcccaacactatagagctgattgccatggacctgcccatggtgagcggc
gaccgcattcactgcctagacatcttgtttgccttcaccaaacgcgtgctgggcgatagc
ggcgacctggacatgatgcggcaacagatggaggagcgattcattgctgccaatccttcc
aaagtgtcttttgagcccatcaccaccactctgcggcgcaagcaggagcatatgtctgcc
tcagtcatccagcgtgcttaccgtgcccatcttattcggagaggcttcatctgcaagcgc
ttgctcagcagcagcaggctggagaatggcgggaccaatcaggaaaagaaagagagcacg
ccttctactgcctcgctgccgtcctacgacagcgtgaccaaacctgagaaggagaagttg
gaggagagtgacagcaagggcaaaaagggcaaaaaccaaaaagatgtcaaggaatctaag
tgttag
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