Megalobrama amblycephala (Wuchang bream): 125260050
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Entry
125260050 CDS
T08212
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha-like
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
125260050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mamb04040
]
125260050
Ion channels [BR:
mamb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125260050
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Sec62
TPR_TTI1_C
EMC3_TMCO1
Menin
DUF3043
PFF1_TM
Piezo_TM1-24
MDM10
Tim54
CDC45
BSMAP
SLC52_ribofla_tr
NPR3
ALMT
Motif
Other DBs
NCBI-GeneID:
125260050
NCBI-ProteinID:
XP_048034132
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Position
LG24:38073..48078
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AA seq
627 aa
AA seq
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MSARVRPLVPPRFLVEGVDQVTVDTEDIIEKKQTDAGTHFNTNTNNNNEEKKEKKEKKEK
KEKKKEKDEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKPKEIEVVDPAGNTYYHWLFVIT
CPVMYNWILIIARACFEELQEDFLIYWFILDFLSDVVYLCDMVFRTRTGYLEQGLLVKDE
KKLRDRYMKSIQFKLDLASMVPTDVFYFYFGLNYPEIRMNKLLRINRLFEFFQRTETRTN
FPNLFRISNLVMYIVIIIHWNACMYYSFSKAIGFGADKFVYPDITHPEYGRLVRKYAYSM
YWSTLTLTTIGETPPPVKNSEYFFVVTDFLVGVLIFATIVGNVGSMITNANAARADFQAR
IDAIKQYMSFRKVTKDLEKRVIKWFDYLWTNKKAVDEREVLNYLPGKLRAEISISVHLDT
LKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGIT
QFVVLSDGSYFGEISILNIKGSRAGNRRTANIRSIGYSDLFCLSKDDLMEALTEYPDAKA
MLEEKGRQILMKDNLLDLEVAKQGPDPKDMEEKVVKIISVLDEFQTRYARLLAEHETTQG
KLKRRVTKLEKKITDSSGVEISEMAKE
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcacgagtgaggcctctggtcccgcccagatttctcgtagagggggtggaccag
gttaccgtggacacagaggacattatagaaaaaaagcaaacagatgctggaactcacttc
aacaccaacaccaacaataacaatgaagagaaaaaagagaagaaagaaaaaaaggaaaag
aaggaaaagaaaaaagaaaaagatgagaaagagaaagaaaaagagaaagagaaagaaaaa
gaaaaggagaaagaaaaggagaaagaaaaagagaaagaaaaggagaaagagaaaccaaag
gagattgaagtcgtggatccagcaggaaacacgtactaccactggctgtttgtgatcaca
tgtcctgtgatgtataattggatcctcatcatagcaagagcttgttttgaggaattgcag
gaggacttcttgatttactggttcattttggatttcttatctgatgtggtgtatctgtgt
gacatggtgttcaggaccaggacaggttatctggagcagggtctcttggtgaaagatgag
aagaagcttcgcgatcgctacatgaagagcatccagttcaaactggacctggcctccatg
gttcccaccgacgtcttctacttttactttgggctgaactacccagagattcgcatgaac
aagctactgaggatcaatcgcttgttcgagtttttccagcgcaccgaaacacggactaac
tttccaaatctgttccgaatctccaacctcgtcatgtacatcgtgatcatcatccactgg
aacgcctgcatgtattactcgttctccaaggccattggttttggagcggataagttcgtg
tacccggatattacacatccagagtatggccggttggtgagaaagtacgcgtacagcatg
tactggtccaccctgaccctcaccaccattggtgaaactccaccacccgtcaagaactct
gagtacttctttgtggtaacagacttcctggtgggcgtgttgatttttgccaccattgtc
ggtaatgtcggttcaatgatcacgaatgcaaacgcggcacgagcagatttccaggctcgc
atcgatgctattaagcagtacatgagctttcgaaaggtcaccaaagacctagagaaacgg
gtcattaaatggtttgattacttgtggaccaacaagaaagcagtagatgagagagaagtt
ctaaattacctgccaggcaagctgagggcagagatctctataagtgtccacctggacact
ctgaagaaggtgcggatcttcgcagactgcgaggccgggctgctggtggagctggtgctg
aagcttcagccgcaggtctacagccccggagactacatctgcaagaagggtgatatcggc
cgtgagatgtacatcattaaagaagggaaactggctgtggtggccgatgatggcatcaca
cagtttgtggtgctaagtgacggcagttacttcggagagatcagcatcctcaacatcaag
ggcagtagggcagggaatcgcagaaccgccaacatccgcagcattggctattcggacctc
ttctgcctttccaaagatgacctgatggaggcactgaccgaatatccagatgccaaggcc
atgctagaggagaagggacgacaaatcctgatgaaggacaatcttctggatttggaggtg
gccaagcaaggtcccgatcccaaagacatggaggaaaaggtggtgaagatcattagcgtt
ctggatgaattccagactcgctatgcccgcctgttagccgaacacgagaccacacaaggg
aaactgaagaggcgcgtcactaaactagaaaagaagatcacagactccagcggagtggag
atctctgagatggcgaaagaataa
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