Megalobrama amblycephala (Wuchang bream): 125260086
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Entry
125260086 CDS
T08212
Symbol
ube4b
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mamb
Megalobrama amblycephala (Wuchang bream)
Pathway
mamb04120
Ubiquitin mediated proteolysis
mamb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mamb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125260086 (ube4b)
04120 Ubiquitin mediated proteolysis
125260086 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mamb04121
]
125260086 (ube4b)
Enzymes [BR:
mamb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125260086 (ube4b)
Ubiquitin system [BR:
mamb04121
]
Ubiquitin ligases (E3)
U-box type E3
125260086 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
125260086
NCBI-ProteinID:
XP_048034213
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All DBs
Position
LG24:17358261..17390342
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AA seq
1356 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGASSQPVPPAP
SHSLRTFPFSSLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRS
QSMDIDTASCEKSMSQVDVDSGIENMEVEDSDRREKRNLAEKDSSSNPDVSEEQALQLIC
KILRVSWKEQDRDVIFLPSLAAEFQKNPRDVYSDFKDLIGQILMEALMMSTRSRDCNPFA
SLTATSQPITAARSPDRHLTLIPPSSQSASPMMPCAGSFGASSLSSLYGSSPNPLALNSA
RMSAPSVPPASAAAFPVPPSPPASRPPASLPTPSPSAPLPISQRYRPYSLSSSIPISPSP
RSTPSGTLTPPTTSGIPSSPSPRHHNTQTTTPLPLLPGSPSTMARRTALAARMPSSPFSL
LFFALSDLPQDSSDEELEEEEEEDFSGVQFGSSLGASGGGMTGDSGSDRFTIESCKETEM
LNYLIERFDSVGMEERKAPKMCSQPAVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPS
LLVPYMLCRNLPYGFIQELVRMTHQEEEVFKQIFVPILQGLALAVKECSFDSDNFKFPLM
ALAELCEIKFGKTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGTFFSLSVFAEDDTK
VGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVN
RNVKKAQMQTDDKLVSTDGFMMNFLWVLQQLSMKIKLDTVDSLYVFHPKCRLNLSREETR
LNATMEDLKSWLAELHEDPSKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDL
NRTVEELKNSENQWKDSPLASRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQF
FSMVIQLILRMVEPAYPHVTLPLNPEIPKNFAALPEFYIEDVAEFLLFIVQYFPQVLYEP
CTEDIVTFLVVFLCSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMESHPLSVNQL
VPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRY
INMLINDTTFLLDESLESLKRIHEIQEEMKNKEQWDQLPREQQQSRQSQLTQDERVSRSY
LALATETVDMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGF
EPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKL
LLEKVEEIVARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSP
TDPFNRQPLTESMLEPVPELKERIQAWMREKHTGRF
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagattcgtcgaaggcggctggcccggttagccggagga
cagacatcacagcccagcacccccctcagcacccctttgacatccccacagagagagact
cccccaggacccttgccagggccatctggggcttcatcgcagcctgtcccaccagctcca
tctcactctctcaggacatttcctttctcaagcctaaatgcccaaaatgtcacccctgcc
acttctcctatgggggcctctggggttgcttaccgcagccagagcagcgagggcgtcagt
tcgctctccagctctccatctaacagcctggagacgcagtcccaatccctgtcccgctct
cagagcatggacattgacacagcctcctgcgagaagagcatgtcccaagtagatgtggac
tcagggattgagaatatggaggtggaagacagtgatcgcagagagaaaaggaacctggct
gaaaaggattcttcatccaatcctgacgtctctgaagagcaggctctgcagctcatctgt
aagatcttgcgtgtttcctggaaggaacaggaccgtgatgtcatcttcctcccctcactt
gctgctgaattccagaagaacccaagggatgtttactctgacttcaaagacctgatcgga
cagattttaatggaggctctgatgatgtccacccgttcacgtgactgtaacccattcgcc
agcttgaccgccacatctcagccaattactgctgccagatccccagaccgtcacctgact
ctcatcccaccctccagccagagcgccagtcccatgatgccctgtgctggttcatttggt
