KEGG   Megalobrama amblycephala (Wuchang bream): 125260046
Entry
125260046         CDS       T08212                                 
Symbol
per1a
Name
(RefSeq) period circadian protein homolog 1a
  KO
K21944  period circadian protein 1
Organism
mamb  Megalobrama amblycephala (Wuchang bream)
Brite
KEGG Orthology (KO) [BR:mamb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mamb03400]
    125260046 (per1a)
DNA repair and recombination proteins [BR:mamb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    125260046 (per1a)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 125260046
NCBI-ProteinID: XP_048034130
LinkDB
Position
LG2:complement(44438377..44452398)
AA seq 1407 aa
MSNDNFQTPVSCVTSTEKGATHKDERETYRDASPGMTDSQSVRPGLDISTVPEPTHSDDT
DAHSSGNDSAERESEGHMGRDASTCSSHNGKGSTTETTESKSSNGNSPSPPSSSVSYSLL
SGSSEQDHLTSQAASGDQPARLQTQRELLNALRELKLRMPAERRRKGRSSTLASLQYALS
CVKQVRANQEYYHQWSVEESHGCCLDLSSFTIEELDNITSEYTLQNTDTFSVAVSFLSGK
VVYISSQAASLLRCKPERLQGALFSELLAPQDVSTFYSSTAPSRLPPWSSCAGTTSQVDC
AEEKSMFCRISRGRDSDGEVKYYPFRLTPYQLTLRDSDTSQPEPCCLLIAEKVHSGYEAP
RIPADKRIFTTSHTPNCLFQEIDERAVPLLGYLPQDLVGKPVLIYLHPEDRLLMVAIHKK
ILQFAGQPFDHSPLRMRARSGEYLTLDTSWSSFINPWSRKVAFIVGRHKVRTSPLNEDVF
TAPEGEEVKTMSPDVPQLNELIHRFLVQPIHGGSSQGYGSLGSSGSHEHHQSAASSSESN
GHASEDQIKPRKPMTFEQICQDMHMVKASGQQVFIESRNRPPALKQGSLEALAKAADTAE
ASTREGLAGLALSSPPRMELPTTYSYQQINCLDSIIRYLESFNVPGTVKRKCGSSSCTTS
STSDDDKQRDRDGGGATEDIAETHVVTEGSKVVPAAPGHPLTPLALHCKAESVVSATSQC
SFSSTIVHVGDKKPPESDIVMMEEPPTTPTPSTSAPLTAVASPMPVNPQQTSSPTAAVPE
KEKEKERRGGTSAGKGLTKAVLSTHTQQEEQAFLNRFRDVSQLRMVQPSGPPQLRSTSTP
GTKVVNSSQNYPSVGNGNSRRHGRGGKRRKHQVDGNIPDIPSLSGSGPYRGSNPAAIRPN
IPSVQHSSTSWPPPAASQTSGAPMMTSFPPGYMPMFPISSPFLMPQMGTDPSLQAGVPRF
PMQGFPPVMPPVMTFMMPNYMFPQLGNPGPQLNPANLQLSGQMPAQMNPLGQFPCSIVQM
NPGDQSFNPAIGQFNPLGSQMNPTMPAVIPQQFYNPNPPFIFPNSPSMPAGNANTTTHGQ
SRSSTPQSTGQQAGEREGAGSPLFQSRCSSPLNLLQLEELPSNRTDATQQTPPPGGGATQ
GGGIVVQNSSNRSNTKDAKLNNSHEVNESNQDAMSTSSDMLDLLLQEDSRSGTGSAASGS
GSSGSGSGSFASGSNGCSTSGSGTSGSGTRSSNTSKYFGSIDSSENDHTHKPASGDLEGE
QFIKFVLQDPIWLLMANTDDKVMMTYQIPIKDRDSVLKEDRDALKAVQKHQPHFTEEQTK
ELTQVHPWIQTGCLPKAINITSCTGCESPPDSSILPPFDLDFHEMDLSMVLREEAKQDKL
TTAETAFPLSPPSSDNEQKDNQASSST
NT seq 4224 nt   +upstreamnt  +downstreamnt
atgagtaatgacaattttcaaacacctgtgagctgcgtcactagtactgagaagggagca
acacataaggatgaaagggaaacctacagggatgcttctcccggaatgactgacagccag
tctgtccgtcctgggctggacatctcgacagtgcctgagccgacacactcagacgacact
gatgcccattccagcgggaatgactcggccgagagggagagcgaaggacacatgggaaga
gacgcatccacctgcagctctcacaatggcaagggttcaaccacagagactacggaaagc
aagagctcaaatggaaacagtccatcacctcctagcagctcggtgtcatacagtcttttg
agtggcagctcggagcaggatcatctgacctcccaagcagccagtggtgaccagccggcc
cggctgcagactcagagagagctgctgaatgccctgcgtgagctaaagctccgcatgccg
gcggaacggcgtaggaagggccgatctagcaccctagcctccctgcagtatgcgcttagc
tgtgtcaaacaagtgcgggctaatcaagagtactaccatcagtggagtgtggaagagagc
catgggtgttgtttggacctgtcatcgtttactattgaagagctagacaacattacatcg
gagtacacccttcaaaacacggacactttctctgtggcagtgtcgttcctctctggtaaa
gttgtgtacatctcatcccaggcggcctctctgctgcgctgtaaacctgaaaggctgcaa
ggggcgctgttttcagagctgctcgcgcctcaggatgtcagcaccttttacagcagcacc
gcgcccagccgcctgccgccatggtcctcctgcgcaggcaccacttcacaggtggactgt
gccgaggaaaagtcgatgttttgtcggatcagcagaggtagagacagtgatggagaagta
aagtattaccccttccgtctcacgccatatcagctgaccctgagggactccgacacgtcc
caacctgagccctgctgcctcctcatcgctgagaaagttcattctggctacgaggcacct
cgtattccagcagacaaaagaatttttaccaccagtcacaccccaaactgtctgttccaa
gaaattgatgaaagggcagtgccattacttggttacttgcctcaggacttggttgggaaa
ccggtgcttatttacctgcatccagaagacagacttcttatggtggccattcacaagaaa
attctccagtttgcagggcagccgtttgaccactcgcccctgcgtatgcgtgcacgaagt
ggggagtacctgaccctcgacaccagctggtcatcctttatcaacccctggagcaggaag
gtggctttcatagtggggcggcacaaagttcgaactagtccattgaacgaggacgtgttc
actgccccggagggcgaggaggtgaaaaccatgtccccagatgtgccgcagctgaacgag
ctgatccacaggttcttggtgcagcccattcacggtggcagctcacaggggtacggaagc
ctgggcagcagcggctcacacgagcaccaccaaagtgccgcttcctcctctgagagtaac
ggacatgcttctgaggaccagatcaagcctaggaaaccaatgacatttgagcagatttgt
caagacatgcacatggtaaaggccagtggacagcaggtcttcattgaatcccgaaaccga
ccaccagctctcaaacagggtagcttagaagcactggcaaaggcagcagacacagcagag
gcctctactagagaaggtctggcaggtttagcactgtccagtccacccaggatggagctg
cccaccacctactcataccagcagatcaactgtctggacagcattatacgatatctggag
agctttaatgtccctggtacagtgaagaggaagtgtggctcatcttcctgtacaacctct
tctacctctgacgatgataagcaaagggatagggatggaggtggagcaaccgaagacata
gcagagactcatgtggtgactgaggggtcaaaggttgtccctgcagcaccaggacacccc
ctaacccctctggctctgcactgcaaggcagaaagcgttgtctctgccacttcccagtgc
agtttcagcagcaccatcgttcacgttggtgacaagaagccacctgaatcagacattgtt
atgatggaggagccaccaactaccccaacaccttccacatcagctccactcactgctgtt
gcctctcccatgcccgtgaaccctcagcagacctcgtcccccactgctgctgttcctgag
aaagaaaaggagaaggagagaagaggtggaacaagtgcaggaaagggccttacgaaggcg
gtgttatccacacatacccagcaagaagagcaagccttcctcaaccgttttagagacgtc
agccagctgcggatggtccaacccagcgggccaccacagctcagaagcacgtctacacct
gggacaaaagttgtgaatagctcccagaactatccttctgtgggtaacggcaacagtcgt
cggcatggcagaggtgggaaaaggcggaaacaccaagtagatggcaacattccggacatt
ccctccctctctggatctggtccctatagaggatctaatcctgcagcaatcagacccaac
atcccctcagtccagcactcttccacatcttggccaccacctgcagcatcccagaccagt
ggtgctcccatgatgacctcctttccaccaggctacatgcccatgtttcccatttcgtca
cccttcttgatgcctcagatgggaacggatccttccttgcaagcaggagtccctaggttc
cccatgcaaggctttcctccagtgatgccaccagtcatgaccttcatgatgcccaactat
atgtttccacaacttggtaatccaggaccacagttgaacccagccaacttgcagctcagt
gggcaaatgcccgcccagatgaaccccttgggccagttcccttgctctattgttcaaatg
aaccctggtgatcaatcgttcaatcctgcaatagggcaattcaatccattgggctctcaa
atgaatcccactatgcctgcagtgattccccagcagttctacaacccaaatcctccgttc
attttccccaattctccatcaatgccagcaggaaatgccaacactacaacacatggacag
tctcgttctagcacaccccagtccaccgggcaacaggctggtgagagggaaggggcagga
tcccctctgtttcagtcccgatgctcctccccactcaatcttctacaacttgaggaattg
cctagcaacagaacagatgctacgcaacagactccacccccaggaggtggcgcaacacaa
gggggcgggattgtggtgcagaattccagcaatcgcagcaacaccaaagatgccaaacta
aacaacagccatgaagtcaatgagtccaaccaggatgccatgtcgacctccagtgacatg
ctggacctactgctgcaagaggattcccgctcaggcactggctccgccgcctcaggctct
gggtcgtctgggtctgggtctgggtcattcgcctctggatcgaatgggtgtagcacatct
ggaagtggcacatctggaagtggcacaaggagcagtaatactagcaagtactttggaagc
attgactcgtcagagaatgatcacactcataaaccagcatctggagatctggaaggggaa
cagttcataaagtttgtcctgcaggaccccatctggctcctcatggccaacacagatgac
aaggtcatgatgacataccagattcccatcaaagacagagattcggtactgaaagaagac
agagacgccctgaaagctgttcagaaacatcagcctcactttactgaagagcagacgaaa
gagttaactcaggtccacccatggattcaaaccggctgcctaccaaaagccatcaacatt
acatcttgcacaggatgtgaatctcccccagattcctcgattcttcctccattcgatttg
gactttcatgagatggatctcagcatggttttgagagaagaggccaaacaagataaactt
accactgcagaaacagcctttcccttgagccccccttcatctgataatgaacagaaagac
aatcaggccagctcgagcacttag

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