gccagctcactttccagtctttacggtagtagcccaaacccacttgctctgaactctgcc
agaatgagtgctccatctgtcccaccggcttctgcagccgccttcccggttccccccagt
cctccagcctctcgccctcctgccagccttccaactccctctccatccgccccactgccc
atctcccagagatacaggccctactcccttagctcttccatccccataagcccaagcccc
agatctactccatctggtacgcttacaccccctacaacttcaggtataccctccagccct
tcccccagacaccataacacccaaaccaccacacctttacccctcctccccggctccccc
agcactatggccagacggactgcactagctgcccggatgccttctagccctttctccctc
ctcttcttcgccctgtccgacttacctcaggacagcagtgatgaagagctggaggaagag
gaagaggaggatttttcaggggttcagtttgggtccagcctgggtgcatccggagggggg
atgactggtgactcaggtagtgaccgctttactatagagtcctgtaaagagacggagatg
ctcaactacctcatcgagcgttttgacagtgtgggaatggaagagaggaaggccccaaag
atgtgcagccaaccagctgtcagtcagctgcttagcaacattcgttcccagtgcatttcc
catgctgcactagtgcttcaaggtgccctcacacagcccagggcccctctgcagccctcc
ctgctggttccctacatgctgtgccggaaccttccatacgggttcatccaggagttggtg
cgcatgactcaccaggaggaggaggtgttcaaacagatctttgttcccattcttcaaggg
cttgctttagctgtaaaagaatgttcttttgacagtgacaacttcaagtttcctctgatg
gctttggctgagctctgtgaaatcaagttcgggaagactcaccctgtatgcaatttgatc
acctctctgccattgtggtgtcctgaccctctcagtcctgggacaggaagagaaattcaa
agactgtccttcctcggaacgttcttcagtctttctgtgtttgctgaggatgacactaaa
gtgggagacaagtacttctctggccctgccatcactatggagaacacccgtgtggtcagc
cagtcactgcagcattatctggagtctgccaggggagatctgtttaaaatcctgcacaac
atcttattgaatggagagacaagggaagcagctttgagctacatggcagctctggtgaat
cgtaatgtgaaaaaggctcagatgcagaccgatgataagctggtgtccacagacggcttc
atgatgaacttcctgtgggttctgcagcaactcagtatgaagataaagctggatacggtg
gattctctctacgtcttccaccccaagtgtcggctgaatctcagccgagaagagacccgg
ctcaatgccacgatggaggacctgaagagctggctcgccgagctgcatgaagacccgtcc
aagttctcagagccaaagttccctacagagtgcttcttcttaacgcttcacgcacatcat
ttgtccatccttccgtgctgtcggcgctacatacggagactgagggccatcagggatctg
aacagaactgtggaggagctgaagaacagtgagaaccagtggaaggattccccgttggct
agtcgtcatcgggagatgctgaagagatgtaaaacacaactgaagaaacttgtgcgctct
aaagcctgcgcagacgcagggctgctggacgagaacctgctgcgcagatgtcttcagttc
ttcagtatggtcatccagctcatcttgcgtatggtggagcctgcctacccacacgtaacc
ctgcctctgaatccagaaattcccaaaaactttgcagcactgccggagttttacattgaa
gatgtggctgagttcttgctttttattgtgcagtactttccccaggttctctatgagccg
tgcactgaagacattgtgaccttcctggtagtcttcctttgcagtcagaattacataaag
aacccatacttgattgccaagctggtggaggtgctgttcgttaccaacccagcggtgcag
ccgcgcactcagcgtttctttgagatgatggagagccacccactgtctgtcaatcagctt
gttcccgccctcatgaagttctacacagatgtggagcacactggagccacaagcgagttc
tatgacaagttcaccatccgttaccacatcagcaccatattcaaaagcctgtggcaaaac
attaaccatcaaggcaccttcctggaggagttcaactccgggaaacagtttgtgcgctac
atcaacatgctaattaacgatacaacttttctgctggatgagagtttggagtctttgaaa
cgcatccatgagatccaagaggagatgaagaataaagagcaatgggaccagctgcccagg
gagcagcagcagagccgtcagtcccagctgactcaggatgagagagtatcacgatcctac
ctggctttagccacagagacagtggatatgttccatatcctcaccaaacaggtccagaag
cccttcctcaggcctgaactgggtcctcgtctggctgccatgttgaattacaacctacag
cagctatgtgggcctaaatgtcgagacttgaaggtggaaaacccagaaaaatacggtttt
gagccaaagaagctcctggatcagctcactgatatctacctgcagctggactgtgcccga
tttgctaaagctattgcagatgaccagcggtcatacagcagggagctctttgaggaggtc
atttccaaaatgagaaaggcgggcataaaatccaccattgctattgagaaattcaaactt
ctgttggagaaggtggaggagatagtagctcgcaattctcagtctgagatggattacagc
gacgccccggatgagtttaaagatccgctgatggacacccttatgactgatcccgtgcaa
cttccatctggcaacatcatggaccgatccatcattctgcgacacctcctgaactctccc
accgatcccttcaacagacagcctctcacagagagcatgctggaaccagtcccagagctg
aaggagcgtatccaggcctggatgagagagaagcatactggtcgcttttga
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